scholarly journals A Virus Related to Clover Yellow Mosaic Virus Found East of the Mississippi River in Verbena canadensis in Florida

Plant Disease ◽  
2004 ◽  
Vol 88 (2) ◽  
pp. 223-223 ◽  
Author(s):  
C. A. Baker ◽  
K. Beckham ◽  
E. Hiebert
Keyword(s):  
Mosaic Virus ◽  
Cucumis Sativus ◽  
Sodium Dodecyl ◽  
Yellow Mosaic Virus ◽  
Eastern United States ◽  
Rt Pcr ◽  
Leaf Extracts ◽  
Degenerate Primers ◽  
Chenopodium Amaranticolor ◽  
Clover Yellow Mosaic Virus

In September 2002, several unthrifty Verbena canadensis ‘Homestead purple’ plants were received at the Division of Plant Industry in Gainesville, FL. Symptoms included very subtle yellowing and distortion or stunting of the younger leaves, symptoms that could be overlooked as a nutritional problem. Symptomatic leaves were ground in phosphate buffer and mechanically inoculated to a variety of plants that included Antirrhinum majus, Chenopodium amaranticolor, Datura stramonium, Gomphrena globosa, Pisum sativum, Trifolium pratense, T. repens, Vicia faba, and Vigna unguiculata. These hosts showed symptoms similar to those described for infection by Clover yellow mosaic virus (ClYMV) (3). In addition, the virus systemically infected Arachis hypogaea, Catharanthus roseus, C. quinoa, Nicotiana benthamiana, and healthy seed-grown Verbena × hybrida. No symptoms were seen in inoculated Zinnia elegans, N. glutinosa, N. clevelandii, Lycopersicon esculentum, Cucumis sativus, or Capsicum annuum. However, back inoculations of Cucumis sativus to C. amaranticolor gave typical local and systemic symptoms. Microscopic examination of leaf strips of infected V. faba revealed banded inclusions typical of the genus Potexvirus (1). Reverse-transcription polymerase chain reaction (RT-PCR) using degenerate primers for the genus Potexvirus (2) produced a 750-bp product that is the expected product for the genus Potexvirus. The RT-PCR product was cloned in pGem-T easy (Promega, Madison, WI) and sequenced. BLAST ( http://www.ncbi.nlm.nih.gov/ BLAST/ ) analysis of the sequence showed an 82% identity at the nucleotide level with the RNA polymerase gene of ClYMV. Leaf extracts of the original verbena, several inoculated hosts, and a known sample of ClYMV in N. benthamiana were tested in sodium dodecyl sulfate immunodiffusion (4) against antiserum to the degraded capsid protein of ClYMV. A reaction of identity was seen with infected samples but not with samples for comparable virus-free plants. To our knowledge, this is the first time this virus has been found in the eastern United States. It is not known how or if the presence of this noninsect transmitted virus in an ornamental will affect the agricultural, forage, or ornamental industries in the east or how widely distributed Verbena sp. infected with this virus may be at this time. References: (1.) R. G. Christie and J. R. Edwardson. Fla. Agric. Exp. Stn. Monogr. 9, 1994. (2.) A. Gibbs et al. J. Virol. Methods 74:67,1998 (3.) M. J. Pratt. Can. J. Bot. 39:655. 1961. (4) D. E. Purcifull and D. L. Batchelor. Fla. Agric. Ext. Stn. Bull. 788, 1977.

scholarly journals Detection of Two Bipartite Geminiviruses Infecting Dicotyledonous Weeds in Trinidad

Plant Disease ◽  
2003 ◽  
Vol 87 (5) ◽  
pp. 602-602 ◽  
Author(s):  
S. N. Rampersad ◽  
P. Umaharan
Keyword(s):  
Mosaic Virus ◽  
Large Scale ◽  
Blot Hybridization ◽  
Yellow Mosaic Virus ◽  
Leaf Margin ◽  
Weed Species ◽  
Dot Blot ◽  
Leaf Extracts ◽  
Degenerate Primers ◽  
Sequence Comparisons

