scholarly journals Ilarviruses of Prunus spp.: A Continued Concern for Fruit Trees

2012 ◽  
Vol 102 (12) ◽  
pp. 1108-1120 ◽  
Author(s):  
V. Pallas ◽  
F. Aparicio ◽  
M. C. Herranz ◽  
K. Amari ◽  
M. A. Sanchez-Pina ◽  
...  
Keyword(s):  
Mosaic Virus ◽  
Genome Organization ◽  
Alfalfa Mosaic Virus ◽  
Fruit Trees ◽  
Plant Viruses ◽  
International Committee ◽  
Economic Losses ◽  
Tobacco Streak Virus ◽  
Streak Virus ◽  
Prunus Spp

Prunus spp. are affected by a large number of viruses, causing significant economic losses through either direct or indirect damage, which results in reduced yield and fruit quality. Among these viruses, members of the genus Ilarvirus (isometric labile ringspot viruses) occupy a significant position due to their distribution worldwide. Although symptoms caused by these types of viruses were reported early in the last century, their molecular characterization was not achieved until the 1990s, much later than for other agronomically relevant viruses. This was mainly due to the characteristic liability of virus particles in tissue extracts. In addition, ilarviruses, together with Alfalfa mosaic virus, are unique among plant viruses in that they require a few molecules of the coat protein in the inoculum in order to be infectious, a phenomenon known as genome activation. Another factor that has made the study of this group of viruses difficult is that infectious clones have been obtained only for the type member of the genus, Tobacco streak virus. Four ilarviruses, Prunus necrotic ringspot virus, Prune dwarf virus, Apple mosaic virus, and American plum line pattern virus, are pathogens of the main cultivated fruit trees. As stated in the 9th Report of the International Committee on Taxonomy of Viruses, virions of this genus are “unpromising subjects for the raising of good antisera.” With the advent of molecular approaches for their detection and characterization, it has been possible to get a more precise view of their prevalence and genome organization. This review updates our knowledge on the incidence, genome organization and expression, genetic diversity, modes of transmission, and diagnosis, as well as control of this peculiar group of viruses affecting fruit trees.

scholarly journals Assessment of Common Soybean-Infecting Viruses in Ohio, USA, Through Multi-site Sampling and High-Throughput Sequencing

2016 ◽  
Vol 17 (2) ◽  
pp. 133-140 ◽  
Author(s):  
Junping Han ◽  
Leslie L. Domier ◽  
Bryan J. Cassone ◽  
Anne Dorrance ◽  
Feng Qu
Keyword(s):  
Mosaic Virus ◽  
High Throughput ◽  
High Throughput Sequencing ◽  
Virus Disease ◽  
Soybean Mosaic Virus ◽  
Alfalfa Mosaic Virus ◽  
Plant Viruses ◽  
Yellow Mosaic Virus ◽  
Tobacco Streak Virus ◽  
Streak Virus

Multi-site sampling was conducted during 2011 and 2012 to assess the scope of virus disease problems of soybean in Ohio, USA. A total of 259 samples were collected from 80 soybean fields distributed in 42 Ohio counties, accounting for more than 90% of major soybean-growing counties in Ohio. A high-throughput RNA-Seq approach was adopted to identify all viruses in the samples that share sufficient sequence similarities with known plant viruses. To minimize sequencing costs, total RNA extracted from up to 20 samples were first pooled to make up regional pools, resulting in eight regional pools per year in both 2011 and 2012. These regional pools were further pooled into two yearly master pools of RNA, and sequenced using the Illumina's HiSeq2000 platform. Bioinformatic analyses of sequence reads led to the identification of signature sequences of nine different viruses. The originating locations of these viruses were then mapped with PCR or RT-PCR. This study confirmed the widespread distribution of Bean pod mottle virus, Soybean vein necrosis virus, Tobacco ringspot virus, and Tobacco streak virus in Ohio. It additionally revealed occasional association of Alfalfa mosaic virus, Bean yellow mosaic virus, Clover yellow vein virus, Soybean mosaic virus, and Soybean Putnam virus with Ohio soybean. This is the first statewide survey of soybean viruses in Ohio, and provides the much-needed baseline information for management of virus diseases of soybean. Accepted for publication 20 May 2016. Published 10 June 2016.

scholarly journals Occurrence and Relative Incidence of Viruses Infecting Soybeans in Iran

