scholarly journals Population Genetic Analysis Corroborates Dispersal of Fusarium oxysporum f. sp. radicis-lycopersici from Florida to Europe

1999 ◽  
Vol 89 (8) ◽  
pp. 623-630 ◽  
Author(s):  
U. Liane Rosewich ◽  
R. E. Pettway ◽  
Talma Katan ◽  
H. C. Kistler
Keyword(s):  
Fusarium Oxysporum ◽  
Gene Diversity ◽  
Population Subdivision ◽  
Founder Population ◽  
Palm Beach County ◽  
Population Genetic Analysis ◽  
Low Frequencies ◽  
The United Kingdom ◽  
Crown And Root Rot ◽  
Southern Florida

Fusarium oxysporum isolates from tomato plants displaying crown and root rot symptoms were collected in central and southern Florida and analyzed using vegetative compatibility grouping (VCG) and nuclear restriction fragment length polymorphism (RFLP) data. VCG 0094 of F. oxysporum f. sp. radicis-lycopersici, previously known only from northwestern Europe, was predominant among 387 isolates assessed. In addition, two newly described VCGs (0098 and 0099) were detected at low frequencies. Floridian VCG 0094 isolates displayed a continuum of compatibilities, which is in contrast to the three distinct subgroups previously identified among European VCG 0094 isolates. RFLP haplotypes were constructed using one repetitive and three low-copy probes. Population subdivision of VCG 0094 from various Floridian counties and from northwestern Europe (Belgium, the Netherlands, and the United Kingdom) was evaluated by analysis of molecular variance. A “natural” population structure was revealed, differentiating populations from the east and west coasts of Florida. In addition, isolates from Europe were statistically indistinguishable from the Palm Beach County, FL, population. Furthermore, gene diversity among Palm Beach County VCG 0094 isolates was more than five times greater than among European isolates. Results from both VCG and RFLP analyses strongly support the inference that the European VCG 0094 constitutes a founder population that resulted from intercontinental migration of a few isolates from Palm Beach County, FL.

scholarly journals Population genetic variation analysis of bitter gourd wilt caused by Fusarium oxysporum f. sp. momordicae in China using inter simple sequence repeats (ISSR) molecular markers

2021 ◽  
Author(s):  
Rui Zang ◽  
Ying Zhao ◽  
Kangdi Guo ◽  
Kunqi Hong ◽  
Huijun Xi ◽  
...  
Keyword(s):  
Genetic Variation ◽  
Genetic Differentiation ◽  
Fusarium Oxysporum ◽  
Diversity Index ◽  
Gene Diversity ◽  
Pcr Amplification ◽  
Bitter Gourd ◽  
Diseased Plant ◽  
Variation Analysis ◽  
Group I

AbstractBitter gourd wilt caused by Fusarium oxysporum f. sp. momordicae (FOM) is a devastating crop disease in China. A total of 173 isolates characteristic of typical Fusarium oxysporum with abundant microconidia and macroconidia on white or ruby colonies were obtained from diseased plant tissues. BLASTn analysis of the rDNA-ITS of the isolates showed 99% identity with F. oxysporum species. Among the tested isolates, three were infectious toward tower gourd and five were pathogenic to bottle gourd. However, all of the isolates were pathogenic to bitter gourd. For genetic differences analysis, 40 ISSR primers were screened and 11 primers were used for ISSR-PCR amplification. In total, 127 loci were detected, of which 76 were polymorphic at a rate of 59.84%. POPGENE analysis showed that Nei’s gene diversity index (H) and Shannon’s information index (I) were 0.09 and 0.15, respectively, which indicated that the genetic diversity of the 173 isolates was low. The coefficient of gene differentiation (Gst = 0.33 > 0.15) indicated that genetic differentiation was mainly among populations. The strength of gene flow (Nm = 1.01 > 1.0) was weak, indicating that the population differentiation caused by gene drift was blocked to some degree. The dendrogram based on ISSR markers showed that the nine geographical populations were clustered into two groups at the threshold of genetic similarity coefficient of 0.96. The Shandong and Henan populations were clustered into Group I, while the Guangdong, Hainan, Guangxi, Fujian, Jiangxi, and Hubei populations constituted Group II. Results of the genetic variation analysis showed that the Hunan and Guangxi populations had the highest degree of genetic differentiation, while the Hubei population had the lowest genetic differentiation. Our findings enrich the knowledge of the genetic variation characteristics of FOM populations with the goal of developing effective disease-management programs and resistance breeding programs.