Severe symptoms of suspected geminivirus etiology were manifested as intense yellow or golden mottling or mosaic of the lamina accompanied by mild leaf margin distortion on dicotyledonous weed species, Sida rhombifolia (L.) and Rhynchosia minima (L.), collected from 1999 to 2002 from the northeastern and central regions of Trinidad. S. rhombifolia is a common roadside weed while R. minima may have been introduced through restricted cultivation as a forage legume for livestock. Potato yellow mosaic virus-Trinidad isolate (PYMV-TT) has been implicated as the primary causal agent of begomoviral disease in large-scale tomato cultivation in Trinidad (2). It has been suggested that these weeds may be alternative hosts to PYMV-TT. However, all samples tested negative for PYMV-TT in dot blot hybridization assays using a PYMV-TT-specific DNA-A probe under high stringency. These results excluded the presence of PYMV-TT in these weeds. Polymerase chain reaction (PCR) amplification using clarified leaf extracts with degenerate primers for DNA-A (MP16 and MP82, PAL1v1978 and PAR1c715, and prV324 and prC889) and for DNA-B (PBL1v2040 and PCRc1) was performed on the weed samples (S. N. Rampersad and P. Umaharan, unpublished). Degenerate primers MP16 and MP82 target the 5′ terminal region of the coat protein (cp) (2); PAL1v1978 and PAR1c715 direct amplification of the replication-associated protein gene (rep) and part of the cp gene (1); prV324 and prC889 amplify the core cp sequence (3). Primers PBL1v2040 and PCRc1 target the intergenic region and the 5′ terminal of the BL1 ORF (1). PCR fragments obtained through amplification using this primer pair confirmed the presence of a DNA-B component for the unknown viruses. PCR fragments were sequenced and alignments were performed using DNASTAR (DNASTAR Inc., Madison, WI) and BLASTN ( www.ncbi.nlm.nih.gov/blast/ ) programs. None of the partial nucleotide sequences obtained for the viruses produced significant alignments with each other (5′ terminal cp: 74% identity; core cp sequence: 78% identity), suggesting the detection of two distinct viruses. In addition, the partial sequences obtained were aligned to sequences of homologous regions of 11 New World begomoviruses (from the major representative clusters). The nearest match for R. minima, using alignments with 5′ terminal cp (GenBank Accession No. AY221124), core cp (GenBank Accession No. AY217344), and 5′ terminal BL1 region (GenBank Accession No. AY220490) was obtained for Rhynchosia golden mosaic virus (RhGMV, GenBank Accession Nos. AF408199 and AF442117) with 84 and 88% identity. There were no significant similarities found for sequence comparisons of the BL1 ORF. For S. rhombifolia, the highest homology using the 5′ terminal cp (GenBank Accession No. AY220489), core cp (GenBank Accession No. AY217345), rep/cp region (GenBank Accession No. AY220488), and the 5′ terminal BL1 region (GenBank Accession No. AY221125) was obtained for Sida golden mosaic virus (SiGMV, GenBank Accession Nos. AF049336, AF070923, and Y11100), with 82, 89, 84, and 87% identity. To our knowledge, this is the first report of geminivirus infection in these weed species in Trinidad. This may have substantial implications to future geminivirus disease outbreaks especially if there is expansion of the host range of these viruses to include economically important crops. References: (1) M. R. Rojas et al. Plant Dis. 77:340, 1993. (2) P. Umaharan et al. Phytopathology 88:1262, 1998. (3) S. D. Wyatt and J. K. Brown. Phytopathology 86:1288, 1996.

scholarly journals First Report of Zucchini yellow mosaic virus in Argentina

Plant Disease ◽  
2000 ◽  
Vol 84 (3) ◽  
pp. 371-371 ◽  
Author(s):  
O. Gracia
Keyword(s):  
Host Range ◽  
Mosaic Virus ◽  
Disease Incidence ◽  
Sodium Dodecyl ◽  
Zucchini Yellow Mosaic Virus ◽  
Chenopodium Quinoa ◽  
Yellow Mosaic Virus ◽  
Watermelon Mosaic Virus ◽  
Mechanical Transmission ◽  
Chenopodium Amaranticolor

