Structural Systematics of 2/4-Nitrophenoxide Complexes of Closed-Shell Metal Ions. II 4-Nitrophenoxides of Group 1

1998 ◽  
Vol 51 (8) ◽  
pp. 723 ◽  
Author(s):  
Jack M. Harrowfield ◽  
Raj Pal Sharma ◽  
Brian W. Skelton ◽  
Allan H. White

Room-temperature single-crystal X-ray studies are recorded for 4-nitrophenoxide (4-np¯) salts, variously hydrated, of the Group 1 metals, M(4-np-).χH2O, for M = Li, Na (redetermination), K (already recorded), Rb and Cs. Li(4-np).3H2O is monoclinic, space group Pc, a 11·359(3), b 7·518(3), c 10·855(4) Å, β 90·56(3)°, Z = 4; conventional R on |F| was 0·056 for No 2098 independent `observed" (I > 3σ(I)) reflections. Na(4-np).2H2O is orthorhombic, Ima2, a 6·888(6), b 19·699(8), c 6·436(8) Å, Z = 4, R 0·031 for No 664. Rb(4-np).H2O is orthorhombic, Pbca, a 11·82(3), b 19·724(7), c 7·199(1) Å, Z = 8, R 0·036 for No 1465. Cs(4-np).3H2O is monoclinic, P 21/c, a 13·337(2), b 12·770(5), c 6·311(2) Å, β 100·56(3)°, Z = 4, R 0·031 for No 2636. Whereas the lithium compound is essentially a discrete mononuclear neutral molecular complex [(4-np-O)Li(OH2)3] with four-coordinate lithium, the other compounds exhibit two- or three-dimensional sheet polymer structures with 4-nitrophenoxide moieties providing O-C6H4-NO2 head-tail connecting motifs between successive metal atoms.

1998 ◽  
Vol 51 (8) ◽  
pp. 785 ◽  
Author(s):  
Jack M. Harrowfield ◽  
Raj Pal Sharma ◽  
Brian W. Skelton ◽  
Allan H. White

Room-temperature single-crystal X-ray structure determinations are recorded for a number of Group 2 4-nitrophenoxide acid salts, variously hydrated M(4-np)2.x(4-npH).yH2O. Ca(4-np)2.2(4-npH).8H2O is monoclinic, P 21/n, a 30·52(1), b 10·027(1), c 23·65(2) Å, β 116·3(5)°, Z = 8, conventional R on |F| being 0·058 for No 5092 independent ‘observed’ (I > 3s(I)) reflections. Sr(4-np)2.2(4-npH).8H2O, based on a subcell of the former, is monoclinic, P 21/c, a 15·576(5), b10·081(6), c 24·20(2) Å, β 117·99(5)° , Z = 4, R 0·054 for No 2908. Ba(4-np)2.2(4-npH).4H2O is orthorhombic, Fdd2, a 28·01(1), b 19·90(1), c 10·692(7)Å, Z = 8, R 0·028 for No 1967. The strontium array (and that of the calcium salt developed from it) may be represented as [(H2O)6Sr(4-npH.4-np)] (4-npH.4-np), a neutral ligand being unsymmetrically chelated to the strontium through the nitro group, with a quasi-parallel counter ion hydrogen-bonded to it by phenoxide confrontation. The other two 4-np residues make up a similar phenoxide-confronting pair (4-npH.4-np), the hydrogen being more intimately associated with one moiety. The barium salt is also an interesting array: the 10-coordinate barium lies on a crystallographic 2 axis, in an environment of two pairs of symmetry-related nitro-chelating ligand anions, and a pair of nitro-O coordinating neutral 4-npH ligands; the whole [(H2O)4Ba(4-np)2(4-npH)2] array may be envisaged as a single neutral (super)molecule. Hydrogen bonds between confronting phenoxides of the neutral 4-npH components of the parent and the 4-np- components of neighbouring molecules link the whole into a three-dimensional array.


