scholarly journals Complete Genome Sequences of Xanthomonas axonopodis pv. glycines Isolates from the United States and Thailand Reveal Conserved Transcription Activator-Like Effectors

2019 ◽  
Vol 11 (5) ◽  
pp. 1380-1384 ◽  
Author(s):  
Sara C D Carpenter ◽  
Lawan Kladsuwan ◽  
Sang-Wook Han ◽  
Sutruedee Prathuangwong ◽  
Adam J Bogdanove
Keyword(s):  
United States ◽  
Complete Genome ◽  
The United States ◽  
Transcription Activator ◽  
Genome Sequences ◽  
Xanthomonas Axonopodis

scholarly journals Complete Genome Sequences of Mycobacteriophages OKaNui and DroogsArmy

2020 ◽  
Vol 9 (33) ◽  
Author(s):  
Kayla M. Fast ◽  
Kadaisha G. Johnson ◽  
Kaitlyn N. Mayfield ◽  
Leah A. Stephens ◽  
T. Hunter Reid ◽  
...  
Keyword(s):  
United States ◽  
Mycobacterium Smegmatis ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
Bacterial Host ◽  
Content Type

ABSTRACT Mycobacteriophages OKaNui and DroogsArmy were isolated from soil using the bacterial host Mycobacterium smegmatis mc2155, which belongs to the phylum Actinobacteria. OKaNui was discovered in east Mississippi and DroogsArmy in west Alabama in the United States. The genomes of OKaNui and DroogsArmy were 51,424 bp and 53,254 bp long, respectively.

scholarly journals Near-Complete Genome Sequences of Several New Norovirus Genogroup II Genotypes

2018 ◽  
Vol 6 (6) ◽  
pp. e00007-18 ◽  
Author(s):  
Preeti Chhabra ◽  
Kshama Aswath ◽  
Nikail Collins ◽  
Tahmeed Ahmed ◽  
Maribel Paredes Olórtegui ◽  
...  
Keyword(s):  
United States ◽  
Acute Gastroenteritis ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
Stool Samples ◽  
Genotype Ii

ABSTRACTWe report here the near-complete genome sequences of 13 norovirus strains detected in stool samples from patients with acute gastroenteritis from Bangladesh, Ecuador, Guatemala, Peru, Nicaragua, and the United States that are classified into one existing (genotype II.22 [GII.22]), 3 novel (GII.23, GII.24 and GII.25), and 3 tentative novel (GII.NA1, GII.NA2, and GII.NA3) genotypes.

scholarly journals Coding-Complete Genome Sequences of Emerging Rabbit Hemorrhagic Disease Virus Type 2 Isolates Detected in 2020 in the United States

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
V. K. O’Donnell ◽  
L. Xu ◽  
K. Moran ◽  
F. Mohamed ◽  
T. Boston ◽  
...  
Keyword(s):  
United States ◽  
Disease Virus ◽  
Complete Genome ◽  
The United States ◽  
Rabbit Hemorrhagic Disease Virus ◽  
Hemorrhagic Disease ◽  
Genome Sequences ◽  
Rabbit Hemorrhagic Disease ◽  
Disease Virus Type

ABSTRACT Five rabbit hemorrhagic disease virus type 2 (RHDV2) coding-complete genome sequences were obtained from the livers of domestic and wild rabbits during the 2020 outbreak in the United States. These represent the first available RHDV2 sequences from the United States.

scholarly journals Near-Complete Genome Sequences of Vesicular Stomatitis Virus Isolates from the 2020 Outbreak in Kansas

2021 ◽  
Vol 10 (7) ◽  
Author(s):  
Tyler Doerksen ◽  
Edward Bird ◽  
Jamie Henningson ◽  
Rachel Palinski
Keyword(s):  
United States ◽  
Vesicular Stomatitis Virus ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
Vesicular Stomatitis ◽  
Virus Isolates

ABSTRACT Here, we report the near-complete genome sequences of vesicular stomatitis virus (VSV) serotype Indiana isolates from the 2020 U.S. outbreak. The sequences were obtained from swabs collected from Kansas horses in July and August. The four genome sequences help improve our understanding of VSV outbreak dynamics in the United States.

scholarly journals Complete Genome Sequences of Monongahela Hantavirus from Pennsylvania, USA

2018 ◽  
Vol 7 (11) ◽  
Author(s):  
César G. Albariño ◽  
Lisa Wiggleton Guerrero ◽  
Ayan K. Chakrabarti ◽  
Pierre E. Rollin ◽  
Stuart T. Nichol
Keyword(s):  
United States ◽  
West Virginia ◽  
Complete Genome ◽  
Clinical Case ◽  
The United States ◽  
Hantavirus Pulmonary Syndrome ◽  
Deer Mice ◽  
Genome Sequences ◽  
Complete Sequences