In August 1996, a severe viral disease occurred in squash produced in the subtropical Province of Salta, Argentina. Plants of Cucurbita pepo L. (zucchini) and Cucurbita maxima L. ‘Any’ were affected. Approximately 50% of the plants showed prominent yellow mosaic, necrosis, and foliar distortion. Most of the fruits on infected plants were small, with scattered glossy yellow knobs over a green background, and some showed additional fruit malformation. A potyvirus was isolated from infected plants by mechanical transmission. Filamentous particles were associated with symptomatic inoculated squash and cucumber plants in leaf-dip preparations with an electron microscope (Elmisckop I, Siemens, Germany). The particles were flexuous rods ≈755 nm long. The host range of the isolated virus was mostly limited to the cucurbits (systemic infection) but also included Gomphrena globosa (local and systemic symptoms) and Chenopodium quinoa and Chenopodium amaranticolor, which showed only local chlorotic lesions. Twenty species in the Compositae, Leguminosae, and Solanaceae were not infected (2). In agar double-diffusion tests with sodium dodecyl sulfate (SDS)-degraded virus particles, no reactions were observed with Papaya ringspot virus, Watermelon mosaic virus (WMV), and WMV-Mo antisera, but a strong precipitin line was obtained with the antiserum prepared by Purcifull (1) for isolate 1119 of Zucchini yellow mosaic virus (ZYMV). Isolate 1119 and our isolate appeared serologically indistinguishable in SDS immunodiffusion tests. Both gave fused precipitin bands without spur formation. The results (field symptoms, transmissibility, host range, particle morphology, and serology) lead to the conclusion that ZYMV is present in Argentina. Since 1996, outbreaks have occurred every year in Salta, devastating squash crops. In 1998, ZYMV also was found in the provinces of Mendoza and San Juan, infecting zucchini squash and melons (Cucumis melo L.). A survey of crops indicates that disease incidence and severity were lower than in Salta. References: (1) D. E. Purcifull et al. Plant Dis. 68:230, 1984. (2) H. L. Wang. Plant Dis. 76:530, 1992.

scholarly journals First Report of Freesia sneak virus in Freesia sp. in Virginia

Plant Disease ◽  
2009 ◽  
Vol 93 (9) ◽  
pp. 965-965 ◽  
Author(s):  
A. M. Vaira ◽  
M. A. Hansen ◽  
C. Murphy ◽  
M. D. Reinsel ◽  
J. Hammond
Keyword(s):  
Nucleic Acid ◽  
Mosaic Virus ◽  
The United States ◽  
Research Unit ◽  
Yellow Mosaic Virus ◽  
Cdna Clones ◽  
Rt Pcr ◽  
Degenerate Primers ◽  
First Report ◽  
Leaf Necrosis

In the spring of 2008, freesia, cvs. Honeymoon and Santana, with striking virus-like symptoms similar to freesia leaf necrosis disease were received by the Virginia Tech Plant Disease Clinic from a cut-flower nursery in Gloucester, VA and forwarded for analysis to the USDA-ARS Floral and Nursery Plants Research Unit in Beltsville, MD. Approximately 25% of the plants had coalescing, interveinal, chlorotic, whitish, necrotic or dark brown-to-purple necrotic spots on leaves. Symptomatic plants were scattered within the planting. Fifteen symptomatic plants were collected between March and May of 2008, and nucleic acid extracts were analyzed for ophiovirus infection by reverse transcription (RT)-PCR with ophiovirus-specific degenerate primers (2). The diagnostic 136-bp ophiovirus product from the RdRp gene was amplified from 14 of 15 freesia plants tested. A partially purified virus preparation was analyzed by transmission electron microscopy and potyvirus- and ophiovirus-like particles were detected. The potyviruses, Freesia mosaic virus (FreMV) and Bean yellow mosaic virus (BYMV), each cause mosaic symptoms (3), although BYMV may induce necrosis late in the season. RT-PCR performed on the same nucleic acid samples using potyvirus coat protein (CP)-specific degenerate primers D335 and U335 (1) amplified the diagnostic 335-bp fragment from 2 of 15 plants. Cloned sequence from these plants was identified as FreMV. The ophiovirus CP gene was amplified by RT-PCR and cloned from two symptomatic freesia plants using primers FreSVf-CP-XhoI 5′-GACTCGAGAAATGTCTGGAAAATACTCTGTTC-3′ and FreSVf-CP-BamHI 5′-CCAGGATCCTTAGATAGTGAATCCATAAGCTG-3′, based on the sequence of Freesia sneak virus (FreSV) isolates from freesia (GenBank No. DQ885455) and lachenalia (4). The approximate 1.3-kb amplicon was cloned and sequences of two cDNA clones were identical (GenBank No. FJ807730). The deduced amino acid sequence showed 99% identity with the Italian FreSV CP sequence (GenBank No. DQ885455), confirming FreSV in the symptomatic freesia plants. To our knowledge, this is the first report of FreSV in Virginia and the United States. Soilborne freesia leaf necrosis disease has been reported in Europe since the 1970s (3); several viral causal agents have been hypothesized but recent findings correlate best with the ophiovirus. In Virginia, the presence of FreSV, but not FreMV, was strongly correlated with the leaf necrosis syndrome. FreSV, likely soilborne through Olpidium brassicae, may pose a new soilborne threat for bulbous ornamentals, since it has been recently detected also in Lachenalia spp. (Hyacinthaceae) from South Africa (4). Although specific testing of O. brassicae was not performed, the disease may potentially persist in the soil for years in O. brassicae resting spores and development of symptoms may be affected by environmental conditions (3). References: (1) S. A. Langeveld et al. J. Gen. Virol. 72:1531, 1991. (2) A. M. Vaira et al. Arch.Virol. 148:1037, 2003. (3) A. M. Vaira et al. Acta Hortic. 722:191, 2006. (4) A. M. Vaira et al. Plant Dis. 91:770, 2007.

