scholarly journals In situ 13CO2 pulse-labelling of upland grassland demonstrates a rapid pathway of carbon flux from arbuscular mycorrhizal mycelia to the soil

2002 ◽  
Vol 153 (2) ◽  
pp. 327-334 ◽  
Author(s):  
D. Johnson ◽  
J. R. Leake ◽  
N. Ostle ◽  
P. Ineson ◽  
D. J. Read
2006 ◽  
Vol 287 (1-2) ◽  
pp. 301-311 ◽  
Author(s):  
Bente Foereid ◽  
Lorna A. Dawson ◽  
David Johnson ◽  
J. Ignacio Rangel-Castro

2008 ◽  
Vol 54 (No. 11) ◽  
pp. 498-508 ◽  
Author(s):  
M.C. Pagano

<I>Centrolobium tomentosum</I> is a tropical legume tree indicated for functional and structural restoration of riparian areas. This study was conducted to characterize the rhizobia isolated from nodules of <I>C. tomentosum in situ</I> and to determine their capacity of renodulation, in an experimental area of land rehabilitation in the Rio Doce valley. Nodulation potential to inoculation with 2 selected fast-growing <I>Rhizobium</I> strains separately and a mixed inoculum of arbuscular mycorrhizal fungi was evaluated by the use of antibiotics resistance. Flood disturbance were observed not to affect renodulation by fast-growing strains. DNA fingerprinting RAPD (random amplified polymorphic DNA) and lipopolysaccharides (LPS) profiles were used to examine molecular relationships among field isolates, inoculants and reference strains. Maximal renodulation was exhibited by strain BHCBAb1 after 24 months after transplantation. <I>Centrolobium tomentosum</I> forms symbiosis with fast- and slow-growing <I>Rhizobium</I> strains, and it is suggested that their nursery culture could be improved by inoculation of selected strain under low nitrogen-input conditions.


Geoderma ◽  
2020 ◽  
Vol 378 ◽  
pp. 114617
Author(s):  
Chenyang Xu ◽  
John J. Qu ◽  
Xianjun Hao ◽  
Zhiliang Zhu ◽  
Laurel Gutenberg

2008 ◽  
Vol 45 (8) ◽  
pp. 1155-1165 ◽  
Author(s):  
Pascale M.A. Seddas ◽  
Christine Arnould ◽  
Marie Tollot ◽  
Cecilia M. Arias ◽  
Vivienne Gianinazzi-Pearson

2006 ◽  
Vol 33 (2) ◽  
pp. 152-175 ◽  
Author(s):  
Jonathan R. Leake ◽  
Nick J. Ostle ◽  
J. Ignacio Rangel-Castro ◽  
David Johnson

2020 ◽  
Author(s):  
Ran You ◽  
Lei Wang ◽  
Congrong Shi ◽  
Hao Chen ◽  
Shasha Zhang ◽  
...  

Abstract Background: The biosynthesis of high value-added compounds using metabolically engineered strains has received wide attention in recent years. Myo-inositol (inositol), an important compound in the pharmaceutics, cosmetics and food industries, is usually produced from phytate via a harsh set of chemical reactions. Recombinant Escherichia coli strains have been constructed by metabolic engineering strategies to produce inositol, but with a low yield. The proper distribution of carbon flux between cell growth and inositol production is a major challenge for constructing an efficient inositol-synthesis pathway in bacteria. Construction of metabolically engineered E. coli strains with high stoichiometric yield of inositol is desirable.Results: In the present study, we designed an inositol-synthesis pathway from glucose with a theoretical stoichiometric yield of 1 mol inositol/mol glucose. Recombinant E. coli strains with high stoichiometric yield (>0.7 mol inositol/mol glucose) were obtained. Inositol was successfully biosynthesized after introducing two crucial enzymes: inositol-3-phosphate synthase (IPS) from Trypanosoma brucei, and inositol monophosphatase (IMP) from E. coli. Based on starting strains E. coli BW25113 (wild-type) and SG104 (ΔptsG::glk, ΔgalR::zglf, ΔpoxB::acs), a series of engineered strains for inositol production was constructed by deleting the key genes pgi, pfkA and pykF. Plasmid-based expression systems for IPS and IMP were optimized, and expression of the gene zwf was regulated to enhance the stoichiometric yield of inositol. The highest stoichiometric yield (0.96 mol inositol/mol glucose) was achieved from recombinant strain R15 (SG104, Δpgi, Δpgm, and RBSL5-zwf). Strain R04 (SG104 and Δpgi) reached high-density in a 1-L fermenter when using glucose and glycerol as a mixed carbon source. In scaled-up fed-batch bioconversion in situ using strain R04, 0.82 mol inositol/mol glucose was produced within 23 h, corresponding to a titer of 106.3 g/L (590.5 mM) inositol.Conclusions: The biosynthesis of inositol from glucose in recombinant E. coli was optimized by metabolic engineering strategies. The metabolically engineered E. coli strains represent a promising method for future inositol production. This study provides an essential reference to obtain a suitable distribution of carbon flux between glycolysis and inositol synthesis.


2020 ◽  
Author(s):  
Margaret Mars Brisbin ◽  
Otis Davey Brunner ◽  
Mary Matilda Grossmann ◽  
Satoshi Mitarai

AbstractAcantharians are important contributors to surface primary production and to carbon flux to the deep sea, but are often underestimated because their delicate structures are destroyed by plankton nets or dissolved by preservatives. As a result, relatively little is known about acantharian biology, especially regarding their life cycles. Here, we take a paired approach, bringing together high-throughput, in-situ imaging and high-throughput sequencing, to investigate acantharian abundance, vertical distribution, and life-history in the western North Pacific. Observed concentrations of acantharian cells correlated well with sequence abundances from acantharians with known, recognizable morphologies, but not to sequences from those without known morphology (basal environmental clades). These results suggest basal clades may lack characteristic star-shaped skeletons or are much smaller than known acantharians. The decreased size-range of acantharians imaged at depth supports current hypotheses regarding asymbiotic acantharian life cycles: cysts or vegetative cells release reproductive swarmer cells at depth and juvenile cells grow as they ascend towards the surface. Moreover, sequencing data present the possibility that photosymbiotic acantharians also reproduce at depth, like their asymbiotic, encysting relatives, which is counter to previous hypotheses. Finally, in-situ imaging captured a new acantharian behavior that may be a previously undescribed predation strategy.


Sign in / Sign up

Export Citation Format

Share Document