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Homology modeling, docking and molecular dynamics studies of some secondary metabolites of actinomycetes as biocontrol agents against the 3HNR enzyme of the phytopathogenic fungus Alternaria alternata
Journal of Biomolecular Structure and Dynamics
◽
10.1080/07391102.2021.2014970
◽
2021
◽
pp. 1-13
Author(s):
Nedjwa Mansouri
◽
Ouided Benslama
◽
Rabah Arhab
Keyword(s):
Molecular Dynamics
◽
Secondary Metabolites
◽
Homology Modeling
◽
Alternaria Alternata
◽
Biocontrol Agents
◽
Phytopathogenic Fungus
Download Full-text
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Integrated Computational Tools for Identification of CCR5 Antagonists as Potential HIV-1 Entry Inhibitors: Homology Modeling, Virtual Screening, Molecular Dynamics Simulations and 3D QSAR Analysis
Molecules
◽
10.3390/molecules19045243
◽
2014
◽
Vol 19
(4)
◽
pp. 5243-5265
◽
Cited By ~ 7
Author(s):
Suri Moonsamy
◽
Radha Dash
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Mahmoud Soliman
Keyword(s):
Molecular Dynamics
◽
Virtual Screening
◽
Homology Modeling
◽
3D Qsar
◽
Computational Tools
◽
Qsar Analysis
◽
Entry Inhibitors
◽
Ccr5 Antagonists
◽
Dynamics Simulations
◽
Hiv 1
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Efficient integrative transformation of the phytopathogenic fungus Alternaria alternata mediated by the repetitive rDNA sequences
Gene
◽
10.1016/0378-1119(90)90181-p
◽
1990
◽
Vol 90
(2)
◽
pp. 207-214
◽
Cited By ~ 24
Author(s):
Takashi Tsuge
◽
Syoyo Nishimura
◽
Hirokazu Kobayashi
Keyword(s):
Alternaria Alternata
◽
Phytopathogenic Fungus
◽
Rdna Sequences
◽
Integrative Transformation
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Homology modeling and molecular dynamics simulation of N-myristoyltransferase from Plasmodium falciparum: an insight into novel antimalarial drug design
Journal of Molecular Modeling
◽
10.1007/s00894-015-2586-4
◽
2015
◽
Vol 21
(3)
◽
Cited By ~ 5
Author(s):
Paulomi Paul
◽
Abhishek Chowdhury
◽
Anupam Das Talukdar
◽
Manabendra Dutta Choudhury
Keyword(s):
Molecular Dynamics
◽
Plasmodium Falciparum
◽
Molecular Dynamics Simulation
◽
Drug Design
◽
Homology Modeling
◽
Antimalarial Drug
◽
Dynamics Simulation
◽
Insight Into
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Biocontrol Agents and Secondary Metabolites
10.1016/c2019-0-03577-7
◽
2021
◽
Keyword(s):
Secondary Metabolites
◽
Biocontrol Agents
Download Full-text
A computational study on cannabinoid receptors and potent bioactive cannabinoid ligands: homology modeling, docking, de novo drug design and molecular dynamics analysis
Molecular Diversity
◽
10.1007/s11030-009-9166-4
◽
2009
◽
Vol 14
(2)
◽
pp. 257-276
◽
Cited By ~ 26
Author(s):
Serdar Durdagi
◽
Manthos G. Papadopoulos
◽
Panagiotis G. Zoumpoulakis
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Catherine Koukoulitsa
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Thomas Mavromoustakos
Keyword(s):
Molecular Dynamics
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Drug Design
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Homology Modeling
◽
Cannabinoid Receptors
◽
De Novo
◽
Computational Study
◽
Dynamics Analysis
◽
De Novo Drug Design
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Toward Selective Histone Deacetylase Inhibitor Design: Homology Modeling, Docking Studies, and Molecular Dynamics Simulations of Human Class I Histone Deacetylases
Journal of Medicinal Chemistry
◽
10.1021/jm0505011
◽
2005
◽
Vol 48
(22)
◽
pp. 6936-6947
◽
Cited By ~ 146
Author(s):
Di-Fei Wang
◽
Paul Helquist
◽
Norbert L. Wiech
◽
Olaf Wiest
Keyword(s):
Molecular Dynamics
◽
Homology Modeling
◽
Molecular Dynamics Simulations
◽
Histone Deacetylase
◽
Histone Deacetylase Inhibitor
◽
Histone Deacetylases
◽
Docking Studies
◽
Human Class
◽
Deacetylase Inhibitor
◽
Dynamics Simulations
Download Full-text
Combining fragment homology modeling with molecular dynamics aims at prediction of Ca2+ binding sites in CaBPs
Journal of Computer-Aided Molecular Design
◽
10.1007/s10822-013-9668-0
◽
2013
◽
Vol 27
(8)
◽
pp. 697-705
◽
Cited By ~ 5
Author(s):
ChunLi Pang
◽
TianGuang Cao
◽
JunWei Li
◽
MengWen Jia
◽
SuHua Zhang
◽
...
Keyword(s):
Molecular Dynamics
◽
Homology Modeling
◽
Binding Sites
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Analysis of Antagonistic Potential of Secondary Metabolites and Organic Fractions of Trichoderma Species against Alternaria Alternata
Biocontrol Science
◽
10.4265/bio.24.81
◽
2019
◽
Vol 24
(2)
◽
pp. 81-88
◽
Cited By ~ 1
Author(s):
SHAZIA SHAFIQUE
◽
SOBIYA SHAFIQUE
◽
ALINA JAVED
◽
NAUREEN AKHTAR
◽
SHUMAILA BIBI
Keyword(s):
Secondary Metabolites
◽
Alternaria Alternata
◽
Trichoderma Species
◽
Antagonistic Potential
◽
Organic Fractions
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Treatment of Liver Disease using Secondary Metabolites of Azadirachta indica by Molecular Docking and Molecular Dynamics Simulations
10.22541/au.160369567.77185532/v1
◽
2020
◽
Author(s):
Divya Singh
◽
Noopur Khare
Keyword(s):
Molecular Dynamics
◽
Molecular Docking
◽
Liver Disease
◽
Secondary Metabolites
◽
Molecular Dynamics Simulations
◽
Azadirachta Indica
◽
Dynamics Simulations
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Homology modeling, docking, and molecular dynamics simulation of the receptor GALR2 and its interactions with galanin and a positive allosteric modulator
Journal of Molecular Modeling
◽
10.1007/s00894-016-2944-x
◽
2016
◽
Vol 22
(4)
◽
Cited By ~ 6
Author(s):
Wen-Qi Hui
◽
Qi Cheng
◽
Tian-Yu Liu
◽
Qin Ouyang
Keyword(s):
Molecular Dynamics
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Molecular Dynamics Simulation
◽
Homology Modeling
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Dynamics Simulation
◽
Allosteric Modulator
◽
Positive Allosteric Modulator
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