scholarly journals Susceptibility of ten red clover (Trifolium pratense) cultivars to six viruses after artificial inoculation

2014 ◽  
Vol 50 (No. 3) ◽  
pp. 113-118 ◽  
Author(s):  
J. Fránová ◽  
H. Jakešová
Keyword(s):  
Mosaic Virus ◽  
Trifolium Pratense ◽  
Alfalfa Mosaic Virus ◽  
Red Clover ◽  
Yellow Mosaic Virus ◽  
Mechanical Inoculation ◽  
Rt Pcr ◽  
Trifolium Pratense L ◽  
Clover Yellow Mosaic Virus ◽  
White Clover Mosaic Virus

Seedlings of Trifolium pratense L. cultivars were mechanically inoculated with Czech isolates of Alfalfa mosaic virus (AMV), Clover yellow mosaic virus (ClYMV), Clover yellow vein virus (ClYVV), Red clover mottle virus (RCMV), White clover mosaic virus (WClMV), and a newly discovered member of the Cytorhabdovirus genus. WClMV infected 75.4% of clover seedlings; cv. Rezista was the most susceptible (93.3%), while cv. Fresko was the least susceptible (58.3%). RCMV infected 59.6% of plants; the most susceptible was cv. Tempus (77.6%), the least susceptible cv. Sprint (38.3%). While WClMV infected a higher number of seedlings, RCMV revealed more severe symptoms on affected plants. On the basis of ELISA and RT-PCR results, no cultivar was susceptible to mechanical inoculation with ClYMV and cytorhabdovirus. Moreover, cvs Fresko and Sprint were not susceptible to ClYVV and AMV, respectively.

scholarly journals First Record of Alfalfa mosaic virus in Teucrium fruticans in Italy

Plant Disease ◽  
2012 ◽  
Vol 96 (2) ◽  
pp. 294-294 ◽  
Author(s):  
G. Parrella ◽  
L. Cavicchi ◽  
M. G. Bellardi
Keyword(s):  
Mosaic Virus ◽  
Consensus Sequence ◽  
Protein A ◽  
Alfalfa Mosaic Virus ◽  
Pairwise Comparison ◽  
Geographic Area ◽  
Rt Pcr ◽  
Leaf Extracts ◽  
Chenopodium Amaranticolor ◽  
Bright Yellow

