Stump removal and tree species composition promote a bacterial microbiome that may be beneficial in the suppression of root disease

2020 ◽  
Vol 97 (1) ◽  
Author(s):  
Dixi Modi ◽  
Suzanne Simard ◽  
Les Lavkulich ◽  
Richard C Hamelin ◽  
Sue J Grayston
Keyword(s):  
Species Composition ◽  
Tree Species ◽  
Bacterial Communities ◽  
Mineral Soil ◽  
Root Disease ◽  
Rrna Gene ◽  
Plant Growth Promoting Bacteria ◽  
Tree Species Composition ◽  
Α Diversity ◽  
Bacterial Microbiome

ABSTRACT Stumping is an effective forest management practice for reducing the incidence of Armillaria root-rot in regenerating trees, but its impact on the soil bacterial community has not been ascertained. This study investigated the long-term impact of stumping and tree species composition in a 48-year-old trial at Skimikin, British Columbia, on the relative abundance, diversity and taxonomic composition of bacterial communities by sequencing the v4 region of 16S rRNA gene using the Illumina Miseq platform. A total of 108 samples were collected from the forest floor (fermented (F) and humus (H) layers) and mineral soil (A (0–10 cm) and B (10–20 cm) horizons) of 36 plots (half each stumped or unstumped) that were planted with pure stands and admixtures of Douglas-fir, western redcedar and paper birch. Bacterial α-diversity in the B horizon declined with stumping whereas β-diversity was affected both by tree species and stumping treatments, with fir and birch supporting distinct bacterial communities. All horizons of stumped plots of birch and its admixtures were significantly enriched with potential plant growth-promoting bacteria. In conclusion, stumping along with planting birch alone or in admixture with other species promotes a bacterial microbiome that appears beneficial in the suppression of root disease.

Long-term effects of stump removal and tree species composition on the diversity and structure of soil fungal communities

2020 ◽  
Vol 96 (5) ◽  
Author(s):  
Dixi Modi ◽  
Suzanne Simard ◽  
Jean Bérubé ◽  
Les Lavkulich ◽  
Richard Hamelin ◽  
...  
Keyword(s):  
Species Composition ◽  
Fungal Community ◽  
Tree Species ◽  
Management Practice ◽  
Tree Regeneration ◽  
Root Disease ◽  
Fungal Communities ◽  
Tree Species Composition ◽  
The Impact

ABSTRACT Stump removal is a common forest management practice used to reduce the mortality of trees affected by the fungal pathogen-mediated root disease, Armillaria root rot, but the impact of stumping on soil fungal community structure is not well understood. This study analyzed the long-term impact of stumping and tree species composition on the abundance, diversity and taxonomic composition of soil fungal communities using internal transcribed spacer (ITS) marker-based DNA metabarcoding in a 48-year-old trial at Skimikin, British Columbia. A total of 108 samples were collected from FH (fermented and humus layers), and soil mineral horizons (A and B) from stumped and unstumped plots of six tree species treatments (pure stands and admixtures of Douglas-fir, western red-cedar and paper birch). Fungal α-diversity in the A horizon significantly increased with stumping regardless of tree species composition, while β-diversity was significantly affected by stumping in all the horizons. We also observed that the relative abundance of the saprotrophic fungal community declined while that of the ectomycorrhizal fungal community increased with stumping. In conclusion, increase in ectomycorrhizal fungal associations, which are positively associated with tree productivity, suggests that stumping can be considered a good management practice for mitigating root disease and promoting tree regeneration.

scholarly journals Silicon cycled by tropical forest trees: effects of species, elevation and bedrock on Mount Kinabalu, Malaysia

2018 ◽  
Author(s):  
Ryosuke Nakamura ◽  
Hidehiro Ishizawa ◽  
Rota Wagai ◽  
Shizuo Suzuki ◽  
Kanehiro Kitayama ◽  
...  
Keyword(s):  
Species Composition ◽  
Leaf Litter ◽  
Tropical Forests ◽  
Tree Species ◽  
Mineral Soil ◽  
Basal Area ◽  
Forest Monitoring ◽  
Tree Species Composition ◽  
Lower Elevation ◽  
Significant Difference

Abstract. Plant species differ in degrees of silicon (Si) uptake and accumulation, and may differentially influence biogeochemical cycles of Si, possibly in interaction with other environmental factors. Here, we report how patterns of Si cycling by vegetation differ with species composition, elevation and bedrock types for species-rich tropical forests on Mt. Kinabalu, Borneo. We used eight forest monitoring plots established in 1995 at four altitudes (700, 1700, 2700 and 3100 m above sea level) on two geological substrates (Si-rich acidic sedimentary and less Si-rich ultrabasic igneous rock), where tree species composition, abundance, biomass and litterfall had been monitored. For live leaves of 71 dominant tree species (total relative basal area > 60 % in each plot) and leaf litter collected in traps, Si concentration was determined after alkaline extraction. Si availability in the upper 10 cm of mineral soil was determined as Si dissolved to water after shaking overnight. Tree species with high leaf Si concentrations occurred mostly in the lowest elevation plots. The community-mean Si concentration in live leaves, as well as Si concentration in leaf litter, decreased with increasing elevation. The estimated annual flux of leaf litter mass and Si also decreased with increasing elevation. Leaf and litter Si concentrations showed no difference between the two bedrock types without interaction with elevation. Due to large turnovers of species composition with elevation and bedrock types, most species occurred only in one plot. For 11 species that occurred at two or three plots, only one species showed a weakly significant difference in leaf Si concentration between bedrock types. Surface soil Si availability was greater at lower elevation plots and differed with bedrock types only at 1700 m. This pattern was consistent with a hypothesis that Si input via litter in the form of plant opal, rather than bedrock types, should influence the soluble Si in the upper soil horizons. These results suggest that Si cycling by vegetation is more active in lower elevation forests regardless of bedrock types, most likely because Si accumulating species are more abundant in lowland tropical forests.