Plant Disease ◽  
2004 ◽  
Vol 88 (10) ◽  
pp. 1069-1074 ◽  
Author(s):  
A. R. Golnaraghi ◽  
N. Shahraeen ◽  
R. Pourrahim ◽  
Sh. Farzadfar ◽  
A. Ghasemi
Keyword(s):  
Mosaic Virus ◽  
Soybean Mosaic Virus ◽  
Alfalfa Mosaic Virus ◽  
Soybean Seed ◽  
Ringspot Virus ◽  
Yellow Mosaic Virus ◽  
Tobacco Streak Virus ◽  
Enzyme Linked Immunosorbent Assay ◽  
Streak Virus ◽  
Natural Occurrence

A survey was conducted to determine the incidence of Alfalfa mosaic virus (AlMV), Bean common mosaic virus (BCMV), Bean yellow mosaic virus (BYMV), Blackeye cowpea mosaic virus (BlCMV), Cucumber mosaic virus (CMV), Pea enation mosaic virus (PEMV), Peanut mottle virus (PeMoV), Soybean mosaic virus (SMV), Tobacco mosaic virus (TMV), Tobacco ringspot virus (TRSV), Tobacco streak virus (TSV), Tomato ringspot virus (ToRSV), and Tomato spotted wilt virus (TSWV) on soybean (Glycine max) in Iran. Totals of 3,110 random and 1,225 symptomatic leaf samples were collected during the summers of 1999 and 2000 in five provinces of Iran, where commercial soybean is grown, and tested by enzyme-linked immunosorbent assay (ELISA) using specific polyclonal antibodies. Serological diagnoses were confirmed by electron microscopy and host range studies. The highest virus incidence among the surveyed provinces was recorded in Mazandaran (18.6%), followed by Golestan (15.7%), Khuzestan (14.2%), Ardabil (13.9%), and Lorestan (13.5%). Incidence of viruses in decreasing order was SMV (13.3%), TSWV (5.4%), TRSV (4.2%), TSV (4.1%), PEMV (2.9%), BYMV (2.2%), ToRSV (2.1%), AlMV (1.3%), BCMV (0.8%), and CMV (0.6%). Additionally, 1.5% of collected leaf samples had positive reactions in ELISA with antiserum to TMV, indicating the possible infection of soybeans in Iran with a Tobamovirus that is related serologically to TMV. Of 195 leaves from plants showing soybean pod set failure syndrome (PSF) in Mazandaran and Lorestan, only 14 (7.2%) samples had viral infection. No correlation was observed between PSF and presence of the 13 viruses tested, suggesting the involvement of other viruses or factors in this syndrome. To investigate the presence of seed-borne viruses, including SMV, TRSV, ToRSV, and TSV, 7,830 soybean seeds were collected randomly at harvesting time from the major sites of soybean seed production located in Mazandaran and Golestan provinces. According to ELISA analyses of germinated seedlings, 7.1 and 8.9% of the seed samples from Golestan and Mazandaran provinces, respectively, transmitted either SMV, TRSV, ToRSV, or TSV through seed. We also showed that SMV and other seed transmissible viruses, as well as TSWV, usually are the most prevalent viruses in soybean fields in Iran. In this survey, natural occurrence of AlMV, BCMV, BlCMV, BYMV, CMV, PEMV, PeMoV, and TSWV was reported for the first time on soybeans in Iran.

scholarly journals Fruit Distortion Mosaic Disease of Okra in India

Plant Disease ◽  
2003 ◽  
Vol 87 (11) ◽  
pp. 1395-1395 ◽  
Author(s):  
M. Krishnareddy ◽  
Salil Jalali ◽  
D. K. Samuel
Keyword(s):  
Electron Microscopy ◽  
Mosaic Virus ◽  
Tamil Nadu ◽  
Plant Viruses ◽  
Mosaic Disease ◽  
Tobacco Streak Virus ◽  
Enzyme Linked Immunosorbent Assay ◽  
Streak Virus ◽  
Field Samples ◽  
Local Lesions

