scholarly journals Chiral crystallization of a zinc(II) complex

2021 ◽  
Vol 77 (5) ◽  
pp. 542-546
Author(s):  
Shabana Noor ◽  
Shintaro Suda ◽  
Tomoyuki Haraguchi ◽  
Fehmeeda Khatoon ◽  
Takashiro Akitsu
Keyword(s):  
Hydrogen Bond ◽  
Schiff Base ◽  
Complex Molecule ◽  
Solvent Molecule ◽  
Hirshfeld Surface ◽  
Supramolecular Interactions ◽  
Orthorhombic Space Group ◽  
Complex Molecules ◽  
Trigonal Bipyramidal ◽  
Distorted Trigonal Bipyramidal

The compound, {6,6′-dimethoxy-2,2′-[(4-azaheptane-1,7-diyl)bis(nitrilomethanylidyne)]diphenolato}zinc(II) methanol monosolvate, [Zn(C22H27N3O4)]·CH3OH, at 298 K crystallizes in the orthorhombic space group Pna21. The Zn atom is coordinated by a pentadentate Schiff base ligand in a distorted trigonal–bipyramidal N3O2 geometry. The equatorial plane is formed by the two phenolic O and one amine N atom. The axial positions are occupied by two amine N atoms. The distorted bipyramidal geometry is also supported by the trigonality index (τ), which is found to be 0.85 for the molecule. In the crystal, methanol solvent molecule is connected to the complex molecule by an O—H...O hydrogen bond and the complex molecules are connected by weak supramolecular interactions, so achiral molecules generate a chiral crystal. The Hirshfeld surface analysis suggests that H...H contacts account for the largest percentage of all interactions.

scholarly journals Crystal structure of {6,6′-dihydroxy-2,2′-[iminobis(propane-1,3-diylnitrilomethanylylidene)]diphenolato-κ5O1,N,N′,N′′,O1′}copper(II)

2015 ◽  
Vol 71 (11) ◽  
pp. m203-m204
Author(s):  
Shabana Noor ◽  
Sarvendra Kumar ◽  
Suhail Sabir ◽  
Rüdiger W. Seidel ◽  
Richard Goddard
Keyword(s):  
Crystal Structure ◽  
Hydrogen Bond ◽  
Schiff Base ◽  
Hydrogen Bonds ◽  
Asymmetric Unit ◽  
Bond Forming ◽  
Trigonal Bipyramidal ◽  
Column Structure ◽  
Independent Molecules ◽  
Distorted Trigonal Bipyramidal

The title compound, [Cu(C20H23N3O4)], crystallizes in the space groupCcwith two independent molecules in the asymmetric unit. The CuIIatoms are each coordinated by the pentadentate Schiff base ligand in a distorted trigonal bipyramidal N3O2geometry. The equatorial plane is formed by the two phenolic O atoms and the amine N atom, while the axial positions are occupied by the two imine N atoms. In the crystal, the two independent molecules are each connected into a column along thebaxis through intermolecular O—H...O hydrogen bonds. The two independent columns are further linked through an N—H...O hydrogen bond, forming a double-column structure.

scholarly journals Crystal structure of the mixed methanol and ethanol solvate of bis{3,4,5-trimethoxy-N′-[1-(pyridin-2-yl)ethylidene]benzohydrazidato}zinc(II)

2020 ◽  
Vol 76 (3) ◽  
pp. 303-308
Author(s):  
Kateryna Znovjyak ◽  
Igor O. Fritsky ◽  
Tatiana Y. Sliva ◽  
Vladimir M. Amirkhanov ◽  
Maksym Seredyuk
Keyword(s):  
Crystal Structure ◽  
Title Compound ◽  
Crystal Packing ◽  
Complex Molecule ◽  
Solvent Molecule ◽  
Hirshfeld Surface ◽  
Two Dimensional ◽  
Complex Molecules ◽  
Ethanol Solvate ◽  
Pyridine Group

The unit cell of the title compound, [Zn(C17H18N3O4)2]·CH4O·C2H6O, contains two complex molecules related by an inversion centre, plus one methanol and one ethanol solvent molecule per complex molecule. In each complex, two deprotonated pyridine aroylhydrazone ligands {3,4,5-trimethoxy-N′-[1-(pyridin-2-yl)ethylidene]benzohydrazide} coordinate to the ZnII ion through the N atoms of the pyridine group and the ketamine, and, additionally, through the O atom of the enolate group. In the crystal, dimers are formed by π–π interactions between the planar ligand moieties, which are further connected by C...O and C...C interactions. The intermolecular interactions were investigated using Hirshfeld surface analysis and two-dimensional fingerprint plots, revealing that the most important contributions for the crystal packing are from H...H (44.8%), H...C/C...H (22.2%), H...O/O...H (18.7%) and C...C (3.9%) interactions.

