Image segmentation of activated sludge phase contrast images using phase stretch transform

Microscopy ◽  
2018 ◽  
Vol 68 (2) ◽  
pp. 144-158 ◽  
Author(s):  
Raymond Bing Quan Ang ◽  
Humaira Nisar ◽  
Muhammad Burhan Khan ◽  
Chi-Yi Tsai
2019 ◽  
Vol 31 (6) ◽  
pp. 2013
Author(s):  
Li-Jie Zhao ◽  
Shi-Da Zou ◽  
Yu-Hong Zhang ◽  
Ming-Zhong Huang ◽  
Yue Zuo ◽  
...  

2015 ◽  
Vol 117 (18) ◽  
pp. 183102 ◽  
Author(s):  
Arjun S. Kumar ◽  
Pratiti Mandal ◽  
Yongjie Zhang ◽  
Shawn Litster

2017 ◽  
Vol 23 (6) ◽  
pp. 1130-1142 ◽  
Author(s):  
Muhammad Burhan Khan ◽  
Humaira Nisar ◽  
Choon Aun Ng ◽  
Kim Ho Yeap ◽  
Koon Chun Lai

AbstractImage processing and analysis is an effective tool for monitoring and fault diagnosis of activated sludge (AS) wastewater treatment plants. The AS image comprise of flocs (microbial aggregates) and filamentous bacteria. In this paper, nine different approaches are proposed for image segmentation of phase-contrast microscopic (PCM) images of AS samples. The proposed strategies are assessed for their effectiveness from the perspective of microscopic artifacts associated with PCM. The first approach uses an algorithm that is based on the idea that different color space representation of images other than red-green-blue may have better contrast. The second uses an edge detection approach. The third strategy, employs a clustering algorithm for the segmentation and the fourth applies local adaptive thresholding. The fifth technique is based on texture-based segmentation and the sixth uses watershed algorithm. The seventh adopts a split-and-merge approach. The eighth employs Kittler’s thresholding. Finally, the ninth uses a top-hat and bottom-hat filtering-based technique. The approaches are assessed, and analyzed critically with reference to the artifacts of PCM. Gold approximations of ground truth images are prepared to assess the segmentations. Overall, the edge detection-based approach exhibits the best results in terms of accuracy, and the texture-based algorithm in terms of false negative ratio. The respective scenarios are explained for suitability of edge detection and texture-based algorithms.


2011 ◽  
Vol 56 (3) ◽  
pp. 515-534 ◽  
Author(s):  
Marcus J Kitchen ◽  
David M Paganin ◽  
Kentaro Uesugi ◽  
Beth J Allison ◽  
Robert A Lewis ◽  
...  

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