Genetic variation in the mitochondrial and nuclear DNA of the Japanese conger Conger myriaster

2001 ◽  
Vol 67 (6) ◽  
pp. 1081-1087 ◽  
Author(s):  
Satoshi Ishikawa, ◽  
Yobuo Kimura, ◽  
Tadashi Tokai, ◽  
Katsumi Tsukamoto ◽  
Mutsumi Nishida
2008 ◽  
Vol 102 (2) ◽  
pp. 195-205 ◽  
Author(s):  
Li-Jiang Hu ◽  
Kentaro Uchiyama ◽  
Hai-Long Shen ◽  
Yoko Saito ◽  
Yoshiaki Tsuda ◽  
...  

2002 ◽  
Vol 68 (6) ◽  
pp. 1219-1225 ◽  
Author(s):  
TOYOKAZU FURUKAWA ◽  
OSAMU NAKAMURA ◽  
YUKIYA SUZUKI ◽  
SHIZUO ATSUTA ◽  
HIROAKI NAKAMURA ◽  
...  

2003 ◽  
Vol 69 (1) ◽  
pp. 181-188 ◽  
Author(s):  
TOMOKO UTOH ◽  
NORIYUKI HORIE ◽  
AKIHIRO OKAMURA ◽  
YOSHIAKI YAMADA ◽  
SATORU TANAKA ◽  
...  

2011 ◽  
Vol 83 (3) ◽  
pp. 993-1006 ◽  
Author(s):  
Patrícia M.O. Pierre ◽  
Saulo M. Sousa ◽  
Lisete C. Davide ◽  
Marco A. Machado ◽  
Lyderson F. Viccini

Cytogenetic analyses, of pollen viability, nuclear DNA content and RAPD markers were employed to study three chemotypes of Lippia alba (Mill.) (Verbenaceae) in order to understand the genetic variation among them. Different ploidy levels and mixoploid individuals were observed. This work comprises the first report of different chromosome numbers (cytotypes) in L. alba. The chromosome numbers of La2-carvone and La3-linalool chemotypes suggested that they are polyploids. Flow cytometric analysis showed an increase of nuclear DNA content that was not directly proportional to ploidy level variation. A cluster analysis based on RAPD markers revealed that La3-linalool shares genetic markers with La1-citral and La2-carvone. The analysis showed that the majority of genetic variation of La3-linalool could be a consequence of ixoploidy. ur data indicates that sexual reproduction aong those three chemotypes is unlikely and suggests the beginning of reproductive isolation. The results demonstrated that chromosome analysis, nuclear DNA content estimation and RAPD markers constitute excellent tools for detecting genetic variation among L. alba chemotypes.


CYTOLOGIA ◽  
2007 ◽  
Vol 72 (3) ◽  
pp. 243-249 ◽  
Author(s):  
Budiguppe K. Chikkaswamy ◽  
Rabin C. Paramanik ◽  
Nagaraja Varadaraj ◽  
Achinto Paramanik ◽  
Hyadala L. Ramesh ◽  
...  

2011 ◽  
Vol 101 (4) ◽  
pp. 467-475 ◽  
Author(s):  
D. Chu ◽  
C.S. Gao ◽  
P. De Barro ◽  
F.H. Wan ◽  
Y.J. Zhang

AbstractIt is often considered that reduced genetic variation due to bottlenecks and founder effects limits the capacity for species to establish in new environments and subsequently spread. The recent invasion (during the past five years) of an alien whitefly, one member of Bemisia tabaci cryptic species complex, referred to as Mediterranean (herein referred to as Q-type) in Shandong Province, China, provides an ideal opportunity to study the changes in genetic variation between its home range in the Mediterranean region and its invasion range. Using both the mitochondrial cytochrome oxidase I (mtCOI) and nuclear (microsatellite) DNA, we show that Q in Shandong likely originated in the western Mediterranean. We also found that the haplotype diversity was low compared with its presumed geographic origin, whereas microsatellite allele diversity showed no such decline. A key factor in invasions is the establishment of females and so bottleneck and founder events can lead to a very rapid and considerable loss of mitochondrial diversity. The lack of haplotype diversity in Shandong supports the interpretation that, at one or more points between the western Mediterranean and China, the invading Q lost haplotype diversity, most probably through the serial process of establishment and redistribution through trade in ornamental plants. However, the loss in haplotype diversity does not necessarily mean that nuclear allelic diversity should also decline. Provided females can mate freely with whichever males are available, allelic diversity can be maintained or even increased relative to the origin of the invader. Our findings may offer some explanation to the apparent paradox between the concept of reduced genetic variation limiting adaptation to new environments and the observed low diversity in successful invaders.