Dimethyl(2-oxido-1-naphthaldehydeisonicotinoylhydrazonato)tin(IV) methanol solvate

2006 ◽  
Vol 62 (4) ◽  
pp. m836-m837
Author(s):  
Shao-Wen Chen ◽  
Han-Dong Yin ◽  
Da-Qi Wang
Keyword(s):  
Molecular Structure ◽  
Complex Molecule ◽  
Solvent Molecule ◽  
Title Complex ◽  
Trigonal Bipyramidal ◽  
Distorted Trigonal Bipyramidal ◽  
Hydrogen Bonded

In the molecular structure of the title complex, [Sn(CH3)2(C17H11N3O2)]·CH3OH, the Sn atom is in a distorted trigonal–bipyramidal coodination, with Sn—O distances of 2.099 (6) and 2.128 (6) Å. A methanol solvent molecule is O—H...N hydrogen bonded to the complex molecule.

scholarly journals Crystal structure and Hirshfeld surface analysis of aquabis(nicotinamide-κN1)bis(2,4,6-trimethylbenzoato-κO)zinc

2017 ◽  
Vol 73 (9) ◽  
pp. 1348-1352 ◽  
Author(s):  
Tuncer Hökelek ◽  
Gülçin Şefiye Aşkın ◽  
Safiye Özkaya ◽  
Hacali Necefoğlu
Keyword(s):  
Crystal Structure ◽  
Surface Analysis ◽  
Crystal Packing ◽  
Rotation Axis ◽  
Complex Molecule ◽  
Hirshfeld Surface ◽  
Hirshfeld Surface Analysis ◽  
Trigonal Bipyramidal ◽  
Distorted Trigonal Bipyramidal Coordination ◽  
Distorted Trigonal Bipyramidal

The asymmetric unit of the title complex, [Zn(C10H11O2)2(C6H6N2O)2(H2O)], contains one half of the complex molecule, and the ZnIIcation and the water O atom lie on a twofold rotation axis. The ZnIIcation is coordinated by two carboxylate O atoms of the two symmetry-related 2,4,6-trimethylbenzoate (TMB) anions and by the water O atom at distances of 2.0311 (16) and 2.076 (2) Å to form a slightly distorted trigonal–planar arrangement, while the distorted trigonal–bipyramidal coordination sphere is completed by the two pyridine N atoms of the two symmetry-related monodentate nicotinamide (NA) ligands at distances of 2.2066 (19) Å in the axial positions. In the crystal, molecules are linkedviaintermolecular N—H...O and O—H...O hydrogen bonds withR22(12),R33(10) andR33(16) ring motifs, forming a double-column structure running along thec-axis direction. The Hirshfeld surface analysis of the crystal structure indicates that the most important contributions for the crystal packing are from H...H (58.4%), H...C/C...H (20.3%) and H...O/O...H (18.3%) interactions.

scholarly journals μ2-Chlorido-chlorido(μ2-4-{[2-(diethylamino)ethyl]imino}pent-2-en-2-olato)bis(tetrahydrofuran-κO)cobalt(II)lithium

IUCrData ◽  
2018 ◽  
Vol 3 (11) ◽  
Author(s):  
Felipe A. Vinocour ◽  
Andrea Soto-Navarro ◽  
Leslie W. Pineda
Keyword(s):  
Coordination Sphere ◽  
Complex Molecule ◽  
Three Dimensional ◽  
Asymmetric Unit ◽  
Monoclinic Symmetry ◽  
Complex Molecules ◽  
Trigonal Bipyramidal ◽  
Dimensional Network ◽  
Distorted Trigonal Bipyramidal Coordination ◽  
Distorted Trigonal Bipyramidal

The crystal structure of the title compound, [CoLi(C11H21N2O)Cl2(C4H8O)2], has monoclinic symmetry and comprises one heterometallic binuclear complex molecule in the asymmetric unit. The Co2+ cation is bonded to one oxygen and two nitrogen atoms of a β-ketoiminato ligand and to two chlorido ligands, leading to a distorted trigonal-bipyramidal coordination sphere. One of the Cl ligands and the oxygen atom of the β-ketoiminato ligand are bridging to a Li+ cation, which is further bonded to oxygen atoms of two THF molecules. The resulting coordination sphere is distorted tetrahedral. In the crystal, weak intermolecular C—H...Cl hydrogen bonds are identified that link the complex molecules into a three-dimensional network structure.

scholarly journals Crystal structure of aquachloridobis(2-ethoxy-6-formylphenolato-κ2O1,O6)iron(III) acetonitrile hemisolvate

