scholarly journals Importance and Genetic Diversity of Vegetable-Infecting Tospoviruses in India

2011 ◽  
Vol 101 (3) ◽  
pp. 367-376 ◽  
Author(s):  
Suresh R. Kunkalikar ◽  
Sudarsana Poojari ◽  
Bhanupriya M. Arun ◽  
Prem A. Rajagopalan ◽  
Tsung-Chi Chen ◽  
...  

A survey for Peanut bud necrosis virus (PBNV), Watermelon bud necrosis virus (WBNV), Capsicum chlorosis virus (CaCV), and Iris yellow spot virus (IYSV) was conducted between 2002 and 2009 in the major vegetable-growing areas in India. PBNV was documented widely in tomato and chili peppers in 14 states representing southern, north-western, north-eastern, and central regions and WBNV was predominantly detected in watermelons and cucurbits in all except north-eastern regions. In addition, the expanded host range of PBNV to watermelons and other cucurbits and WBNV to tomato and chili peppers was observed leading to natural mixed infection of the two viruses. IYSV was found in onion in southern, central, and north-eastern regions and CaCV in tomato and chili peppers in northern and southern regions, respectively. Phylogenetic analysis of the nucleocapsid gene revealed segregation of field isolates of PBNV and WBNV into two distinct subclades, whereas isolates of CaCV and IYSV each clustered into a single clade. A proposal for establishing WBNV as a distinct tospovirus species is made based on the molecular characterization of small- (S) and medium- (M) RNA segments.

HortScience ◽  
2017 ◽  
Vol 52 (9) ◽  
pp. 1164-1167 ◽  
Author(s):  
Kwanjai Pipatchartlearnwong ◽  
Akarapong Swatdipong ◽  
Supachai Vuttipongchaikij ◽  
Somsak Apisitwanich

Asian Palmyra palm, found throughout south and southeast Asia, is important for local economies, especially for sugar palm production. Unlike its related species, such as oil palm and coconut, only a few genetic markers are available for Asian Palmyra palm. In this study, we tested the transferability of molecular markers derived from oil palm, and a set of selected markers were used for evaluating the diversity of Asian Palmyra palm growing in Thailand. From 545 primer pairs of expressed sequence tag-simple sequence repeat (EST-SSR) and genomic simple sequence repeat (gSSR) markers, 317 (58.17%) primer pairs were able to amplify the Asian Palmyra palm DNA, and 19 (5.99%) pairs were polymorphic. After extensively genotyping 164 samples from 12 populations, we obtained 25 loci with the polymorphic information content (PIC) average of 0.37 and allele numbers ranging from one to five. The observed and expected heterozygosity ranged from 0 to 1 and 0 to 0.76, respectively. A dendrogram showed separation of the palm populations into two clades, between north-eastern and southern-central regions. This study provides a set of microsatellite markers for use in further genetic studies of Asian Palmyra palm.


Aquaculture ◽  
2021 ◽  
pp. 736846
Author(s):  
Venkata Satyanarayana Nallala ◽  
M. Makesh ◽  
K. Radhika ◽  
T. Sathish Kumar ◽  
P. Raja ◽  
...  

Plant Disease ◽  
2014 ◽  
Vol 98 (2) ◽  
pp. 285-285 ◽  
Author(s):  
L. M. L. Duarte ◽  
M. A. V. Alexandre ◽  
D. Gobatto ◽  
E. W. Kitajima ◽  
R. Harakava