2019 ◽  
Vol 113 (3) ◽  
pp. 149-159
Author(s):  
Atsalek Rattanawannee ◽  
Kanyanat Wongsa ◽  
Orawan Duangphakdee

Abstract Aphis craccivora Koch (Hemiptera: Aphididae) or cowpea aphid is a polyphagous insect pest that feeds on a variety of leguminous plants. We determined the contribution of host-associated genetic differentiation on population structure using the sequence data generated from analysis of mitochondrial cytochrome b oxidase (Cytb) and nuclear elongation factor-1 alpha (EF1-alpha) of A. craccivora collected from cultivated yardlong bean [Vigna unguiculata (L.) Walp. ssp. sesquipedalis (L.) H. Ohashi.] (Fabales: Fabaceae) and winged bean [Psophocarpus tetragonolobus (L.) D.C.] (Fabales: Fabaceae). Phylogenetic and haplotype network analyses revealed no evidence of strong host plant or geographical clustering in both the mitochondrial and nuclear gene dataset. A moderate, low-magnitude genetic distance (FST) between host plants and geographical localities was found in this study. An analysis of molecular variance (AMOVA) revealed that host plant and geography do not influence the structure of genetic variation in A. craccivora populations. Genetic variation between host plants at a location and host plants among locations demonstrated no consistent result for population subdivision of A. craccivora. These results suggest that geographical location and host plants do not significantly influence the genetic structure of A. craccivora, and this might be due to their high reproductive (parthenogenesis) ability and high migration (airborne) between host plants and regions of the country.


2007 ◽  
Vol 20 (1) ◽  
pp. 54 ◽  
Author(s):  
Siti R. Ariati ◽  
Daniel J. Murphy ◽  
Stuart Gardner ◽  
Pauline Y. Ladiges

Morphological variation in Acacia victoriae, a species widespread in arid and semi-arid regions of Australia, was analysed by phenetic methods of classification and ordination. Three morphological groups were identified on the basis of phyllode characters and are treated as subspecies. Populations with short, elliptic and tomentose phyllodes are confirmed as A. victoriae subsp. arida Pedley; this form occurs mainly in central Australia. Populations with linear to oblong, non-tomentose phyllodes are referred to subsp. victoriae; this subspecies is the most variable and widely distributed across Australia. Populations with very long, narrow phyllodes, distributed in northern Australia from the Kimberley to Queensland, are described as fasciaria subsp. nov. A small number of non-tomentose specimens with broad elliptic phyllodes from central Australia require further assessment. Thirteen accessions previously sequenced for internal spacer regions and external spacer regions of ribosomal nuclear DNA showed genetic divergence. Six accessions of subsp. fasciaria formed a clade in a parsimony analysis, confirming that the long phyllode form is genetically distinct.


PLoS ONE ◽  
2018 ◽  
Vol 13 (9) ◽  
pp. e0203537
Author(s):  
Xiuxia Mu ◽  
Chongliang Zhang ◽  
Chi Zhang ◽  
Binduo Xu ◽  
Ying Xue ◽  
...  

2019 ◽  
Vol 85 (2) ◽  
pp. 295-302 ◽  
Author(s):  
Tomoya Hori ◽  
Takuji Noda ◽  
Toshihiro Wada ◽  
Takashi Iwasaki ◽  
Nobuaki Arai ◽  
...  

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