Fusarium oxysporum f. sp. radicis-lycopersici. [Descriptions of Fungi and Bacteria].

1996 ◽  
Author(s):  
D. Brayford
Keyword(s):  
Fusarium Oxysporum ◽  
Geographical Distribution ◽  
Spinacia Oleracea ◽  
Solanum Melongena ◽  
Capsicum Frutescens ◽  
Tomato Plants ◽  
Arachis Hypogea ◽  
Planting Material ◽  
Fungus Gnats ◽  
Crown And Root Rot

Abstract A description is provided for Fusarium oxysporum f. sp. radicis-lycopersici. Information is included on the disease caused by the organism, its transmission, geographical distribution, and hosts. HOSTS: Lycopersicon spp., including L. esculentum Mill. (tomato). Plants from several families may also be susceptible to some strains, in particular Capsicum frutescens L., Solanum melongena L. (Solanaceae), Arachis hypogea L., Astragalus glycyphyllos L., Glycine max (L.) Merr., Phaseolus vulgaris L., Pisum sativum L., Trifolium spp., Vicia faba L., (Leguminosae), Cucumis spp. (Cucurbitaceae), Beta vulgaris L. and Spinacia oleracea L. (Chenopodiaceae) (Jarvis & Shoemaker, 1978; 69, 7094; 73, 7659). DISEASE: Crown and root rot. GEOGRAPHICAL DISTRIBUTION: Australia, Belgium, Canada, Crete, France, Germany, Greece, Israel, Italy, Japan, Mexico, Spain, Sweden, The Netherlands, UK, USA. TRANSMISSION: Long range dissemination is via contaminated seed (73, 5786), diseased planting material (70, 1472) and by movement of infected soil/compost (64, 2160). Locally, conidia are readily spread by water flow, e.g. in irrigation or hydroponic systems (71, 4871, 4872, 6378). Some airborne dispersal of microconidia has been detected in glasshouses (Rowe et al., 1977), presumably resulting from splash droplet formation following sporulation on nearby plant debris. Fungus gnats have been reported to transport the fungus (73, 5534).

Control of Fusarium Crown and Root Rot of Tomato, Caused by Fusarium oxysporum f. sp. radicis-lycopersici, by Grafting onto Resistant Rootstocks

2006 ◽  
Vol 5 (2) ◽  
pp. 161-165 ◽  
Author(s):  
Khaled Hibar ◽  
Mejda Daami-Remadi . ◽  
Hayfa Jabnoun-Khiare . ◽  
Mohamed El Mahjoub .
Keyword(s):  
Fusarium Oxysporum ◽  
Root Rot ◽  
Crown And Root Rot ◽  
Grafting Onto

scholarly journals Genetic Divergence and Diversity in Himalayan Puccinia striiformis Populations from Bhutan, Nepal, and Pakistan

2019 ◽  
Vol 109 (10) ◽  
pp. 1793-1800 ◽  
Author(s):  
Muhammad Rameez Khan ◽  
Zia-ur Rehman ◽  
Sidra Noreen Nazir ◽  
Sangay Tshewang ◽  
Suraj Baidya ◽  
...  
Keyword(s):  
Puccinia Striiformis ◽  
Gene Diversity ◽  
Genotypic Diversity ◽  
Himalayan Region ◽  
Population Subdivision ◽  
Aerial Dispersal ◽  
Western Himalayan Region ◽  
Nonsignificant Difference ◽  
Limited Gene Flow ◽  
High Level