1998 ◽  
Vol 51 (8) ◽  
pp. 707 ◽  
Author(s):  
Jack M. Harrowfield ◽  
Raj Pal Sharma ◽  
Todd M. Shand ◽  
Brian W. Skelton ◽  
Allan H. White

Room-temperature, single-crystal X-ray studies are recorded for the variously hydrated Group 1 metal derivatives of 2-nitrophenol (2-npH = C6H5NO3). A provisional determination is reported for Li(2-np).½H2O, set as monoclinic, P21/c, a 3·535(3), b 15·06(1), c 24·42(2) Å, β 91·7(1)°, Z = 8, conventional R on F currently 0·18 for No 875 ‘observed’ (I > 3σ(I)) reflections. Na(2-np).H2O is monoclinic, C2/c, a 34 ·23(2), b 3·624(4), c 35·48(2) Å, β 91·24(4)°, Z = 24, R 0·060 for No 1371. Rb(2-np).½ H2O is monoclinic, C2/c (isomorphous with the previously determined potassium analogue), a 25·269(9), b 5·381(5), c 12·010(3) Å, β 105·35(3)°, Z = 8, R 0·046 for No 1380. Cs(2-np).½H2O is monoclinic, P21/n, a 7·648(3), b 26·19(1), c 8·713(6) Å, β 111·75(2)°, Z = 8, R 0·061 for No 2347. All compounds except the lithium derivative are two-dimensional polymeric sheets in which the aromatic rings project to either side of a core of metal atoms coordinated by a web of 2-nitrophenoxide oxygen atoms in various bridging functionalities. The lithium compound is a novel ‘stair’ polymer with two crystallographically independent lithium atoms at successive independent Li–O crossbars, the oxygen atoms of which are phenoxide-Oof each of the two independent ligands. The lithium atoms are alternately four- and five-coordinate, the fourth coordination site of the first being occupied by the water molecule oxygen atom, while the fourth and fifth sites of the second are occupied by the cis-2-nitro oxygen atoms of the two ligands


1999 ◽  
Vol 52 (6) ◽  
pp. 459 ◽  
Author(s):  
Cameron J. Kepert ◽  
Lu Wei-Min ◽  
Peter C. Junk ◽  
Brian W. Skelton ◽  
Allan H. White

Room-temperature single-crystal X-ray structure determinations carried out on ‘maximally’ hydrated rare earth(III) trifluoroacetates, Ln(tfa)3.x H2O, crystallized at room temperature, show the Ln = La, Ce adducts to be isomorphous and monoclinic, P 21/c, a ≈ 11·9, b ≈ 12·8, c ≈ 9·8 8 Å, β ≈ 103·7°, Z = 4; they are trihydrates. The Ln = Pr, Lu (and, implicitly, intermediate Ln) adducts are also monoclinic, P 21/c, Z = 4, and trihydrates, but of a different polymorph, with a ≈ 9·2, b 18·8, c ≈ 9·8 Å, β ≈ 114°. For the four determinations, conventional R values on |F| were 0·038, 0·032, 0·036, and 0·034 for No 2952, 4821, 4544, and 4092 independent ‘observed’ (I > 3σ(I)) diffractometer reflections respectively. The Ln = La, Ce adducts are two-dimensional polymers, the sheets parallel to the bc plane; the other systems are binuclear, the two metal atoms being linked by four bridging carboxylate O-tfa-O′ ligands. In both structural types, the metal atoms are eight-coordinate, but differ in the number of water molecules (2 cf. 3) in the O8 array. Extension of previous studies by single-crystal X-ray methods on the structural characterization of trivalent rare earth trichloroacetates, ‘maximally’ hydrated at local ambience, Ln(tca)3.x H2O, suggests the following arrays to be prevalent. The Ln = La adduct is a pentahydrate, monoclinic, P21/c, a 5·636(7), b 22·454(4), c 16·58(1) Å, β 90·52(8)°, Z = 4 f.u., R 0·035 for No 4154. The compound is a linear polymer along a, successive nine-coordinate La (separated by a) being linked by three O-tca-O′ bridging ligands at the opposite faces of a tricapped trigonal prismatic array, the equatorial sites being filled by water molecules. The Ln = Ce adduct is a trihydrate, monoclinic, P 21/c, a 10·071(2), b 22·973(2), c 20·222(5) Å, b 119·48(2)°, Z= 8 f.u., R 0·050 for No 5019. The array is also linear polymeric, but with successive Ce being linked alternately now by sets of two and then four O-tca-O′ bridging carboxylates along b, the Ln = Ce coordination number being diminished (relative to La) to eight with the coordination of two water molecules to each metal. Ln = Pr, Lu (and, presumptively, intermediate Ln) are dihydrates, triclinic, P 1, a ≈ 11·70, b ≈ 12·8, c ≈ 15·3 Å, α ≈ 71, β ≈ 77·85, γ ≈ 65·5°, Z = 4 f.u., R 0·056, 0·059 for No 5650, 5398. The array is a linear polymer, similar to that of the Ln = Ce adduct but alongside the bridging acetate pair one of the water molecules now bridges, resulting in a stepped Ln 1 array (along c) rather than a quasi-straight one as is found for the Ln = Ce (and La) adduct. Structure determinations are also recorded for rare earth(III) trichloroacetate ethanol trisolvates, Ln(tca)3.3EtOH. Adducts of Ln = La, Yb (and, implicitly, intermediate Ln) are isomorphous, triclinic, P 1, a ≈ 12, b ≈ 11·8, c ≈ 11·4 Å, α ≈ 114, β ≈ 100, γ ≈ 104°, Z = 2 f.u., R 0·056, 0·050 for No 3843, 4171. The complexes are centrosymmetric dimers [(EtOH)3(tca-O)Ln(O-tca-O′)4Ln(O-tca)(HOEt)3], the two metal atoms being linked by four O-tca-O′ bridging carboxylate groups; the metal atoms are eight-coordinate, the other four sites being occupied by four oxygen atoms from unidentate ethanol and carboxylate moieties. Bis(bis(2-pyridyl)aminium) bis(diaquatetrakis(trichloroacetato)lanthanate(III)), 2(dpaH+) [(H2O)2-(tca-O)(tca-O,O′)2La(O-tca-O′)2La(O,O′-tca)2(O-tca)(OH2)2]2-, is triclinic, P 1, a, 13·901(2), b 13·764(3), c 10·073(2) Å, α 104·04(2), β 108·93(2), γ 101·50(2)°, Z = 1 binuclear f.u., R 0·045 for No 4999. The anion is binuclear, the two nine-coordinate lanthanum atoms being linked by a pair of bridging O-carboxylate-O′ groups. The other seven sites of the LaO9 array are occupied by a pair of O,O′ -chelating and one O-unidentate carboxylate groups and a pair of water molecules.