Langfristige Entwicklung von zwei Waldgesellschaften im Białowieża-Urwald

2008 ◽  
Vol 159 (4) ◽  
pp. 80-90 ◽  
Author(s):  
Bogdan Brzeziecki ◽  
Feliks Eugeniusz Bernadzki
Keyword(s):  
Species Composition ◽  
Tree Species ◽  
Stand Structure ◽  
Temporal Dynamics ◽  
Structural Parameters ◽  
Forest Communities ◽  
Natural Forests ◽  
Tree Species Composition ◽  
Strong Trend ◽  
Long Term Study

The results of a long-term study on the natural forest dynamics of two forest communities on one sample plot within the Białowieża National Park in Poland are presented. The two investigated forest communities consist of the Pino-Quercetum and the Tilio-Carpinetum type with the major tree species Pinus sylvestris, Picea abies, Betula sp., Quercus robur, Tilia cordata and Carpinus betulus. The results reveal strong temporal dynamics of both forest communities since 1936 in terms of tree species composition and of general stand structure. The four major tree species Scots pine, birch, English oak and Norway spruce, which were dominant until 1936, have gradually been replaced by lime and hornbeam. At the same time, the analysis of structural parameters indicates a strong trend towards a homogenization of the vertical stand structure. Possible causes for these dynamics may be changes in sylviculture, climate change and atmospheric deposition. Based on the altered tree species composition it can be concluded that a simple ≪copying≫ (mimicking) of the processes taking place in natural forests may not guarantee the conservation of the multifunctional character of the respective forests.

Effects of nitrogen deposition on nitrate leaching from forests of the northeastern United States will change with tree species composition

2017 ◽  
Vol 47 (8) ◽  
pp. 997-1009 ◽  
Author(s):  
Katherine F. Crowley ◽  
Gary M. Lovett
Keyword(s):  
United States ◽  
Species Composition ◽  
Nitrate Leaching ◽  
Tree Species ◽  
N Deposition ◽  
Red Oak ◽  
Northeastern United States ◽  
Tree Species Composition ◽  
White Ash ◽  
Species Change

As tree species composition in forests of the northeastern United States changes due to invasive forest pests, climate change, or other stressors, the extent to which forests will retain or release N from atmospheric deposition remains uncertain. We used a species-specific, dynamic forest ecosystem model (Spe-CN) to investigate how nitrate (NO3–) leaching may vary among stands dominated by different species, receiving varied atmospheric N inputs, or undergoing species change due to an invasive forest pest (emerald ash borer; EAB). In model simulations, NO3– leaching varied widely among stands dominated by 12 northeastern North American tree species. Nitrate leaching increased with N deposition or forest age, generally with greater magnitude for deciduous (except red oak) than coniferous species. Species with lowest baseline leaching rates (e.g., red spruce, eastern hemlock, red oak) showed threshold responses to N deposition. EAB effects on leaching depended on the species replacing white ash: after 100 years, predicted leaching increased 73% if sugar maple replaced ash but decreased 55% if red oak replaced ash. This analysis suggests that the effects of tree species change on NO3– leaching over time may be large and variable and should be incorporated into predictions of effects of N deposition on leaching from forested landscapes.

scholarly journals Differences of tree species composition and microclimate between a mahogany(swietenia macrophyllaking) plantation and a secondary forest in Mt. Makiling, Philippines

2006 ◽  
Vol 2 (1) ◽  
pp. 1-12 ◽  
Author(s):  
Yong Kwon Lee ◽  
Don Koo Lee ◽  
Su‐Young Woo ◽  
Emmanuel Rodantes G. Abraham ◽  
Wilfredo M. Carandang ◽  
...  
Keyword(s):  
Species Composition ◽  
Tree Species ◽  
Secondary Forest ◽  
Tree Species Composition

scholarly journals TIMBER-FRAME STRUCTURE AND TREE SPECIES COMPOSITION OF A FARMHOUSE IN IIYAMA, IN THE CENTRAL JAPANESE SNOWBELT

2010 ◽  
Vol 16 (32) ◽  
pp. 387-392 ◽  
Author(s):  
Takahiro SHOJI ◽  
Hideyuki IDA ◽  
Toshikazu TSUCHIMOTO ◽  
Shigeo HOYANO
Keyword(s):  
Species Composition ◽  
Tree Species ◽  
Frame Structure ◽  
Tree Species Composition ◽  
Timber Frame

scholarly journals Tree Species Composition and Height-diameter Allometry of Three Forest Types in Northern Thailand

2018 ◽  
Vol 17 (4) ◽  
Author(s):  
Nuttaluck Khamyong ◽  
◽  
Prasit Wangpakapattanawong ◽  
Sutthathorn Chairuangsri ◽  
Angkhana Inta ◽  
...  
Keyword(s):  
Species Composition ◽  
Tree Species ◽  
Forest Types ◽  
Northern Thailand ◽  
Tree Species Composition
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