When the autophagy protein ATG16L1 met the ciliary protein IFT20

Autophagy ◽  
2021 ◽  
pp. 1-3
Author(s):  
Asma Boukhalfa ◽  
Federica Roccio ◽  
Nicolas Dupont ◽  
Patrice Codogno ◽  
Etienne Morel
Keyword(s):  
PLoS ONE ◽  
2013 ◽  
Vol 8 (12) ◽  
pp. e83062 ◽  
Author(s):  
Maoqing Wu ◽  
Chaozhe Yang ◽  
Binli Tao ◽  
Su Bu ◽  
Lisa M. Guay-Woodford

2021 ◽  
Vol 8 ◽  
Author(s):  
Zhigang Wang ◽  
Wenzhang Liang ◽  
Cuiqing Ma ◽  
Jiachao Wang ◽  
Xue Gao ◽  
...  

Chronic obstructive pulmonary disease (COPD) is a chronic respiratory disease with high morbidity and mortality worldwide. So far, smoking is still its leading cause. The characteristics of COPD are emphysema and airway remodeling, as well as chronic inflammation, which were predominated by macrophages. Some studies have reported that macrophages were involved in emphysema and chronic inflammation, but whether there is a link between airway remodeling and macrophages remains unclear. In this study, we found that both acute and chronic cigarette smoke exposure led to an increase of macrophages in the lung and a decrease of ciliated cells in the airway epithelium of a mouse model. The results of in vitro experiments showed that the ciliary protein (β-tubulin-IV) levels of BEAS-2B cells could be inhibited when co-cultured with human macrophage line THP-1, and the inhibitory effect was augmented with the stimulation of cigarette smoke extract (CSE). Based on the results of transcriptome sequencing, we focused on the protein, bone morphogenetic protein-2 (BMP-2), secreted by the macrophage, which might mediate this inhibitory effect. Further studies confirmed that BMP-2 protein inhibited β-tubulin-IV protein levels of BEAS-2B cells under the stimulation of CSE. Coincidentally, this inhibitory effect could be nearly blocked by the BMP receptor inhibitor, LDN, or could be interfered with BMP-2 siRNA. This study suggests that activation and infiltration of macrophages in the lung induced by smoke exposure lead to a high expression of BMP-2, which in turn inhibits the ciliary protein levels of the bronchial epithelial cells, contributing to the remodeling of airway epithelium, and aggravates the development of COPD.


Cytoskeleton ◽  
2017 ◽  
Vol 74 (10) ◽  
pp. 390-402 ◽  
Author(s):  
Brian P. Piasecki ◽  
Thomas A. Sasani ◽  
Alexander T. Lessenger ◽  
Nicholas Huth ◽  
Shane Farrell

2020 ◽  
Vol 28 ◽  
pp. S75
Author(s):  
C.R. Coveney ◽  
J. Miotla-Zabrebska ◽  
V. Batchelor ◽  
B. Stott ◽  
I. Parisi ◽  
...  

2019 ◽  
Vol 09 (02) ◽  
pp. 101-103 ◽  
Author(s):  
Yeliz Cagan Appak ◽  
Masallah Baran ◽  
Burcu Ozturk Hismi ◽  
Berk Ozyilmaz ◽  
Kader Vardi ◽  
...  

AbstractRenal–hepatic–pancreatic dysplasia-1 (RHPD1) is an ultra-rare genetic disorder with a high mortality. It is caused by biallelic pathogenic variants in NPHP3, which encode nephrocytin, an important component of the ciliary protein complex. The NPHP3-related disease phenotype is diverse with RHPD1, nephronophthisis-3, and Meckel syndrome-7. In this case report, we present a female infant with hepatomegaly, cholestasis, and elevated transaminases who was found to carry a homozygous c.2975C > T variant of NPHP3. This is the first description of this genotype and RHPD1 phenotype in the literature. The patient is currently being closely monitored for the necessity of combined renal and liver transplantation under supportive treatment.


2018 ◽  
Vol 20 (suppl_6) ◽  
pp. vi75-vi75
Author(s):  
Jack Shireman ◽  
Fatemeh Atashi ◽  
Cheol Park ◽  
Louisa Warnke ◽  
Jason Miska ◽  
...  

2017 ◽  
Vol 28 (7) ◽  
pp. 898-906 ◽  
Author(s):  
Yohei Katoh ◽  
Saki Michisaka ◽  
Shohei Nozaki ◽  
Teruki Funabashi ◽  
Tomoaki Hirano ◽  
...  

The CRISPR/Cas9 system has revolutionized genome editing in virtually all organisms. Although the CRISPR/Cas9 system enables the targeted cleavage of genomic DNA, its use for gene knock-in remains challenging because levels of homologous recombination activity vary among various cells. In contrast, the efficiency of homology-independent DNA repair is relatively high in most cell types. Therefore the use of a homology-independent repair mechanism is a possible alternative for efficient genome editing. Here we constructed a donor knock-in vector optimized for the CRISPR/Cas9 system and developed a practical system that enables efficient disruption of target genes by exploiting homology-independent repair. Using this practical knock-in system, we successfully disrupted genes encoding proteins involved in ciliary protein trafficking, including IFT88 and IFT20, in hTERT-RPE1 cells, which have low homologous recombination activity. The most critical concern using the CRISPR/Cas9 system is off-target cleavage. To reduce the off-target cleavage frequency and increase the versatility of our knock-in system, we constructed a universal donor vector and an expression vector containing Cas9 with enhanced specificity and tandem sgRNA expression cassettes. We demonstrated that the second version of our system has improved usability.


2011 ◽  
Vol 22 (23) ◽  
pp. 4539-4548 ◽  
Author(s):  
Shuling Fan ◽  
Eileen L. Whiteman ◽  
Toby W. Hurd ◽  
Jeremy C. McIntyre ◽  
John F. Dishinger ◽  
...  

The small GTPase Ran and the importin proteins regulate nucleocytoplasmic transport. New evidence suggests that Ran GTP and the importins are also involved in conveying proteins into cilia. In this study, we find that Ran GTP accumulation at the basal bodies is coordinated with the initiation of ciliogenesis. The Ran-binding protein 1 (RanBP1), which indirectly accelerates Ran GTP → Ran GDP hydrolysis and promotes the dissociation of the Ran/importin complex, also localizes to basal bodies and cilia. To confirm the crucial link between Ran GTP and ciliogenesis, we manipulated the levels of RanBP1 and determined the effects on Ran GTP and primary cilia formation. We discovered that RanBP1 knockdown results in an increased concentration of Ran GTP at basal bodies, leading to ciliogenesis. In contrast, overexpression of RanBP1 antagonizes primary cilia formation. Furthermore, we demonstrate that RanBP1 knockdown disrupts the proper localization of KIF17, a kinesin-2 motor, at the distal tips of primary cilia in Madin–Darby canine kidney cells. Our studies illuminate a new function for Ran GTP in stimulating cilia formation and reinforce the notion that Ran GTP and the importins play key roles in ciliogenesis and ciliary protein transport.


2021 ◽  
Vol 29 ◽  
pp. S107
Author(s):  
C.R Coveney ◽  
J. Miotla-Zarebska ◽  
H.J. Samvelyan ◽  
J. Carnegie ◽  
E. Chang ◽  
...  

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