1998 ◽  
Vol 51 (8) ◽  
pp. 761 ◽  
Author(s):  
Jack M. Harrowfield ◽  
Raj Pal Sharma ◽  
Brian W. Skelton ◽  
Allan H. White

Room-temperature single-crystal X-ray studies are recorded for 2-nitrophenoxide salts of Group 2 metals, variously hydrated M(2-np)2.xH2O, M = Mg, Ca, Sr; the structure of the barium analogue has been previously recorded. Mg(2-np)2.2H2O is monoclinic, P21/a, a 7·377(1), b 7·518(1), c 12·877(3) Å, β 106·58(2)°, Z = 2; conventional R on |F| 0·13 for No 508 independent ‘observed’ (I > 3σ(I)) reflections. Ca(2-np)2.H2O is monoclinic, C2, a 25·92(1), b 7·176(3), c 3·660(4) Å, β 93·66(5)°, Z = 2, R 0·061 for No 541. M(2-np)2.4H2O, M = Ca, Sr, are isomorphous, monoclinic, C2/c, a ≈ 31·3, b ≈ 8·1, c ≈ 12·8 Å, β 103°, Z = 8; R was 0·056, 0·055 forNo 1988, 1744 respectively. The magnesium salt is a discrete molecular array disposed about a crystallographic inversion centre with chelating phenoxide ligands: trans-[Mg(2-np)2(OH2)2]. The calcium monohydrate salt is a novel one-dimensional polymer with a ... Ca(µ-O)2Ca(µ-O)2Ca ... spine, the ligand pairs chelating the calcium with phenoxide-O additionally bridging. The seven-coordinate calcium atoms lie on the crystallographic 2 axis with the water molecule, also on that axis, making up a seven-coordinate environment. The tetrahydrate is also a one-dimensional polymer with a similar spine, the bridging oxygen atoms derivative of water molecules. A chelating ligand and two further water molecules make up an eight-coordinate metal environment, with the free anions interleaving stacks of coordinated anions up c.


