scholarly journals Single-stranded DNA oligomers stimulate error-prone alternative repair of DNA double-strand breaks through hijacking Ku protein

2015 ◽  
pp. gkv894 ◽  
Author(s):  
Ying Yuan ◽  
Sébastien Britton ◽  
Christine Delteil ◽  
Julia Coates ◽  
Stephen P. Jackson ◽  
...  
2014 ◽  
Vol 70 (a1) ◽  
pp. C844-C844
Author(s):  
Wendan Ren ◽  
Hongxia Chen ◽  
Qiangzu Sun ◽  
Xuhua Tang ◽  
Siew Choo Lim ◽  
...  

The SOSS1 complex comprising SOSSA, SOSSB1 and SOSSC senses single-stranded DNA (ssDNA) and promotes repair of DNA double-strand breaks (DSBs). But how SOSS1 is assembled and recognizes ssDNA remains elusive. Crystal structure of the N-terminal half of SOSSA (SOSSAN) in complex with SOSSB1 and SOSSC showed that SOSSAN serves as a scaffold to bind both SOSSB1 and SOSSC for assembling the SOSS1 complex. The structures of SOSSAN/B1 in complex with a 12nt ssDNA and SOSSAN/B1/C in complex with a 35nt ssDNA showed that SOSSB1 interacts with both SOSSAN and ssDNA via two distinct surfaces. Recognition of ssDNA with a length up to nine nucleotides is solely mediated by SOSSB1 while neither SOSSC nor SOSSAN are critical for ssDNA binding. These results reveal the structural basis of SOSS1 assembly and provide a framework for further studying the mechanism governing longer ssDNA recognition by the SOSS1 complex during DSB repair.


2013 ◽  
Vol 46 (4) ◽  
pp. 323-348 ◽  
Author(s):  
Andrea Candelli ◽  
Mauro Modesti ◽  
Erwin J. G. Peterman ◽  
Gijs J. L. Wuite

AbstractAll organisms need homologous recombination (HR) to repair DNA double-strand breaks. Defects in recombination are linked to genetic instability and to elevated risks in developing cancers. The central catalyst of HR is a nucleoprotein filament, consisting of recombinase proteins (human RAD51 or bacterial RecA) bound around single-stranded DNA. Over the last two decades, single-molecule techniques have provided substantial new insights into the dynamics of homologous recombination. Here, we survey important recent developments in this field of research and provide an outlook on future developments.


2020 ◽  
Vol 64 (5) ◽  
pp. 765-777 ◽  
Author(s):  
Yixi Xu ◽  
Dongyi Xu

Abstract Deoxyribonucleic acid (DNA) is at a constant risk of damage from endogenous substances, environmental radiation, and chemical stressors. DNA double-strand breaks (DSBs) pose a significant threat to genomic integrity and cell survival. There are two major pathways for DSB repair: nonhomologous end-joining (NHEJ) and homologous recombination (HR). The extent of DNA end resection, which determines the length of the 3′ single-stranded DNA (ssDNA) overhang, is the primary factor that determines whether repair is carried out via NHEJ or HR. NHEJ, which does not require a 3′ ssDNA tail, occurs throughout the cell cycle. 53BP1 and the cofactors PTIP or RIF1-shieldin protect the broken DNA end, inhibit long-range end resection and thus promote NHEJ. In contrast, HR mainly occurs during the S/G2 phase and requires DNA end processing to create a 3′ tail that can invade a homologous region, ensuring faithful gene repair. BRCA1 and the cofactors CtIP, EXO1, BLM/DNA2, and the MRE11–RAD50–NBS1 (MRN) complex promote DNA end resection and thus HR. DNA resection is influenced by the cell cycle, the chromatin environment, and the complexity of the DNA end break. Herein, we summarize the key factors involved in repair pathway selection for DSBs and discuss recent related publications.


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