The western Himalayan region in Pakistan has been shown to be the center of diversity of Puccinia striiformis; however, little is known about its genetic relations with the eastern part of the Himalayas. We studied the genetic structure of P. striiformis from Nepal (35 isolates) and Bhutan (31 isolates) in comparison with 81 Pakistani samples collected during 2015 and 2016, through microsatellite genotyping. Genetic analyses revealed a recombinant and highly diverse population structure in Pakistan, Bhutan, and Nepal. A high level of genotypic diversity (>0.90) was observed for the three countries of Pakistan (0.96), Bhutan (0.96), and Nepal (0.91) with the detection of 108 distinct multilocus genotypes (MLGs) in the overall population; 59 for Pakistan, 27 for Bhutan, and 26 for Nepal. Mean number of alleles per locus and gene diversity were higher in Nepal (3.19 and 0.458, respectively) than Bhutan (3.12 and 0.458, respectively). A nonsignificant difference between the observed and the expected heterozygosity in all populations further confirmed the recombinant structure. A clear population subdivision between the Himalayan region of Nepal, Bhutan, and Pakistan was evident, as revealed by FST values (ranging between 0.111 to 0.198), discriminant analysis of principal components, and resampling of MLGs. Limited gene flow could be present between Nepal and Bhutan, while the population from Pakistan was clearly distinct, and no divergence was present between two populations from Pakistan (Bajaur and Malakand). The overall high diversity and recombination signature suggested the potential role of recombination in the eastern Himalayan region (Nepal and Bhutan), which needs to be considered during host resistance deployment and in the context of aerial dispersal of the pathogen. Further surveillance should be made in the Himalayan region for disease management in the region and in the context of worldwide invasions. [Formula: see text] Copyright © 2019 The Author(s). This is an open access article distributed under the CC BY 4.0 International license .

scholarly journals Identification of a new molecular marker C2-25 linked to the Fusarium oxysporum f.sp. radicis-lycopersici resistance Frl gene in tomato

2014 ◽  
Vol 50 (No. 4) ◽  
pp. 285-287 ◽  
Author(s):  
M. Staniaszek ◽  
W. Szczechura ◽  
W. Marczewski
Keyword(s):  
Fusarium Oxysporum ◽  
Dominant Gene ◽  
Hybrid Seed Production ◽  
Caps Marker ◽  
Solanum Lycopersicum L ◽  
Breeding Programmes ◽  
Tomato Breeding ◽  
Crown And Root Rot ◽  
Rot Disease ◽  
Conserved Ortholog Set

Fusarium oxysporum Schlecht. f.sp. radicis-lycopersici Jarvis & Schoemaker (FORL) is a saprophytic fungus, responsible for the fusarium crown and root rot disease in tomato (Solanum lycopersicum L.). This is one of the most destructive pathogens of this species. A new cleaved amplified polymorphic sequence (CAPS) marker C2-25 was developed for the detection of the dominant gene Frl, which confers tomato resistance to FORL. C2-25 was amplified from a conserved ortholog set II (COSII) sequence C2_At2g38025. The XapI-derived restriction product of 700 bp was informative for the identification of FORL resistant tomato genotypes and can be used as a diagnostic marker in tomato breeding programmes and hybrid seed production.

scholarly journals Role of the Shrub Tamarix nilotica in Dissemination of Fusarium oxysporum f. sp. radicis-lycopersici

Plant Disease ◽  
2001 ◽  
Vol 85 (7) ◽  
pp. 735-739 ◽  
Author(s):  
Y. Rekah ◽  
D. Shtienberg ◽  
J. Katan
Keyword(s):  
Fusarium Oxysporum ◽  
Root Rot ◽  
Selective Medium ◽  
Sampling Location ◽  
Susceptible Host ◽  
Growing Seasons ◽  
Tomato Field ◽  
Crown And Root Rot ◽  
Pathogen Populations

The saltcedar shrub Tamarix nilotica grows as a weed in the Arava region of Israel. This weed is commonly found in cultivated fields naturally infested with Fusarium oxysporum f. sp. radicis-lycopersici, the causal agent of tomato crown and root rot. Young bushes, 20 to 40 cm tall, were randomly uprooted from different fields. The roots were cut into segments which were placed on Fusarium-selective medium. Although the plants did not show any symptoms of disease, the roots of the shrub were colonized by the pathogen. The incidence of infected saltcedar plants and level of root colonization by F. oxysporum f. sp. radicis-lycopersici decreased with increasing distance of the sampling location from a tomato field infected with crown and root rot. F. oxysporum f. sp. radicis-lycopersici was also isolated from chaff of inflorescence samples taken from mature T. nilotica shrubs. Identity of the pathogen isolates obtained from T. nilotica roots and chaff samples was verified by pathogenicity and vegetative compatibility tests. Roots of T. nilotica plants sown under greenhouse conditions in soil naturally infested with F. oxysporum f. sp. radicis-lycopersici became colonized by the pathogen. Uprooting and removing saltcedar plants throughout the season from fields not cultivated with tomatoes lowered the inoculum density of F. oxysporum f. sp. radicis-lycopersici in the soil from 611 to 6 and from 176 to 10 CFU/g of soil in the 1998-99 and 1999-2000 growing seasons, respectively. These results demonstrate that T. nilotica may contribute to the buildup of the pathogen populations in the absence of a susceptible host. Colonization of saltcedar by F. oxysporum f. sp. radicis-lycopersici is an additional mechanism for survival of this pathogen in the fields and for dissemination through the spread of infested seed or chaff of T. nilotica.