2020 ◽  
Vol 73 (6) ◽  
pp. 455
Author(s):  
Eric J. Chan ◽  
Jack M. Harrowfield ◽  
Brian W. Skelton ◽  
Alexandre N. Sobolev ◽  
Allan H. White

Single crystal X-ray structural characterisations are reported for adducts of the form [(L-O)Eu(O,O′-dpm)3] obtained by the crystallisation of tris(dipivaloylmethanato)europium(iii) (dpm=[HC(C(tBu).CO)2]−) from an array of dipolar aprotic oxygen-donor solvents L (L=N-methylpyrrolidinone (nmp), trimethylphosphate, (MeO)3PO, (tmp), hexamethylphosphoramide (hmpa), dimethylacetamide (dma), dimethyl sulfoxide (dmso), and the bidentate octamethylpyrophosphoramide (ompa). In all adducts, the resulting arrays contain seven-coordinate metal atoms, which adopt two different isomeric forms of the mono-capped trigonal prismatic stereochemistry, the L=dma and dmso adducts corresponding to one type, nmp and tmp the other. The adduct formed with ompa behaves as a pair of discrete metal environments bridged by the O-ompa-O′ ligand, thus; [(dpm-O,O′)3Eu(O-ompa-O′)Eu(O,O′-dpm)3], and is found in two forms, one in which both Eu environments is of the tmp type, the other of the dmso/dma type. In the hmpa adduct, the asymmetric unit of the structure is a disordered composite of both types. In none of the adducts is there any further solvation beyond coordination of a single L.


1999 ◽  
Vol 77 (3) ◽  
pp. 313-318 ◽  
Author(s):  
George KH Shimizu ◽  
Gary D Enright ◽  
Gabriela S Rego ◽  
John A Ripmeester

Single crystal X-ray structure determinations of two solvated silver sulfonates have been obtained and these compounds have been shown to adopt infinite one-dimensional motifs. {AgOTs(MeCN)}[Formula: see text] (OTs = p-toluenesulfonate) crystallizes in the monoclinic space group, P21, a = 8.4278(5) Å, b = 5.7413(3) Å, c = 12.1057(7) Å, β = 109.24(1)°. {Ag(NDSA)(MeCN)2(H3O)(H2O)2}[Formula: see text] (NDSA = 1,5-naphthalenedisulfonate) crystallizes in the triclinic space group, P[Formula: see text], a = 8.3407(4) Å, b = 10.4374(5) Å, c = 12.3399(6) Å, α = 101.941(8)°, β = 109.24(1)°, γ = 102.190(8)°. Despite one compound containing a monosulfonate and the other a disulfonate, both complexes form infinite one-dimensional arrays.Key words: silver, sulfonates, coordination polymer.


2004 ◽  
Vol 59 (8) ◽  
pp. 943-946 ◽  
Author(s):  
Viktor Hlukhyy ◽  
Rainer Pöttgen

AbstractThe hexagonal Laves phase MgIr2 was synthesized from the elements in a sealed tantalum tube in an induction furnace. MgIr2 was investigated by powder and single crystal X-ray data: P63/mmc, a = 516.9(1), c = 838.5(2) pm, wR2 = 0.0771, 135 F2 values, and 11 variable parameters. The magnesium atoms have coordination number (CN) 16 (12 Ir + 4 Mg), while the smaller iridium atoms, Ir1 and Ir2, both have CN 12 (6 Ir + 6 Mg). The Ir-Ir distances within the three-dimensional network of face- and corner-sharing Ir4/2 tetrahedra range from 250 to 267 pm. The magnesium atoms have one shorter (306 pm) and three longer (319 pm) magnesium contacts. The crystal chemistry of MgIr2 is briefly discussed and compared with the other binary Mg-Ir intermetallics.


2020 ◽  
Vol 76 (1) ◽  
pp. 10-16
Author(s):  
Saier Wang ◽  
Rong Bi ◽  
Jiadi Liu ◽  
Ying Shi ◽  
Kuaibing Wang ◽  
...  