Monongahela hantavirus was first identified in deer mice and was later found responsible for hantavirus pulmonary syndrome cases in Pennsylvania and West Virginia in the United States. Here, we report the complete sequences of Monongahela virus S, M, and L genomic segments obtained from a fatal clinical case reported in 1997.

scholarly journals Complete Genome Sequences of Two Avilamycin-Resistant Enterococcus faecium Strains Isolated from Chicken in the United States

2019 ◽  
Vol 8 (47) ◽  
Author(s):  
S. Zhao ◽  
C. Li ◽  
S. Mukherjee ◽  
C. H. Hsu ◽  
R. Singh ◽  
...  
Keyword(s):  
United States ◽  
Enterococcus Faecium ◽  
Complete Genome ◽  
The United States ◽  
Multidrug Resistant ◽  
Genome Sequences ◽  
Content Type ◽  
Young Chicken

Avilamycin-resistant Enterococcus spp. have never been reported in the United States. Here, we report the complete genome sequences of two avilamycin-resistant (Avir) Enterococcus faecium strains isolated from a retail chicken and a cecal sample from a young chicken. Both isolates are multidrug resistant (MDR) and carry emtA on MDR plasmids.

scholarly journals Complete Genome Sequences of Priestia megaterium Type and Clinical Strains Feature Complex Plasmid Arrays

2021 ◽  
Vol 10 (27) ◽  
Author(s):  
Philip S. Shwed ◽  
J. Crosthwait ◽  
K. Weedmark ◽  
E. Hoover ◽  
F. Dussault
Keyword(s):  
United States ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
High Quality ◽  
Content Type ◽  
Clinical Strains ◽  
Human Samples

Here, we report the high-quality complete genome sequences and plasmid arrays of Priestia megaterium ATCC 14581 T and of two clinical strains (2008724129 and 2008724142) isolated from human samples in the United States.

scholarly journals Complete Genome Sequences of Three Fish-Associated Streptococcus agalactiae Isolates

2018 ◽  
Vol 6 (6) ◽  
pp. e00025-18 ◽  
Author(s):  
Anita Jaglarz ◽  
Artur Gurgul ◽  
William J. Leigh ◽  
Janina Z. Costa ◽  
Kim D. Thompson
Keyword(s):  
United States ◽  
Costa Rica ◽  
Streptococcus Agalactiae ◽  
Oreochromis Niloticus ◽  
Complete Genome ◽  
The United States ◽  
Whole Genome ◽  
Genome Sequences ◽  
Group B

ABSTRACTThe whole-genome sequences are described here for three group B Streptococcus (GBS) (S. agalactiae) serotype Ib isolates obtained from tilapia (Oreochromis niloticus) farmed at sites in Honduras, Costa Rica, and the United States. The bacteria were isolated from the brains of fish displaying signs of streptococcosis.

scholarly journals Complete Genome Sequences of Mumps and Measles Virus Isolates from Three States in the United States

2017 ◽  
Vol 5 (33) ◽  
Author(s):  
Laura C. Magaña ◽  
Alex Espinosa ◽  
Rachel L. Marine ◽  
Terry Fei Fan Ng ◽  
Christina J. Castro ◽  
...  
Keyword(s):  
United States ◽  
Complete Genome ◽  
Measles Virus ◽  
The United States ◽  
Mumps Virus ◽  
Full Length ◽  
Genome Sequences ◽  
Coding Sequence ◽  
Virus Genomes ◽  
Virus Isolates

ABSTRACT We report here the full coding sequence of nine paramyxovirus genomes, including two full-length mumps virus genomes (genotypes G and H) and seven measles virus genomes (genotypes B3 and D4, D8, and D9), from respiratory samples of patients from California, Virginia, and Alabama obtained between 2010 and 2014.

scholarly journals Complete Genome Sequences and Phylogenetic Analysis of West Nile Virus Strains Isolated from the United States, Europe, and the Middle East

Virology ◽  
2002 ◽  
Vol 298 (1) ◽  
pp. 96-105 ◽  
Author(s):  
Robert S. Lanciotti ◽  
Gregory D. Ebel ◽  
Vincent Deubel ◽  
Amy J. Kerst ◽  
Severine Murri ◽  
...  
Keyword(s):  
United States ◽  
Phylogenetic Analysis ◽  
West Nile Virus ◽  
Middle East ◽  
Complete Genome ◽  
The United States ◽  
Genome Sequences ◽  
West Nile ◽  
Virus Strains
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