scholarly journals A Sardinian founder mutation in GP1BB that impacts thrombocytopenia

Author(s):  
Fabio Busonero ◽  
Maristella Steri ◽  
Valeria Orrù ◽  
Gabriella Sole ◽  
Stefania Olla ◽  
...  

AbstractTo investigate the genetic regulation of platelet (PLT) levels we carried out a whole-genome association analysis in 6,528 Sardinians from the general population of the Lanusei valley. We found 6 variants significantly influencing PLT levels, including a novel rare missense mutation (p.Pro27Ser) in the GP1BB protein that is associated with PLT reduction (P=1.17×10−16). This mutation is rare in the SardiNIA population cohort (frequency of 0.45%), even rarer in the rest of the Sardinian island (frequency of 0.16%), and not reported elsewhere. Notably, GP1BB is involved in Bernard-Soulier syndrome (BSS), a rare autosomal recessive bleeding disorder caused by a defect in the platelet GPIb-IX-V protein complex. Consistently, the 57 identified individuals heterozygous for the p.P27S mutation showed mild thrombocytopenia, morphologically enlarged platelets (P=2.13×10−10), and reduced expression of two GPIb-IX-V-complex components: GPIbα (−26.51%, P=3.66×10−8) and GPIX (−24.69%, P=2.66×10−6). Molecular modeling infers a corresponding reduction in the stability of GP1BB. These observations predict that in homozygosity as well as in individuals carrying specific compound heterozygous configurations, this variant likely causes BSS.

2012 ◽  
Vol 44 (10) ◽  
pp. 1166-1170 ◽  
Author(s):  
Gulnara R Svishcheva ◽  
Tatiana I Axenovich ◽  
Nadezhda M Belonogova ◽  
Cornelia M van Duijn ◽  
Yurii S Aulchenko

BMC Genetics ◽  
2017 ◽  
Vol 18 (1) ◽  
Author(s):  
Lucas L. Verardo ◽  
Marja-Liisa Sevón-Aimonen ◽  
Timo Serenius ◽  
Ville Hietakangas ◽  
Pekka Uimari

2009 ◽  
Vol 91 (6) ◽  
pp. 367-371 ◽  
Author(s):  
B. J. HAYES ◽  
I. M. MACLEOD ◽  
M. BARANSKI

SummaryA number of farmed species are characterized by breeding populations of large full-sib families, including aquaculture species and outcrossing plant species. Whole genome association studies in such species must account for stratification arising from the full-sib family structure to avoid high rates of false discovery. Here, we demonstrate the value of selective genotyping strategies which balance the contribution of families across high and low phenotypes to greatly reduce rates of false discovery with a minimal effect on power.


2011 ◽  
Vol 89 (4) ◽  
pp. 988-995 ◽  
Author(s):  
S. K. Onteru ◽  
B. Fan ◽  
M. T. Nikkilä ◽  
D. J. Garrick ◽  
K. J. Stalder ◽  
...  

PLoS Genetics ◽  
2008 ◽  
Vol 4 (6) ◽  
pp. e1000109 ◽  
Author(s):  
Ke Hao ◽  
Eric E. Schadt ◽  
John D. Storey

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