scholarly journals Recurrent neural network-based acute concussion classifier using raw resting state EEG data

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Karun Thanjavur ◽  
Arif Babul ◽  
Brandon Foran ◽  
Maya Bielecki ◽  
Adam Gilchrist ◽  
...  

AbstractConcussion is a global health concern. Despite its high prevalence, a sound understanding of the mechanisms underlying this type of diffuse brain injury remains elusive. It is, however, well established that concussions cause significant functional deficits; that children and youths are disproportionately affected and have longer recovery time than adults; and that individuals suffering from a concussion are more prone to experience additional concussions, with each successive injury increasing the risk of long term neurological and mental health complications. Currently, the most significant challenge in concussion management is the lack of objective, clinically- accepted, brain-based approaches for determining whether an athlete has suffered a concussion. Here, we report on our efforts to address this challenge. Specifically, we introduce a deep learning long short-term memory (LSTM)-based recurrent neural network that is able to distinguish between non-concussed and acute post-concussed adolescent athletes using only short (i.e. 90 s long) samples of resting state EEG data as input. The athletes were neither required to perform a specific task nor expected to respond to a stimulus during data collection. The acquired EEG data were neither filtered, cleaned of artefacts, nor subjected to explicit feature extraction. The LSTM network was trained and validated using data from 27 male, adolescent athletes with sports related concussion, benchmarked against 35 non-concussed adolescent athletes. During rigorous testing, the classifier consistently identified concussions with an accuracy of > 90% and achieved an ensemble median Area Under the Receiver Operating Characteristic Curve (ROC/AUC) equal to 0.971. This is the first instance of a high-performing classifier that relies only on easy-to-acquire resting state, raw EEG data. Our concussion classifier represents a promising first step towards the development of an easy-to-use, objective, brain-based, automatic classification of concussion at an individual level.

2020 ◽  
Author(s):  
Karun Thanjavur ◽  
Arif Babul ◽  
Brandon Foran ◽  
Maya Bielecki ◽  
Adam Gilchrist ◽  
...  

ABSTRACTConcussion is a global health concern. Despite its high prevalence, a sound understanding of the mechanisms underlying this type of diffuse brain injury remains elusive. It is, however, well established that concussions cause significant functional deficits; that children and youths are disproportionately affected and have longer recovery time than adults; and recovering individuals are more prone to suffer additional concussions, with each successive injury increasing the risk of long term neurological and mental health complications. Currently, concussion management faces two significant challenges: there are no objective, clinically accepted, brain-based approaches for determining (i) whether an athlete has suffered a concussion, and (ii) when the athlete has recovered. Diagnosis is based on clinical testing and self-reporting of symptoms and their severity. Self-reporting is highly subjective and symptoms only indirectly reflect the underlying brain injury. Here, we introduce a deep learning Long Short Term Memory (LSTM)-based recurrent neural network that is able to distinguish between healthy and acute post-concussed adolescent athletes using only a short (i.e. 90 seconds long) sample of resting state EEG data as input. The athletes were neither required to perform a specific task nor subjected to a stimulus during data collection, and the acquired EEG data was neither filtered, cleaned of artefacts, nor subjected to explicit feature extraction. The LSTM network was trained and tested on data from 27 male, adolescent athletes with sports related concussion, bench marked against 35 healthy, adolescent athletes. During rigorous testing, the classifier consistently identified concussions with an accuracy of >90% and its ensemble-median Area Under the Curve (AUC) corresponds to 0.971. This is the first instance of a high-performing classifier that relies only on easy-to-acquire resting state EEG data. It represents a key step towards the development of an easy-to-use, brain-based, automatic classification of concussion at an individual level.


2021 ◽  
Vol 15 ◽  
Author(s):  
Karun Thanjavur ◽  
Dionissios T. Hristopulos ◽  
Arif Babul ◽  
Kwang Moo Yi ◽  
Naznin Virji-Babul

Artificial neural networks (ANNs) are showing increasing promise as decision support tools in medicine and particularly in neuroscience and neuroimaging. Recently, there has been increasing work on using neural networks to classify individuals with concussion using electroencephalography (EEG) data. However, to date the need for research grade equipment has limited the applications to clinical environments. We recently developed a deep learning long short-term memory (LSTM) based recurrent neural network to classify concussion using raw, resting state data using 64 EEG channels and achieved high accuracy in classifying concussion. Here, we report on our efforts to develop a clinically practical system using a minimal subset of EEG sensors. EEG data from 23 athletes who had suffered a sport-related concussion and 35 non-concussed, control athletes were used for this study. We tested and ranked each of the original 64 channels based on its contribution toward the concussion classification performed by the original LSTM network. The top scoring channels were used to train and test a network with the same architecture as the previously trained network. We found that with only six of the top scoring channels the classifier identified concussions with an accuracy of 94%. These results show that it is possible to classify concussion using raw, resting state data from a small number of EEG sensors, constituting a first step toward developing portable, easy to use EEG systems that can be used in a clinical setting.


Author(s):  
Yanjie Dong ◽  
John Polak ◽  
Aruna Sivakumar ◽  
Fangce Guo

With the growing popularity of mobile and sensory devices, there has been a strong research interest in short-term disaggregate-level location prediction. Such predictive models have huge application potential in several sectors to change and improve people’s daily life and experience. Existing methods in this research stream have mainly focused on the prediction of sequence of location, with valuable temporal information overlooked. In addition, data limitations have constrained the development and understanding from different algorithms. In this paper, the authors propose a recurrent neural network-based method (RNN and LSTM, long short-term memory) for the next and future location prediction. This model predicts the sequence in time, thus it can predict both when and where an individual will be in the future and the duration of the stay at each location. The predictive model is developed based on an agent-based simulation platform that can produce realistic spatial-temporal trajectory data at the individual level. Analysis of the simulated data has shown that RNN and LSTM are capable of predicting future locations with better results than other comparative methods, especially for agents with high location variability. Online prediction with true location information fed into the model later in the day would greatly improve the predicted results. However, significant variations can be observed at the zonal level, with all methods performing much better on frequently visited locations than less visited locations or irregular visits.


2021 ◽  
pp. 1-11
Author(s):  
Sang-Ki Jeong ◽  
Dea-Hyeong Ji ◽  
Ji-Youn Oh ◽  
Jung-Min Seo ◽  
Hyeung-Sik Choi

In this study, to effectively control small unmanned surface vehicles (USVs) for marine research, characteristics of ocean current were learned using the long short-term memory (LSTM) model algorithm of a recurrent neural network (RNN), and ocean currents were predicted. Using the results, a study on the control of USVs was conducted. A control system model of a small USV equipped with two rear thrusters and a front thruster arranged horizontally was designed. The system was also designed to determine the output of the controller by predicting the speed of the following currents and utilizing this data as a system disturbance by learning data from ocean currents using the LSTM algorithm of a RNN. To measure ocean currents on the sea when a small USV moves, the speed and direction of the ship’s movement were measured using speed, azimuth, and location (latitude and longitude) data from GPS. In addition, the movement speed of the fluid with flow velocity is measured using the installed flow velocity measurement sensor. Additionally, a control system was designed to control the movement of the USV using an artificial neural network-PID (ANN-PID) controller [12]. The ANN-PID controller can manage disturbances by adjusting the control gain. Based on these studies, the control results were analyzed, and the control algorithm was verified through a simulation of the applied control system [8, 9].


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