The Teucrium genus (Lamiaceae family) contains ~300 species of evergreen and deciduous shrubs with some species widely used as ornamental plants in rock gardens. During the springs of 2010 and 2011, some plants of Teucrium fruticans L., also known as “tree germander”, growing singly in pots in a Ligurian nursery (Savona Province, northern Italy), were noted for a bright yellow calico mosaic on the leaves (~1% of ~2,000 plants inspected exhibited symptoms). Preliminary electron microscope observations of leaf-dips showed semispherical to bacilliform particles, consistent with Alfamovirus and Oleavirus, in preparations obtained only from leaves of symptomatic plants. Three symptomatic and two asymptomatic plants were checked for Cucumber mosaic virus or Alfalfa mosaic virus (AMV) in protein A sandwich (PAS)-ELISA with commercial kits (Bioreba, Reinach, Switzerland) and Olive latent virus 2 (OLV2) by immunodecoration of virus particles with an OLV2 antiserum produced against an Italian OLV2 isolate. Symptomatic plants were positive only to AMV and all asymptomatic plants were negative to all viruses checked. The virus was successfully transmitted mechanically to Chenopodium amaranticolor and Ocimum basilicum that reacted, as expected for infections caused by AMV (1), with a chlorotic local lesion followed by mosaic and bright yellow mosaic, respectively. The disease was transmitted also by grafting an infected scion on healthy T. fruticans. Symptoms appeared after ~3 weeks in one plant of six grafted. AMV infection in a symptomatic grafted plant was verified by PAS-ELISA, confirming that bright yellow mosaic symptoms observed in T. fruticans were induced by an isolate of AMV. Immunocapture reverse transcription (IC-RT)-PCR assay, following the protocol described by Wetzel et al. (4), was performed on leaf extracts from one symptomatic plant using a polyclonal serum raised against a French isolate of AMV, provided by H. Lot (INRA, Station de Pathologie Végétale, Avignon, France). Specific AMV primer pair was used in the RT-PCR reactions (2). A DNA fragment of ~750 bp, covering the entire coat protein gene (CP), was obtained after IC-RT-PCR. The amplicon was gel purified with the Wizard SV Gel and PCR Clean-Up System (Promega, Madison, WI), cloned into pGEMT-easy vector (Promega) and two independent clones sequenced on both strands at MWG Biotech (Ebersberg, Germany). The consensus sequence was submitted to EMBL (No. FR854391). Pairwise comparison of the AMV-T. fruticans isolate CP sequence (named Tef-1) with those of AMV reference isolates revealed the maximum (98.0 to 97.3%) nucleotide identities with isolates belonging to subgroup I, 95.5 to 94.0% identities with subgroup IIA isolates, and 95.6% identity with the subgroup IIB isolate Tec-1 (3). Among subgroup I isolates, Tef-1 had the maximum CP nucleotide identity with the CP gene belonging to an AMV isolate identified in 2010 in Lavandula stoechas in the same geographic area, suggesting a common origin for these two viral isolates. Overall results clearly indicate that an AMV isolate was the causal agent of the calico-type mosaic observed in T. fruticans. To our knowledge, this is the first report of T. fruticans as a natural host of AMV. References: (1) G. Marchoux et al. Page 163 in: Virus des Solanacées. Quae éditions, Versailles, 2008. (2) G. +Parrella et al. Arch. Virol. 145:2659, 2000. (3) G. Parrella et al. Arch. Virol. 156:1049, 2011. (4) T. Wetzel et al. J. Virol. Methods 39:27, 1992.

scholarly journals Allamanda Mosaic Caused by Cucumber mosaic virus in Taiwan

Plant Disease ◽  
2005 ◽  
Vol 89 (5) ◽  
pp. 529-529 ◽  
Author(s):  
Y. K. Chen ◽  
C. C. Yang ◽  
H. T. Hsu
Keyword(s):  
Cucumber Mosaic Virus ◽  
Mosaic Virus ◽  
Polyacrylamide Gel Electrophoresis ◽  
Sodium Dodecyl ◽  
Chenopodium Quinoa ◽  
Rabbit Antiserum ◽  
Nucleotide Sequence Analysis ◽  
Enzyme Linked Immunosorbent Assay ◽  
Rt Pcr ◽  
Indicator Plants

