Examining the base stacking interaction in a dinucleotide context via reversible cyclobutane dimer analogue formation under UV irradiation

Degang Liu; Lei Li

doi:10.1039/c3ra41702f

Examining the base stacking interaction in a dinucleotide context via reversible cyclobutane dimer analogue formation under UV irradiation

RSC Advances ◽

10.1039/c3ra41702f ◽

2013 ◽

Vol 3 (42) ◽

pp. 19545 ◽

Cited By ~ 1

Author(s):

Degang Liu ◽

Lei Li

Keyword(s):

Uv Irradiation ◽

Base Stacking ◽

Stacking Interaction ◽

Cyclobutane Dimer

A Single-Molecule Investigation on Interfacial Base-Stacking Interaction using a Centrifuge Force Microscope

Biophysical Journal ◽

10.1016/j.bpj.2018.11.1500 ◽

2019 ◽

Vol 116 (3) ◽

pp. 277a

Author(s):

Jibin Abraham Punnoose

Keyword(s):

Single Molecule ◽

Base Stacking ◽

Stacking Interaction

Proton magnetic resonance studies of ribose dinucleoside monophosphates in aqueous solution. I. Nature of the base-stacking interaction in adenylyl(3'->5')adenosine

Journal of the American Chemical Society ◽

10.1021/ja01029a033 ◽

1969 ◽

Vol 91 (1) ◽

pp. 168-183 ◽

Cited By ~ 139

Author(s):

Sunney I. Chan ◽

James Henry Nelson

Keyword(s):

Aqueous Solution ◽

Magnetic Resonance ◽

Proton Magnetic Resonance ◽

Base Stacking ◽

Magnetic Resonance Studies ◽

Stacking Interaction ◽

Dinucleoside Monophosphates

Die NMR-spektroskopische Strukturaufklärung des bei der UV-Bestrahlung von Thymin/Uracil-Gemischen in der Eismatrix entstehenden Thymin/Uracil-Mischdimeren / NMR Spectroscopic Structure Elucidation of Thymine/Uracil Mixed Dimer Prepared by UV Irradiation of Thymine/Uracil Mixtures in Ice Matrix

Zeitschrift für Naturforschung B ◽

10.1515/znb-1974-5-625 ◽

1974 ◽

Vol 29 (5-6) ◽

pp. 410-413 ◽

Cited By ~ 5

Author(s):

Egon Fahr ◽

Reinhard Pastille ◽

Norbert Pelz ◽

Dieter Scheutzow

Keyword(s):

Uv Irradiation ◽

Structure Elucidation ◽

Cyclobutane Dimer ◽

Fractionated Crystallization

The thymine/uracil mixed dimer, formed by UV irradiation of thymine/uracil mixtures in ice matrix was isolated by fractionated crystallization. The cis/syn structure of this cyclobutane dimer was established by NMR investigation.

ChemInform Abstract: BASE-BASE INTERACTION IN NUCLEIC ACIDS PART 9, THE EFFECT OF 3,3′-SUBSTITUTION ON SOLUTION-PHASE PHOTODIMERIZATION AND BASE-STACKING INTERACTION OF 1,1′-TRIMETHYLENBIS-5-ALKYLURACILS

Chemischer Informationsdienst ◽

10.1002/chin.197516293 ◽

1975 ◽

Vol 6 (16) ◽

pp. no-no

Author(s):

K. GOLANKIEWICZ ◽

A. ZASADA-PARZYNSKA

Keyword(s):

Nucleic Acids ◽

Solution Phase ◽

Base Stacking ◽

Base Interaction ◽

Stacking Interaction

Determination of Base Binding Strength and Base Stacking Interaction of DNA Duplex Using Atomic Force Microscope

Scientific Reports ◽

10.1038/srep09143 ◽

2015 ◽

Vol 5 (1) ◽

Cited By ~ 13

Author(s):

Tian-biao Zhang ◽

Chang-lin Zhang ◽

Zai-li Dong ◽

Yi-fu Guan

Keyword(s):

Atomic Force Microscope ◽

Dna Duplex ◽

Base Stacking ◽

Binding Strength ◽

Stacking Interaction ◽

Atomic Force

Impact of Geometry Optimization on Base–Base Stacking Interaction Energies in the Canonical A- and B-Forms of DNA

The Journal of Physical Chemistry A ◽

10.1021/jp308364d ◽

2013 ◽

Vol 117 (7) ◽

pp. 1560-1568 ◽

Cited By ~ 10

Author(s):

Ashley Ringer McDonald ◽

Elizabeth J. Denning ◽

Alexander D. MacKerell

Keyword(s):

Geometry Optimization ◽

Interaction Energies ◽

Base Stacking ◽

Stacking Interaction

Proton magnetic resonance studies of ribose dinucleoside monophosphates in aqueous solution. II. Nature of the base-stacking interaction in adenylyl-(3' .far. 5')-cytidine and cytidylyl-(3' .far. 5')adenosine

Journal of the American Chemical Society ◽

10.1021/ja01042a039 ◽

1969 ◽

Vol 91 (14) ◽

pp. 3910-3921 ◽

Cited By ~ 74

Author(s):

Benedict W. Bangerter ◽

Sunney I. Chan

Keyword(s):

Aqueous Solution ◽

Magnetic Resonance ◽

Proton Magnetic Resonance ◽

Base Stacking ◽

Magnetic Resonance Studies ◽

Stacking Interaction ◽

Dinucleoside Monophosphates

Enhancement of aromatic amino acid-nucleic acid base stacking interaction by metal coordination to base: fluorescence study on a tryptophan-Pt(II)-guanine ternary complex

FEBS Letters ◽

10.1016/0014-5793(95)00824-s ◽

1995 ◽

Vol 370 (3) ◽

pp. 193-196 ◽

Cited By ~ 8

Author(s):

Hisahiro Kawai ◽

Mariko Tarui ◽

Mitsunobo Doi ◽

Toshimasa Ishida

Keyword(s):

Amino Acid ◽

Nucleic Acid ◽

Aromatic Amino Acid ◽

Ternary Complex ◽

Metal Coordination ◽

Fluorescence Study ◽

Base Stacking ◽

Acid Base ◽

Stacking Interaction ◽

Nucleic Acid Base

Photosynthetic acclimation to elevated atmospheric carbon dioxide and UV irradiation in Pinus banksiana

Physiologia Plantarum ◽

10.1034/j.1399-3054.1993.880315.x ◽

1993 ◽

Vol 88 (3) ◽

pp. 493-500 ◽

Cited By ~ 2

Author(s):

James D. Stewart ◽

John Hoddinott

Keyword(s):

Carbon Dioxide ◽

Uv Irradiation ◽

Pinus Banksiana ◽

Atmospheric Carbon Dioxide ◽

Photosynthetic Acclimation ◽

Elevated Atmospheric Carbon Dioxide ◽

Atmospheric Carbon

Wavelength-specific Activation of MAP Kinase Family Proteins by Monochromatic UV Irradiation¶

Photochemistry and Photobiology ◽

10.1562/0031-8655(2001)073<0147:wsaomk>2.0.co;2 ◽

2001 ◽

Vol 73 (2) ◽

pp. 147 ◽

Cited By ~ 23

Author(s):

Yukihito Kabuyama ◽

Miwako K. Homma ◽

Masayuki Sekimata ◽

Yoshimi Homma

Keyword(s):

Map Kinase ◽

Uv Irradiation ◽

Kinase Family