In November 2012, plants of Russell prairie gentian (Eustoma grandiflorum, Lisianthus russellianus) were collected from a commercial greenhouse in Atibaia, SP, Brazil, displaying necrotic spots on leaves and necrosis on stems, followed by generalized systemic necrosis. Disease symptom incidence was estimated at 10%. Preliminary electron microscopy observations of negatively stained leaf extracts prepared from those lesions revealed the presence of a large number of spherical tospovirus-like, approximately 100 nm in diameter. Samples of infected leaves were ground in 0.01 M phosphate buffer containing 0.5% sodium sulphide and mechanically inoculated in six plants of each species of Nicotiana glutinosa, N. tabacum cv. White Burley, N. megalosiphon, N. debneyii, Datura stramonium, Chenopodium amaranticolor, C. quinoa, and E. grandiflorum. All inoculated plants displayed local lesions 4 to 5 days after inoculation, while N. debneyii and D. stramonium showed systemic symptoms, typical of Tospovirus infection. In addition, E. grandiflorum reproduced the original symptoms. Total RNA was extracted from infected E. grandiflorum and D. stramonium, and reverse transcription (RT)-PCR was performed using universal primers BR60 and BR65 (2) targeting conserved regions of the nucleocapsid gene (N). The amplification products of approximately 450 bp were purified, cloned, and sequenced. The unknown virus was identified as Chrysanthemum stem necrosis virus (CSNV-Lis) based on host range and nucleotide sequence (Genbank Accession No. KC894721) and showed 99% identity with a CSNV chrysanthemum isolate from Japan (AB600872). Maximum likelihood phylogenetic analysis using nine homologous CSNV sequences available in GenBank classified CSNV-Lis into a monophyletic group formed by chrysanthemum isolates from Japan and China while a Japanese lisianthus isolate was separately clustered. CSNV is a member of the genus Tospovirus (Bunyaviridae) and was first reported on chrysanthemum in Brazil (1) and later in the Netherlands, Slovenia, United Kingdom, and Japan (3). Despite scattered recent reports of CSNV, the simultaneous production of chrysanthemum and lisianthus crops along the year by Brazilian farmers has contributed to the virus maintenance in the field. The high identity between Brazilian and Japanese isolates of CSNV suggest a possible reintroduction of the virus through exchange of vegetative propagating material. References: (1) L. M. L. Duarte et al. J. Phytopathol. 143:569, 1995. (2) M. Eiras et al. Fitopatol. Bras. 26:170, 2001. (3) K. Momonoi et al. J. Gen. Plant Pathol. 77:142, 2011.


Materials ◽  
2021 ◽  
Vol 14 (21) ◽  
pp. 6706
Author(s):  
Maria Tunkiewicz ◽  
Joanna Misiewicz ◽  
Pawel Sikora ◽  
Sang-Yeop Chung

This paper deals with the hygric characterization of early 20th century machine-made clay bricks, representative of great number of historical buildings in north-eastern Poland. Heritage buildings have a high potential for adaptive reuse, which is strictly connected with an urge for knowledge about the properties of these existing building envelopes. To better understand the hygric behavior of historic buildings, various experimental laboratory tests, including density, water absorption, compressive strength and freeze-thaw resistance, were conducted. In order to assess the microstructural characteristics of the tested bricks, mercury intrusion porosimetry (MIP) and X-ray micro-computed tomography (micro-CT) tests were performed. These tests were conducted on clay bricks from historic buildings, as well as on those that are currently being produced, in order to identify the relationship between the materials used in the past and the replacements produced presently. This paper addresses the lack of systematic application of existing standards for evaluating the state of the conservation of historic bricks and for establishing the specifications for replacement bricks. The results of conducted study and further research will be the basis for creating a historic materials database. It would be a useful tool for selecting bricks that correspond with the historically used materials and help to maintain homogenous structure of the restored buildings.


2017 ◽  
Vol 16 (1) ◽  
pp. 37
Author(s):  
Pétala Tuani Candido de Oliveira Salvador ◽  
Kisna Yasmin Andrade Alves ◽  
Cláudia Cristiane Filgueira Martins Rodrigues ◽  
Yole Matias Silveira de Assis ◽  
Lílian De Andrade Virgílio ◽  
...  

Aim:  to  reveal the  typical ideal  of  members  of  a  research  group in nursing regarding patient safety. Method: this is a descriptive study, using a qualitative approach  that  follows,  as  a  theoretical  reference,  the  comprehensive  approach  of  the Social Phenomenology. Data collection took place in March 2015, using the focal group technique. Nine members of a research group from a Public University in North Eastern Brazil participated. Data were analyzed from Schutz's comprehensive approach. Result: the  characterization  of  the  members  of  the  research  group  is  discussed  from  the reasons-to  consolidate  patient  safety;  the  reasons-why  patient  safety  is  not  yet consolidated  and  actions  in  the  world  and  in  everyday  life  in search  of  security. Conclusion: the members of the research group point out typical actions to consolidate patient   safety   resulting   from   multi-professional   teamwork   and effective   patient participation.


2016 ◽  
Vol 234 ◽  
pp. 147-158 ◽  
Author(s):  
Vincent Montade ◽  
Ivan Jeferson Sampaio Diogo ◽  
Laurent Bremond ◽  
Charly Favier ◽  
Itayguara Ribeiro da Costa ◽  
...  

Sign in / Sign up

Export Citation Format

Share Document