Allamanda (Allamanda cathartica L., family Apocynaceae) is native to Brazil and is a popular perennial shrub or vine ornamental in Taiwan. Plants showing severe mosaic, rugosity, and leaf distortion symptoms on leaves are common in commercial nurseries and private gardens. Examination of crude sap prepared from symptomatic leaves using an electron microscope revealed the presence of spherical virus particles with a diameter of approximately 28 nm. The virus was mechanically transmitted to indicator plants and induced symptoms similar to those incited by Cucumber mosaic virus (CMV). The virus caused local lesions on inoculated leaves of Chenopodium quinoa and C. amaranticolor and systemic mosaic in Cucumis sativus, Lycopersicon esculentum, Nicotiana benthamiana, N. glutinosa, N. rustica, and N. tabacum. On N. tabacum, necrotic ringspots developed on inoculated leaves followed by systemic mosaic. Tests of leaf sap extracted from naturally infected allamanda and inoculated indicator plants using enzyme-linked immunosorbent assay were positive to rabbit antiserum prepared to CMV. Viral coat protein on transblots of sodium dodecyl sulfate-polyacrylamide gel electrophoresis reacted with CMV subgroup I specific monoclonal antibodies (2). With primers specific to the 3′-half of RNA 3 (1), amplicons of an expected size (1,115 bp) were obtained in reverse transcription-polymerase chain reaction (RT-PCR) using total RNA extracted from infected allamanda and N. benthamiana. The amplified fragment (EMBL Accession No. AJ871492) was cloned and sequenced. It encompasses the 3′ part of the intergenic region of RNA 3 (158 nt), CP ORF (657 nt), and 3′ NTR (300 nt) showing 91.8–98.9% and 71.4–72.8% identities to those of CMV in subgroups I and II, respectively. Results of MspI-digested restriction fragment length polymorphism patterns of the RT-PCR fragment and the nucleotide sequence analysis indicate that the CMV isolate from allamanda belongs to subgroup IB, which is predominant on the island. To our knowledge, CMV is the only reported virus that infects allamanda and was first detected in Brazil (3), and this is the first report of CMV infection in allamanda plants occurring in Taiwan. References: (1) Y. K. Chen et al. Arch. Virol. 146:1631, 2001. (2) H. T. Hsu et al. Phytopathology 90:615, 2000. (3) E. W. Kitajima. Acta. Hortic. 234:451, 1988.

scholarly journals First Report of Yam mild mosaic virus in Yam in Guangxi Province, China

Plant Disease ◽  
2011 ◽  
Vol 95 (10) ◽  
pp. 1320-1320 ◽  
Author(s):  
C. Zou ◽  
J. Meng ◽  
Z. Li ◽  
M. Wei ◽  
J. Song ◽  
...  
Keyword(s):  
Mosaic Virus ◽  
Viral Genome ◽  
Terminal Region ◽  
Mild Mosaic ◽  
Rt Pcr ◽  
Degenerate Primers ◽  
Germplasm Exchange ◽  
First Report ◽  
Pcr Products ◽  
Mild Mosaic Virus

Yams (Dioscorea spp.) are widely grown in China as vegetables and herbal medicine. However, studies on viral diseases on yams are still limited. As a pilot project of a government initiative for improving yam productivity, a small study was conducted in Guangxi, a southern province of China, on viral disease in yams. Incidence of virus-like disease for the three extensively grown D. alata cultivars, GH2, GH5, and GH6, were 12 to 40%, 12 to 29%, and 11 to 25%, respectively, as found in a field survey with a five-plot sampling method in 2010. A total of 112 leaf samples showing mosaic or mottling or leaves without symptoms were collected from the cvs. GH2, GH5, GH6, and seven additional cultivars (D. alata cvs. GY2, GY23, GY47, GY69, GY62, GY72, and D. batatas cv. Tiegun). To determine if the symptoms were caused by Yam mild mosaic virus (YMMV; genus Potyvirus, family Potyviridae), total RNA was extracted from leaves with a commercial RNA purification kit (TIANGEN, Beijing, China), and reverse-transcription (RT)-PCR was conducted with a YMMV-specific primer pair (4) that amplifies the 3′-terminal portion of the viral genome. A PCR product with the predicted size of 262 bp was obtained from samples of GH5 (number testing positive of total number of leaves = 5 of 12), GH6 (24 of 42), and GY72 (1 of 1), but not from asymptomatic leaves. PCR products from a GH5 sample (YMMV-Nanning) and a GH6 sample (YMMV-Luzhai) were cloned and sequenced using an ABI PRISM 3770 DNA Sequencer. The two PCR products were 97% identical at nucleotide (nt) level and with the highest homology (89% identity) to a YMMV isolate (GenBank Accession No. AJ305466). To further characterize the isolates, degenerate primers (2) were used to amplify viral genome sequence corresponding to the C-terminal region of the nuclear inclusion protein b (NIb) and the N-terminal region of the coat protein (CP). These 781-nt fragments were sequenced and a new primer, YMMV For1 (5′-TTCATGTCGCACAAAGCAGTTAAG-3′) corresponding to the NIb region, was designed and used together with primer YMMV UTR 1R to amplify a fragment that covers the complete CP region of YMMV by RT-PCR. These 1,278-nt fragments were sequenced (GenBank Accession Nos. JF357962 and JF357963). CP nucleotide sequences of the YMMV-Nanning and YMMV-Luzhai isolates were 94% similar, while amino acid sequences were 99% similar. BLAST searches revealed a nucleotide identity of 82 to 89% and a similarity of 88 to 97% for amino acids to sequences of YMMV isolates (AF548499 and AF548519 and AAQ12304 and BAA82070, respectively) in GenBank. YMMV is known to be prevalent on D. alata in Africa and the South Pacific, and has recently been identified in the Caribbean (1) and Colombia (3). To our knowledge, this is the first report of the natural occurrence of YMMV in China and it may have implications for yam production and germplasm exchange within China. References: (1) M. Bousalem and S. Dallot. Plant Dis. 84:200, 2000. (2) D. Colinet et al. Phytopathology 84:65, 1994. (3) S. Dallot et al. Plant Dis. 85:803, 2001. (4) R. A. Mumford and S. E. Seal. J. Virol. Methods 69:73, 1997.