2014 ◽  
Vol 70 (11) ◽  
pp. 269-271
Author(s):  
Xi-Fu Jiang ◽  
Ru-Xia Zhao ◽  
Shu-Hua Zhang
Keyword(s):  
Crystal Structure ◽  
Hydrogen Bond ◽  
Hydrogen Bonds ◽  
Complex Molecule ◽  
Solvent Molecule ◽  
Asymmetric Unit ◽  
Complex Molecules ◽  
Coordination Environment ◽  
Independent Molecules ◽  
Cl Atom

In the title compound, [Fe(L)2Cl(H2O)]·0.5CH3CN, (HLis 3-ethoxy-2-hydroxy-benzaldehyde, C9H10O3), there are two independent complex molecules and one acetonitrile solvent molecule in the asymmetric unit. In each complex molecule, the FeIIIion has a distorted O5Cl octahedral coordination environment defined by two bidentate 2-ethoxy-6-formylphenolato ligands, one Cl atom and one water molecule. In the crystal, O—H...O hydrogen bonds link the two independent molecules to form a dimer. The solvent molecule is linked to the complex molecule by a weak C—H...O hydrogen bond. Further weak C—H...O interactions along with weak C—H...Cl hydrogen bonds link the components into chains parallel to [001].

scholarly journals The crystal and molecular structure of the bis(N,N,N′,N′-tetramethylethanediamine) adduct of I(Br)InInBr2, In2Br3I•2C6H16N2, an indium–indium bonded molecule

1984 ◽  
Vol 62 (3) ◽  
pp. 601-605 ◽  
Author(s):  
Masood A. Khan ◽  
Clovis Peppe ◽  
Dennis G. Tuck
Keyword(s):  
Molecular Structure ◽  
Crystal Structure ◽  
Crystal And Molecular Structure ◽  
Heavy Atom ◽  
Orthorhombic Space Group ◽  
Trigonal Bipyramidal ◽  
Cell Dimensions ◽  
Unit Cell Dimensions ◽  
Heavy Atom Method ◽  
Distorted Trigonal Bipyramidal

The crystal structure of the title compound has been determined by the heavy atom method. The crystals are orthorhombic, space group Pbca, with unit cell dimensions a = 22.795(3) Å, b = 17.518(2) Å, c = 12.396(3) Å, Z = 8; R = 0.0409 for 1527 unique "observed" reflections. The structure is disordered, with each halogen site (X) occupied by 75% Br, 25% I. The molecule consists of two X2(tmen)In units (tmen = N,N,N′,N′-tetramethylethanediamine) with distorted trigonal bipyramidal geometry, joined by an In—In bond 2.775(2) Å in length.

scholarly journals Structure of a dinuclear cadmium complex with 2,2′-bipyridine, monodentate nitrate and 3-carboxy-6-methylpyridine-2-carboxylate ligands: intramolecular carbonyl(lone pair)...π(ring) and nitrate(π)...π(ring) interactions

2015 ◽  
Vol 71 (8) ◽  
pp. 890-894
Author(s):  
Juan Granifo ◽  
Sebastián Suarez ◽  
Ricardo Baggio
Keyword(s):  
Complex Molecule ◽  
Solvent Molecule ◽  
Lone Pair ◽  
Dinuclear Complex ◽  
Cadmium Complex ◽  
Nitrate Anion ◽  
Coordination Geometry ◽  
Complex Molecules ◽  
Carboxylate Ligands ◽  
Solvent Molecules

The centrosymmetric dinuclear complex bis(μ-3-carboxy-6-methylpyridine-2-carboxylato)-κ3N,O2:O2;κ3O2:N,O2-bis[(2,2′-bipyridine-κ2N,N′)(nitrato-κO)cadmium] methanol monosolvate, [Cd2(C8H6NO4)2(NO3)2(C10H8N2)2]·CH3OH, was isolated as colourless crystals from the reaction of Cd(NO3)2·4H2O, 6-methylpyridine-2,3-dicarboxylic acid (mepydcH2) and 2,2′-bipyridine in methanol. The asymmetric unit consists of a CdIIcation bound to a μ-κ3N,O2:O2-mepydcH−anion, anN,N′-bidentate 2,2′-bipyridine group and anO-monodentate nitrate anion, and is completed with a methanol solvent molecule at half-occupancy. The Cd complex unit is linked to its centrosymmetric image through a bridging mepydcH−carboxylate O atom to complete the dinuclear complex molecule. Despite a significant variation in the coordination angles, indicating a considerable departure from octahedral coordination geometry about the CdIIatom, the Cd—O and Cd—N distances in this complex are surprisingly similar. The crystal structure consists of O—H...O hydrogen-bonded chains parallel toa, further bound by C—H...O contacts alongbto form planar two-dimensional arrays parallel to (001). The juxtaposed planes form interstitial columnar voids that are filled by the methanol solvent molecules. These in turn interact with the complex molecules to further stabilize the structure. A search in the literature showed that complexes with the mepydcH−ligand are rare and complexes reported previously with this ligand do not adopt the μ-κ3coordination mode found in the title compound.

