Identification of individual tree crowns from LiDAR data using a circle fitting algorithm with local maxima and minima filtering

2013 ◽  
Vol 4 (1) ◽  
pp. 29-37 ◽  
Author(s):  
Anjin Chang ◽  
Yangdam Eo ◽  
Yongmin Kim ◽  
Yongil Kim
Author(s):  
F. Naveed ◽  
B. Hu

The inability to detect the Emerald Ash Borer (EAB) at an early stage has led to the enumerable loss of different species of ash trees. Due to the increasing risk being posed by the EAB, a robust and accurate method is needed for identifying Individual Tree Crowns (ITCs) that are at a risk of being infected or are already diseased. This paper attempts to outline an ITC delineation method that employs airborne multi-spectral Light Detection and Ranging (LiDAR) to accurately delineate tree crowns. The raw LiDAR data were initially pre-processed to generate the Digital Surface Models (DSM) and Digital Elevation Models (DEM) using an iterative progressive TIN (Triangulated Irregular Network) densification method. The DSM and DEM were consequently used for Canopy Height Model (CHM) generation, from which the structural information pertaining to the size and shape of the tree crowns was obtained. The structural information along with the spectral information was used to segment ITCs using a region growing algorithm. The availability of the multi-spectral LiDAR data allows for delineation of crowns that have otherwise homogenous structural characteristics and hence cannot be isolated from the CHM alone. This study exploits the spectral data to derive initial approximations of individual tree tops and consequently grow those regions based on the spectral constraints of the individual trees.


Author(s):  
Yogendra K. Karna ◽  
Trent D. Penman ◽  
Cristina Aponte ◽  
Lauren T. Bennett

Fire-tolerant eucalypt forests of south eastern Australia are assumed to fully recover from even the most intense fires but surprisingly very few studies have quantitatively assessed that recovery. Accurate assessment of horizontal and vertical attributes of tree crowns after fire is essential to understand the fire’s legacy effects on tree growth and on forest structure. In this study, we quantitatively assessed individual tree crowns 8.5 years after a 2009 wildfire that burnt extensive areas of eucalypt forest in temperate Australia. We used airborne lidar data validated with field measurements to estimate multiple metrics that quantified the cover, density, and vertical distribution of individual-tree crowns in 51 plots of 0.05 ha in fire-tolerant eucalypt forest across four wildfire severity types (unburnt, low, moderate, high). Significant differences in the field-assessed mean height of fire scarring as a proportion of tree height, and in the proportions of trees with epicormic (stem) resprouts were consistent with the gradation in fire severity. Linear mixed-effects models indicated persistent effects of both moderate- and high-severity wildfire on tree crown architecture. Trees at high-severity sites had significantly less crown projection area and live crown width as a proportion of total crown width than those at unburnt and low-severity sites. Significant differences in lidar-based metrics (crown cover, evenness, leaf area density profiles) indicated that tree crowns at moderate- and high-severity sites were comparatively narrow and more evenly distributed down the tree stem. These conical-shaped crowns contrasted sharply with the rounded crowns of trees at unburnt and low-severity sites, and likely influenced both tree productivity and the accuracy of biomass allometric equations for nearly a decade after the fire. Our data provide a clear example of the utility of airborne lidar data for quantifying the impacts of disturbances at the scale of individual trees. Quantified effects of contrasting fire severities on the structure of resprouter tree crowns provide a strong basis for interpreting post-fire patterns in forest canopies and vegetation profiles in lidar and other remotely-sensed data at larger scales.


2006 ◽  
Vol 72 (4) ◽  
pp. 357-363 ◽  
Author(s):  
Barbara Koch ◽  
Ursula Heyder ◽  
Holger Weinacker

Sensors ◽  
2019 ◽  
Vol 19 (24) ◽  
pp. 5421 ◽  
Author(s):  
Faizaan Naveed ◽  
Baoxin Hu ◽  
Jianguo Wang ◽  
G. Brent Hall

In this study, multispectral Light Detection and Ranging (LiDAR) data were utilized to improve delineation of individual tree crowns (ITC) as an important step in individual tree analysis. A framework to integrate spectral and height information for ITC delineation was proposed, and the multi-scale algorithm for treetop detection developed in one of our previous studies was improved. In addition, an advanced region-based segmentation method that used detected treetops as seeds was proposed for segmentation of individual crowns based on their spectral, contextual, and height information. The proposed methods were validated with data acquired using Teledyne Optech’s Titan LiDAR sensor. The sensor was operated at three wavelengths (1550 nm, 1064 nm, and 532 nm) within a study area located in the city of Toronto, ON, Canada. The proposed method achieved 80% accuracy, compared with manual delineation of crowns, considering both matched and partially matched crowns, which was 12% higher than that obtained by the earlier marker-controlled watershed (MCW) segmentation technique. Furthermore, the results showed that the integration of spectral and height information improved ITC delineation using either the proposed framework or MCW segmentation, compared with using either spectral or height information individually.