scholarly journals Tropical soda apple mosaic virus Identified in Solanum capsicoides in Florida

Plant Disease ◽  
2007 ◽  
Vol 91 (9) ◽  
pp. 1204-1204 ◽  
Author(s):  
S. Adkins ◽  
G. McAvoy ◽  
E. N. Rosskopf
Keyword(s):  
Sequence Analysis ◽  
Mosaic Virus ◽  
Sandwich Elisa ◽  
Tomato Mosaic Virus ◽  
Rt Pcr ◽  
Degenerate Primers ◽  
Lee County ◽  
Cp Gene ◽  
Local Lesions ◽  
Tropical Soda Apple

Red soda apple (Solanum capsicoides All.), a member of the Solanaceae, is a weed originally from Brazil (3). It is a perennial in southern Florida and is characterized by abundant prickles on stems, petioles, and leaves. Prickles on stems are more dense than those on its larger, noxious weed relative, tropical soda apple (Solanum viarum Dunal), and the mature red soda apple fruits are bright red in contrast to the yellow fruits of tropical soda apple (2). Virus-like foliar symptoms of light and dark green mosaic were observed on the leaves of a red soda apple in a Lee County cow pasture during a tropical soda apple survey during the fall of 2004. The appearance of necrotic local lesions following inoculation of Nicotiana tabacum cv. Xanthi nc with sap from the symptomatic red soda apple leaves suggested the presence of a tobamovirus. Tropical soda apple mosaic virus (TSAMV), a recently described tobamovirus isolated from tropical soda apple in Florida, was specifically identified by a double-antibody sandwich-ELISA (1). An additional six similarly symptomatic red soda apple plants were later collected in the Devils Garden area of Hendry County. Inoculation of N. tabacum cv. Xanthi nc with sap from each of these symptomatic plants also resulted in necrotic local lesions. Sequence analysis of the TSAMV coat protein (CP) gene amplified from total RNA by reverse transcription (RT)-PCR with a mixture of upstream (SolA5′CPv = 5′-GAACTTWCAGAAGMAGTYGTTGATGAGTT-3′; SolB5′CPv = 5′-GAACTCACTGARRMRGTTGTTGAKGAGTT-3′) and downstream (SolA3′CPvc = 5′-CCCTTCGATTTAAGTGGAGGGAAAAAC-3′; SolB3′CPvc = 5′-CGTTTMKATTYAAGTGGASGRAHAAMCACT-3′) degenerate primers flanking the CP gene of Solanaceae-infecting tobamoviruses confirmed the presence of TSAMV in all plants from both locations. Nucleotide and deduced amino acid sequences of the 483-bp CP gene were both 98 to 99% identical to the original TSAMV CP gene sequences in GenBank (Accession No. AY956381). TSAMV was previously identified in tropical soda apple in these two locations in Lee and Hendry counties and three other areas in Florida (1). Sequence analysis of the RT-PCR products also revealed the presence of Tomato mosaic virus in the plant from Lee County. To our knowledge, this represents the first report of natural TSAMV infection of any host other than tropical soda apple and suggests that TSAMV may be more widely distributed in solanaceous weeds than initially reported. References: (1) S. Adkins et al. Plant Dis. 91:287, 2007. (2) N. Coile. Fla. Dep. Agric. Consum. Serv. Div. Plant Ind. Bot. Circ. 27, 1993. (3) U.S. Dep. Agric., NRCS. The PLANTS Database. National Plant Data Center. Baton Rouge, LA. Published online, 2006.

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