Okra (Abelmoscus esculentus (L.) Moench) is an important vegetable crop of India and other subropical and tropical countries. In 2000 and 2001, in the states of Karnataka and Tamil Nadu, okra was severely affected by a new disease. Since that time, the disease has spread to other states: Andhra Pradesh, Madhya Pradesh, Haryana, and Maharashtra. Chlorotic spots, chlorotic leaf blotches, distortion of leaves, chlorotic streaking, distortion of fruits, and severe yield losses as much as 63% characterize the disease. The causal virus induces local and systemic chlorotic and necrotic lesions on Vigna unguiculata (L.) Walp. cv. C-152 and Chenopodium amaranticolor Coste & Reyne., chlorotic local lesions and mosaic on Cucumis sativus L., necrotic local lesions on Gossypium hirsutum L. and black gram (Vigna mungo L.), and chlorotic local lesions and systemic necrosis on sunflower (Helianthus annuus L.). Host reactions on these species are similar to those described for the ilarvirus Tobacco streak virus (TSV) (3). Electron microscopic observation of leafdip preparations from field samples and partially purified virus preparations revealed the presence of isometric virus particles measuring 25 to 30 nm in diameter. The virus was purified from mechanically inoculated okra by differential and sucrose density gradient centrifugation, and disease symptoms were reproduced in okra mechanically inoculated with the purified virus. In direct antigen coated enzyme-linked immunosorbent assay and immunosorbent electron microscopy tests, the purified virus and sap extracts reacted positively with polyclonal antibodies to TSV, the ilarvirus associated with sunflower necrosis and peanut stem necrosis diseases (1,2), but did not react positively to Turnip mosaic virus and Okra mosaic virus that are previously reported to infect okra. In reverse transcription-polymerase chain reaction (RT-PCR), using oligonucleotide primers designed to amplify the entire coat protein region of TSV, an approximately 800-bp DNA fragment was obtained from purified virus and okra displaying fruit distortion mosaic disease (OFDM) but not from healthy okra. On the basis of host range, serological relationship, electron microscopy, and RTPCR amplification, the virus causing OFDM is an ilarvirus closely related to TSV. To our knowledge, this is the first report of the occurrence of an ilarvirus in okra, and is the third and most recent report of an ilarvirus related to TSV causing disease in crops on the Indian subcontinent (1,2). References:(1). A. I. Bhat et al. Arch. Virol. 147:651, 2002. (2). A. S. Reddy et al. Plant Dis. 86:173, 2002. (3). S. W. Scott. Tobacco streak virus. No 381 in: Descriptions of Plant Viruses. CMI/AAB, Surrey, U.K., 2001.

scholarly journals First Report of Cucumber mosaic virus in Banana from Iran

Plant Disease ◽  
2005 ◽  
Vol 89 (8) ◽  
pp. 914-914 ◽  
Author(s):  
T. Ghotbi ◽  
K. Bananej
Keyword(s):  
Cucumber Mosaic Virus ◽  
Mosaic Virus ◽  
Plant Viruses ◽  
Economic Losses ◽  
Enzyme Linked Immunosorbent Assay ◽  
Streak Virus ◽  
Serological Tests ◽  
Tropical Fruit ◽  
Test Plants ◽  
Das Elisa

Banana bunchy top virus (BBTV), Banana streak virus (BSV), and Cucumber mosaic virus (CMV) (genus Cucumovirus, family Bromoviridae [2]) cause widespread economic losses on banana (Musa sp.) throughout the world and have been reported on banana in different countries including Pakistan along its southeastern border with Iran (1). A survey was conducted from 2004–2005 to identify viruses infecting banana in greenhouses in different growing areas in northern Iran, Mazandaran Province (Sari, Babol, Behshahr, and Ghaemshahr cities). A total of 180 samples from seven banana-growing greenhouses with symptoms of mosaic, chlorosis, stunting, and fruit malformation were collected. All samples were tested for CMV with polyclonal antibodies using double-antibody sandwich enzyme-linked immunosorbent assay (DAS-ELISA) (CMV strain D subgroup I; gifted by H. Lecoq, INRA, Avignion, France). For sap inoculation onto indicator test plants, selected ELISA-positive leaf samples were ground in chilled 0.01 M phosphate buffer, pH 7.0, containing 0.15% 2-mercaptoethanol. Chlorotic and necrotic local lesions developed on Chenopodium amaranticolor and Vigna unguiculata (cv. Mashad local) 10 and 12 days postinoculation, respectively. Cucumis sativus and Nicotiana rustica also developed systemic mosaic symptoms (3). All indicator test plants were rechecked for the presence of CMV using DAS-ELISA. On the basis of serological tests and indicator host plants reactions, CMV was identified in 32% of samples including Sari (13.8%), Babol (2.7%), Behshahr (10%) and Ghahemshahr (5%), respectively. Fifty-five samples did not react with CMV antiserum but the presence of symptoms resembling BBTV and BSV (4) emphasizes the need for further investigations to confirm the presence and identities of other viruses. References: (1) J. Bird and F. L. Wellman. Phytopathology 52:286, 1962. (2) S. K. Choi et al. J. Virol. Methods 83:67, 1999. (3) A. J. Gibbs and B. D. Harrison. Descriptions of Plant Viruses. No.1. CMI/AAB, Surrey, England, 1970. (4) R. C. Ploetz et al., eds. Compendium of Tropical Fruit Diseases. The American Phytopathological Society, St. Paul, MN, 1994.