2019 ◽  
Vol 11 (20) ◽  
pp. 2433 ◽  
Author(s):  
Yogendra K. Karna ◽  
Trent D. Penman ◽  
Cristina Aponte ◽  
Lauren T. Bennett

The fire-tolerant eucalypt forests of south eastern Australia are assumed to fully recover from even the most intense fires; however, surprisingly, very few studies have quantitatively assessed that recovery. The accurate assessment of horizontal and vertical attributes of tree crowns after fire is essential to understand the fire’s legacy effects on tree growth and on forest structure. In this study, we quantitatively assessed individual tree crowns 8.5 years after a 2009 wildfire that burnt extensive areas of eucalypt forest in temperate Australia. We used airborne LiDAR data validated with field measurements to estimate multiple metrics that quantified the cover, density, and vertical distribution of individual-tree crowns in 51 plots of 0.05 ha in fire-tolerant eucalypt forest across four wildfire severity types (unburnt, low, moderate, high). Significant differences in the field-assessed mean height of fire scarring as a proportion of tree height and in the proportions of trees with epicormic (stem) resprouts were consistent with the gradation in fire severity. Linear mixed-effects models indicated persistent effects of both moderate and high-severity wildfire on tree crown architecture. Trees at high-severity sites had significantly less crown projection area and live crown width as a proportion of total crown width than those at unburnt and low-severity sites. Significant differences in LiDAR -based metrics (crown cover, evenness, leaf area density profiles) indicated that tree crowns at moderate and high-severity sites were comparatively narrow and more evenly distributed down the tree stem. These conical-shaped crowns contrasted sharply with the rounded crowns of trees at unburnt and low-severity sites and likely influenced both tree productivity and the accuracy of biomass allometric equations for nearly a decade after the fire. Our data provide a clear example of the utility of airborne LiDAR data for quantifying the impacts of disturbances at the scale of individual trees. Quantified effects of contrasting fire severities on the structure of resprouter tree crowns provide a strong basis for interpreting post-fire patterns in forest canopies and vegetation profiles in Light Detection and Ranging (LiDAR) and other remotely-sensed data at larger scales.


Forests ◽  
2018 ◽  
Vol 9 (12) ◽  
pp. 759 ◽  
Author(s):  
Wan Wan Mohd Jaafar ◽  
Iain Woodhouse ◽  
Carlos Silva ◽  
Hamdan Omar ◽  
Khairul Abdul Maulud ◽  
...  

Individual tree crown (ITC) segmentation is an approach to isolate individual tree from the background vegetation and delineate precisely the crown boundaries for forest management and inventory purposes. ITC detection and delineation have been commonly generated from canopy height model (CHM) derived from light detection and ranging (LiDAR) data. Existing ITC segmentation methods, however, are limited in their efficiency for characterizing closed canopies, especially in tropical forests, due to the overlapping structure and irregular shape of tree crowns. Furthermore, the potential of 3-dimensional (3D) LiDAR data is not fully realized by existing CHM-based methods. Thus, the aim of this study was to develop an efficient framework for ITC segmentation in tropical forests using LiDAR-derived CHM and 3D point cloud data in order to accurately estimate tree attributes such as the tree height, mean crown width and aboveground biomass (AGB). The proposed framework entails five major steps: (1) automatically identifying dominant tree crowns by implementing semi-variogram statistics and morphological analysis; (2) generating initial tree segments using a watershed algorithm based on mathematical morphology; (3) identifying “problematic” segments based on predetermined set of rules; (4) tuning the problematic segments using a modified distance-based algorithm (DBA); and (5) segmenting and counting the number of individual trees based on the 3D LiDAR point clouds within each of the identified segment. This approach was developed in a way such that the 3D LiDAR points were only examined on problematic segments identified for further evaluations. 209 reference trees with diameter at breast height (DBH) ≥ 10 cm were selected in the field in two study areas in order to validate ITC detection and delineation results of the proposed framework. We computed tree crown metrics (e.g., maximum crown height and mean crown width) to estimate aboveground biomass (AGB) at tree level using previously published allometric equations. Accuracy assessment was performed to calculate percentage of correctly detected trees, omission and commission errors. Our method correctly identified individual tree crowns with detection accuracy exceeding 80 percent at both forest sites. Also, our results showed high agreement (R2 > 0.64) in terms of AGB estimates using 3D LiDAR metrics and variables measured in the field, for both sites. The findings from our study demonstrate the efficacy of the proposed framework in delineating tree crowns, even in high canopy density areas such as tropical rainforests, where, usually the traditional algorithms are limited in their performances. Moreover, the high tree delineation accuracy in the two study areas emphasizes the potential robustness and transferability of our approach to other densely forested areas across the globe.


2013 ◽  
Vol 58 (3-4) ◽  
pp. 524-535 ◽  
Author(s):  
Jiping Liu ◽  
Jing Shen ◽  
Rong Zhao ◽  
Shenghua Xu

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