Fitting genetic mapping functions based on sperm typing: results for three chromosomal segments in cattle

1998 ◽  
Vol 29 (6) ◽  
pp. 425-434 ◽  
Author(s):  
C. Windemuth ◽  
H. Simianer ◽  
S. Lien
Genetics ◽  
1979 ◽  
Vol 91 (4) ◽  
pp. 769-775
Author(s):  
Joseph Felsenstein

ABSTRACT By extension of the argument of KOSAMBI (1944), a family of mapping functions can be derived, which has a parameter regulating the intensity of interference. Different values of this parameter yield the HALDANE (1919) and KOSAMBI mapping functions as special cases. The parameter is the coincidence coefficient for nearby small intervals. The family includes mapping functions for negative interference. A simple rule for combining recombination fractions in adjacent intervals is also obtained.


Genomics ◽  
1992 ◽  
Vol 13 (1) ◽  
pp. 44-48 ◽  
Author(s):  
Harris A. Lewin ◽  
Karin Schmitt ◽  
Rene Hubert ◽  
Michiel J.T. van Eijk ◽  
Norman Arnheim

2009 ◽  
Vol 22 (2) ◽  
pp. 105-115 ◽  
Author(s):  
N. ARNHEIM ◽  
H. LI ◽  
X. CUI
Keyword(s):  

Genomics ◽  
1995 ◽  
Vol 27 (1) ◽  
pp. 113-118 ◽  
Author(s):  
Chankyu Park ◽  
Ingolf Russ ◽  
Yang Da ◽  
Harris A. Lewin

Genome ◽  
2011 ◽  
Vol 54 (3) ◽  
pp. 196-201 ◽  
Author(s):  
Manfred Huehn

The estimation of recombination frequencies is a crucial step in genetic mapping. For the construction of linkage maps, nonadditive recombination fractions must be transformed into additive map distances. Two of the most commonly used transformations are Kosambi’s and Haldane’s mapping functions. This paper reports on the calculation of the bias associated with estimation of recombination fractions, Kosambi’s distances, and Haldane’s distances. I calculated absolute and relative biases numerically for a wide range of recombination fractions and sample sizes. I assumed that the ratio of recombinant gametes to the total number of gametes can be adequately represented by a binomial function. I found that the bias in recombination fraction estimates is negative, i.e., the estimator is an underestimate. However, significant values were only obtained when recombination fractions were large and sample sizes were small. The relevant estimates of recombination fractions were, therefore, nearly unbiased. Haldane’s and Kosambi’s distances were found to be strongly biased, with positive bias for the most interesting values of recombination fractions and sample sizes. The bias of Kosambi’s distance was considerably smaller than the bias of Haldane’s distance.


2011 ◽  
Vol 37 (10) ◽  
pp. 1779-1784
Author(s):  
Ming-Jing ZHOU ◽  
Yong WEN ◽  
Shuang-Cheng LI ◽  
Cheng-Bo LI ◽  
Man-Hua ZHANG ◽  
...  

Genetics ◽  
1987 ◽  
Vol 116 (4) ◽  
pp. 513-521
Author(s):  
Nancy J Trun ◽  
Thomas J Silhavy

ABSTRACT The prlC gene of E. coli was originally identified as an allele, prlC1, which suppresses certain signal sequence mutations in the genes for several exported proteins. We have isolated six new alleles of prlC that also confer this phenotype. These mutations can be placed into three classes based on the degree to which they suppress the lamBsignal sequence deletion, lamBs78. Genetic mapping reveals that the physical location of the mutations in prlC correlates with the strength of the suppression, suggesting that different regions of the gene can be altered to yield a suppressor phenotype. We also describe an in vivo cloning procedure using λplacMu9H. The procedure relies on transposition and illegitimate recombination to generate a specialized transducing phage that carries prlC1. This method should be applicable to any gene for which there is a mutant phenotype.


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