scholarly journals First Report of Tobacco Streak Ilarvirus from Honeysuckle

Plant Disease ◽  
1998 ◽  
Vol 82 (12) ◽  
pp. 1402-1402 ◽  
Author(s):  
H. E. Waterworth
Keyword(s):  
Chenopodium Quinoa ◽  
Alfalfa Mosaic Virus ◽  
Plant Viruses ◽  
Tobacco Streak Virus ◽  
Enzyme Linked Immunosorbent Assay ◽  
Late Winter ◽  
Streak Virus ◽  
Local Lesions ◽  
Quarantine Station ◽  
Young Leaves

A honeysuckle (Lonicera fragrantissima) shrub on the grounds of the former Plant Quarantine Station, Glenn Dale, MD, had chlorotic leaves on some shoot tips and a mild veinal chlorosis. Young leaves were triturated in buffer and rub-inoculated onto a series of potential indicator hosts. The virus incited necrotic local lesions and necrosis of the growing point in Chenopodium quinoa, etched ringspots on inoculated leaves of Nicotiana tabacum Xanthi nc, mosaic in Zinnia violacea, and chlorotic local lesions in Tetragonia tetragonioides. It did not infect any of 46 other herbaceous genera in families Cucurbitaceae, Fabaceae, Asteraceae, Solanaceae, or Brassicaceae. In gel diffusion tests with symptomatic leaves from tobacco, this virus reacted with antiserum to tobacco streak virus (TSV) HR strain, but did not react with antisera to alfalfa mosaic or with antisera to 12 viruses in the NEPO or Sobemovirus groups. Virus in leaves directly from the source shrubs, tested by enzyme-linked immunosorbent assay (ELISA), also reacted with TSV strain HF antiserum. Examination by electron microscopy of leaf dips revealed isometric particles 27 nm in diameter. The now 12-ft tall shrubs were grown from seed imported from China in 1914 (PI 40689). This species is now widely commercially available in the U.S. and grown for its fragrant late winter flowers (2). Viral-infected Lonicera spp. have been reported from Europe, Russia, Japan, and Canada (1). TSV is reported to be seed-borne in several other genera. Among other viruses reported from honeysuckle are Lonicera latent carlavirus, tobacco leaf curl geminivirus, alfalfa mosaic virus, tomato bushy stunt virus, a rhabdovirus, and an aphid transmitted virus. References: (1) R. W. Fulton. CMI/AAB Descriptions of Plant Viruses No. 307, 1985. (2) C. J. Perkin. Plantsman 12:215, 1991.

scholarly journals Pathogenesis of Alfalfa mosaic virus in Soybean (Glycine max) and Expression of Chimeric Rabies Peptide in Virus-Infected Soybean Plants

2001 ◽  
Vol 91 (10) ◽  
pp. 941-947 ◽  
Author(s):  
Nina Fleysh ◽  
Deepali Deka ◽  
Maria Drath ◽  
Hilary Koprowski ◽  
Vidadi Yusibov
Keyword(s):  
Glycine Max ◽  
Mosaic Virus ◽  
Seed Coat ◽  
Alfalfa Mosaic Virus ◽  
Soybean Seed ◽  
Value Added ◽  
Plant Viruses ◽  
Tissue Samples ◽  
Seed Formation ◽  
Soybean Plants

Infection of soybean (Glycine max) plants inoculated with particles of Alfalfa mosaic virus (AlMV) isolate 425 at 12 days after germination was monitored throughout the life cycle of the plant (vegetative growth, flowering, seed formation, and seed maturation) by western blot analysis of tissue samples. At 8 to 10 days after inoculation, the upper uninoculated leaves showed symptoms of virus infection and accumulation of viral coat protein (CP). Virus CP was detectable in leaves, stem, roots, seedpods, and seed coat up to 45 days postinoculation (dpi), but only in the seedpod and seed coat at 65 dpi. No virus accumulation was detected in embryos and cotyledons at any time during infection, and no seed transmission of virus was observed. Soybean plants inoculated with recombinant AlMV passaged from upper uninoculated leaves of infected plants showed accumulation of full-length chimeric AlMV CP containing rabies antigen in systemically infected leaves and seed coat. These results suggest the potential usefulness of plants and plant viruses as vehicles for producing proteins of biomedical importance in a safe and inexpensive manner. Moreover, even the soybean seed coat, treated as waste tissue during conventional processing for oil and other products, may be utilized for the expression of value-added proteins.

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