scholarly journals Fourier transform infrared spectroscopy coupled with machine learning classification for identification of oxidative damage in freeze-dried heart valves

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Dejia Liu ◽  
Sükrü Caliskan ◽  
Bita Rashidfarokhi ◽  
Harriëtte Oldenhof ◽  
Klaus Jung ◽  
...  

AbstractFreeze-drying can be used to ensure off-the-shelf availability of decellularized heart valves for cardiovascular surgery. In this study, decellularized porcine aortic heart valves were analyzed by nitroblue tetrazolium (NBT) staining and Fourier transform infrared spectroscopy (FTIR) to identify oxidative damage during freeze-drying and subsequent storage as well as after treatment with H2O2 and FeCl3. NBT staining revealed that sucrose at a concentration of at least 40% (w/v) is needed to prevent oxidative damage during freeze-drying. Dried specimens that were stored at 4 °C depict little to no oxidative damage during storage for up to 2 months. FTIR analysis shows that fresh control, freeze-dried and stored heart valve specimens cannot be distinguished from one another, whereas H2O2- and FeCl3-treated samples could be distinguished in some tissue section. A feed forward artificial neural network model could accurately classify H2O2 and FeCl3 treated samples. However, fresh control, freeze-dried and stored samples could not be distinguished from one another, which implies that these groups are very similar in terms of their biomolecular fingerprints. Taken together, we conclude that sucrose can minimize oxidative damage caused by freeze-drying, and that subsequent dried storage has little effects on the overall biochemical composition of heart valve scaffolds.

HortScience ◽  
1996 ◽  
Vol 31 (4) ◽  
pp. 619e-619
Author(s):  
Alvan Gaus ◽  
Cecil Stushnoff ◽  
Ann McSay

Proper identification of apple rootstocks has always been a problem for nurseries and fruit growers. There needs to be a rapid, inexpensive, and repeatable protocol for identification of apple rootstocks. Fourier transform infrared spectroscopy (FTIR), an analytical chemical technique based on infrared laser characterization of molecular bonding energies for biochemical compounds, such as proteins, may provide an answer. Several rootstocks from the 1984 NC-140 apple rootstock trial were compared. Using a BioRad research spectrometer, spectra derived from 1000 scans per freeze dried sample were used to compare the rootstocks. Using Hit Quality Indices (HQI) generated by Lab Calc software, the rootstocks M.7 EMLA, B.9, and a seedling rootstock were compared with themselves, and each of the other two samples. A perfect match gives a HQI of zero. It was found that root cortex tissue could be used to separate these rootstocks from each other, but root xylem tissue was a poor tissue to use for identification.


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