scholarly journals FoSTUA, Encoding a Basic Helix-Loop-Helix Protein, Differentially Regulates Development of Three Kinds of Asexual Spores, Macroconidia, Microconidia, and Chlamydospores, in the Fungal Plant Pathogen Fusarium oxysporum

2004 ◽  
Vol 3 (6) ◽  
pp. 1412-1422 ◽  
Author(s):  
Toshiaki Ohara ◽  
Takashi Tsuge
Keyword(s):  
Fusarium Oxysporum ◽  
Fluorescent Protein ◽  
Negative Regulator ◽  
Vascular Wilt ◽  
Wild Type ◽  
Low Frequencies ◽  
Basic Helix Loop Helix ◽  
Helix Loop Helix ◽  
Chlamydospore Formation ◽  
Green Fluorescent

ABSTRACT The soil-borne fungus Fusarium oxysporum causes vascular wilt of a wide variety of plant species. F. oxysporum produces three kinds of asexual spores, macroconidia, microconidia, and chlamydospores. Falcate macroconidia are formed generally from terminal phialides on conidiophores and rarely from intercalary phialides on hyphae. Ellipsoidal microconidia are formed from intercalary phialides on hyphae. Globose chlamydospores with thick walls are developed by the modification of hyphal and conidial cells. Here we describe FoSTUA of F. oxysporum, which differentially regulates the development of macroconidia, microconidia, and chlamydospores. FoSTUA encodes a basic helix-loop-helix protein with similarity to Aspergillus nidulans StuA, which has been identified as a transcriptional regulator controlling conidiation. Nuclear localization of FoStuA was verified by using strains expressing FoStuA-green fluorescent protein fusions. The FoSTUA-targeted mutants exhibited normal microconidium formation in cultures. However, the mutants lacked conidiophores and produced macroconidia at low frequencies only from intercalary phialides. Thus, FoSTUA appears to be necessary to induce conidiophore differentiation. In contrast, chlamydospore formation was dramatically promoted in the mutants. These data demonstrate that FoStuA is a positive regulator and a negative regulator for the development of macroconidia and chlamydospores, respectively, and is dispensable for microconidium formation in cultures. The disease-causing ability of F. oxysporum was not affected by mutations in FoSTUA. However, the mutants produced markedly fewer macroconidia and microconidia in infected plants than the wild type. These results suggest that FoSTUA also has an important role for microconidium formation specifically in infected plants.

scholarly journals Fusarium Oxysporum F. Sp. Radicis-Lycopersici – the Cause of Fusarium Crown and Root Rot in Tomato Cultivation

2013 ◽  
Vol 53 (2) ◽  
pp. 172-176 ◽  
Author(s):  
Wojciech Szczechura ◽  
Mirosława Staniaszek ◽  
Hanna Habdas
Keyword(s):  
Fusarium Oxysporum ◽  
Fruit Quality ◽  
Root Rot ◽  
Dominant Gene ◽  
Chromosome 9 ◽  
Single Dominant Gene ◽  
Specific Enzyme ◽  
Vegetative Compatibility Groups ◽  
Field Crops ◽  
Crown And Root Rot

Abstract Fusarium oxysporum f. sp. radicis-lycopersici (FORL) leading to fusarium crown and root rot is one of the most destructive soilborne diseases of tomatoes occurring in greenhouse and field crops. Physiological races of FORL were not defined but nine vegetative compatibility groups (VGCs) were identified. Infection followed by wounds and natural holes and infection is not systemic. The optimum soil temperature for pathogen development is 18°C. Infection may cause plants to wilt and die completely or infection may lower fruit quality. Fusarium oxysporum f. sp. radicis-lycopersici has the ability to produce a specific enzyme, tomatinase, which breaks down α-tomatine and protects the pathogen. In contrast tomato also has a defence system which consists of the enzymes chitinase and β-1, 3-glucanase. Tomato resistance to Fusarium oxysporum f. sp. radicis-lycopersici is determined by a single dominant gene Frl, localized on the long arm of chromosome 9. It was introduced to cultivars from Licopersicum peruvianum (L.) Mill.

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