With the rapid development of metal–organic frameworks (MOFs), a variety of MOFs and their derivatives have been synthesized and reported in recent years. Commonly, multifunctional aromatic polycarboxylic acids and nitrogen-containing ligands are employed to construct MOFs with fascinating structures. 4,4′,4′′-(1,3,5-Triazine-2,4,6-triyl)tribenzoic acid (H3TATB) and the bidentate nitrogen-containing ligand 1,3-bis[(imidazol-1-yl)methyl]benzene (bib) were selected to prepare a novel ZnII-MOF under solvothermal conditions, namely poly[[tris{μ-1,3-bis[(imidazol-1-yl)methyl]benzene}bis[μ3-4,4′,4′′-(1,3,5-triazine-2,4,6-triyl)tribenzoato]trizinc(II)] dimethylformamide disolvate trihydrate], {[Zn3(C24H12N3O6)2(C14H14N4)3]·2C3H7NO·3H2O} n (1). The structure of 1 was characterized by single-crystal X-ray diffraction, IR spectroscopy and powder X-ray diffraction. The properties of 1 were investigated by thermogravimetric and fluorescence analysis. Single-crystal X-ray diffraction shows that 1 belongs to the monoclinic space group Pc. The asymmetric unit contains three crystallographically independent ZnII centres, two 4,4′,4′′-(1,3,5-triazine-2,4,6-triyl)tribenzoate (TATB3−) anions, three complete bib ligands, one and a half free dimethylformamide molecules and three guest water molecules. Each ZnII centre is four-coordinated and displays a distorted tetrahedral coordination geometry. The ZnII centres are connected by TATB3− anions to form an angled ladder chain with large windows. Simultaneously, the bib ligands link ZnII centres to give a helical Zn–bib–Zn chain. Furthermore, adjacent ladders are bridged by Zn–bib–Zn chains to form a fascinating three-dimensional self-penetrated framework with the short Schläfli symbol 65·7·813·9·10. In addition, the luminescence properties of 1 in the solid state and the fluorescence sensing of metal ions in suspension were studied. Significantly, compound 1 shows potential application as a fluorescent sensor with sensing properties for Zr4+ and Cu2+ ions.


IUCrJ ◽  
2014 ◽  
Vol 1 (4) ◽  
pp. 204-212 ◽  
Author(s):  
Francesco Stellato ◽  
Dominik Oberthür ◽  
Mengning Liang ◽  
Richard Bean ◽  
Cornelius Gati ◽  
...  

A new approach for collecting data from many hundreds of thousands of microcrystals using X-ray pulses from a free-electron laser has recently been developed. Referred to as serial crystallography, diffraction patterns are recorded at a constant rate as a suspension of protein crystals flows across the path of an X-ray beam. Events that by chance contain single-crystal diffraction patterns are retained, then indexed and merged to form a three-dimensional set of reflection intensities for structure determination. This approach relies upon several innovations: an intense X-ray beam; a fast detector system; a means to rapidly flow a suspension of crystals across the X-ray beam; and the computational infrastructure to process the large volume of data. Originally conceived for radiation-damage-free measurements with ultrafast X-ray pulses, the same methods can be employed with synchrotron radiation. As in powder diffraction, the averaging of thousands of observations per Bragg peak may improve the ratio of signal to noise of low-dose exposures. Here, it is shown that this paradigm can be implemented for room-temperature data collection using synchrotron radiation and exposure times of less than 3 ms. Using lysozyme microcrystals as a model system, over 40 000 single-crystal diffraction patterns were obtained and merged to produce a structural model that could be refined to 2.1 Å resolution. The resulting electron density is in excellent agreement with that obtained using standard X-ray data collection techniques. With further improvements the method is well suited for even shorter exposures at future and upgraded synchrotron radiation facilities that may deliver beams with 1000 times higher brightness than they currently produce.


1979 ◽  
Vol 32 (12) ◽  
pp. 2757 ◽  
Author(s):  
CL Raston ◽  
B Walter ◽  
AH White

The title compound, [C5H6N]+ [Cu2(SCN)3]-, has been prepared and its crystal structure determined by single-crystal X-ray diffraction at 295(1) K. Crystals are monoclinic, Cc, a 11.238(7), b 11.644(4), c 10.020(4)Ǻ, β 102.67(3)°, Z 4, the structure being refined to a residual of 0.037 for the 960 'observed' reflections. The structure comprises a three-dimensional network of copper(I) atoms linked by bridging thiocyanate groups, the pyridinium counterions occupying sites in the network cavities. Both copper atoms are four-coordinate, one having an environment of one nitrogen atom [Cu-N, 1.926(9)Ǻ] and three sulfur atoms [Cu-S, 2.319(3), 2.421(3), 2.448(3)Ǻ], while the other is coordinated by two atoms of each type [Cu-N, 1.935(9), 1.947(10); Cu-S, 2.430(3), 2.493(4) Ǻ].


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