scholarly journals 2-Oxo-2H-chromen-7-yl 4-methylbenzoate

IUCrData ◽  
2018 ◽  
Vol 3 (7) ◽  
Author(s):  
Abdoulaye Djandé ◽  
Akoun Abou ◽  
Félix Kini ◽  
Konan René Kambo ◽  
Michel Giorgi
Keyword(s):  
Hydrogen Bond ◽  
Title Compound ◽  
Acute Angle ◽  
Membered Ring ◽  
Hirshfeld Surface ◽  
Supramolecular Interactions ◽  
Stacking Interactions ◽  
Weak Hydrogen Bond ◽  
Compound C ◽  
Benzene Rings

In the title compound, C17H12O4, the benzoate ring is oriented at an acute angle of 60.14 (13)° relative to the coumarin plane (r.m.s. deviation = 0.006 Å). This conformation is stabilized by an intramolecular C—H...O weak hydrogen bond, which forms a five-membered ring. Also present are π–π stacking interactions between neighbouring pyrone and benzene rings [centroid-to-centroid distances in the range 3.6286 (1)–3.6459 (1) Å] and C=O...π interactions [O...centroid distances in the range 3.2938 (1)–3.6132 (1) Å]. Hirshfeld surface analysis has been used to confirm and quantify the supramolecular interactions.

Hirshfeld surface analysis of two new phosphorothioic triamide structures

2015 ◽  
Vol 71 (9) ◽  
pp. 824-833 ◽  
Author(s):  
Amir Hossein Alamdar ◽  
Mehrdad Pourayoubi ◽  
Anahid Saneei ◽  
Michal Dušek ◽  
Monika Kučeráková ◽  
...  
Keyword(s):  
Hydrogen Bond ◽  
Hydrogen Bonds ◽  
Solvent Molecule ◽  
Hirshfeld Surface ◽  
Two Dimensional ◽  
Asymmetric Unit ◽  
Hydrogen Bond Donor ◽  
Hydrogen Bond Acceptor ◽  
Double Hydrogen ◽  
Negligible Contribution

Hirshfeld surfaces and two-dimensional fingerprint plots are used to analyse the intermolecular interactions in two new phosphorothioic triamide structures, namelyN,N′,N′′-tris(3,4-dimethylphenyl)phosphorothioic triamide acetonitrile hemisolvate, P(S)[NHC6H3-3,4-(CH3)2]3·0.5CH3CN or C24H30N3PS·0.5CH3CN, (I), andN,N′,N′′-tris(4-methylphenyl)phosphorothioic triamide–3-methylpiperidinium chloride (1/1), P(S)[NHC6H4(4-CH3)]3·[3-CH3-C5H9NH2]+·Cl−or C21H24N3PS·C6H14N+·Cl−, (II). The asymmetric unit of (I) consists of two independent phosphorothioic triamide molecules and one acetonitrile solvent molecule, whereas for (II), the asymmetric unit is composed of three components (molecule, cation and anion). In the structure of (I), the different components are organized into a six-molecule aggregate through N—H...S and N—H...N hydrogen bonds. The components of (II) are aggregated into a two-dimensional array through N—H...S and N—H...Cl hydrogen bonds. Moreover, interesting features of packing arise in this structure due to the presence of a double hydrogen-bond acceptor (the S atom of the phosphorothioic triamide molecule) and of a double hydrogen-bond donor (the N—H unit of the cation). For both (I) and (II), the full fingerprint plot of each component is asymmetric as a consequence of the presence of three fragments. These analyses reveal that H...H interactions [67.7 and 64.3% for the two symmetry-independent phosphorothioic triamide molecules of (I), 30.7% for the acetonitrile solvent of (I), 63.8% in the phosphorothioic triamide molecule of (II) and 62.9% in the 3-methylpiperidinium cation of (II)] outnumber the other contacts for all the components in both structures, except for the chloride anion of (II), which only receives the Cl...H contact. The phosphorothioic triamide molecules of both structures include unsaturated C atoms, thus presenting C...H/H...C interactions: 17.6 and 21% for the two symmetry-independent phosphorothioic triamide molecules in (I), and 22.7% for the phosphorothioic triamide molecule of (II). Furthermore, the N—H...S hydrogen bonds in both (I) and (II), and the N—H...Cl hydrogen bonds in (II), are the most prominent interactions, appearing as large red spots on the Hirshfeld surface maps. The N...H/H...N contacts in structure (I) are considerable, whereas for (II), they give a negligible contribution to the total interactions in the system.

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