Imperfect detection distorts depth-related trends in marine macrofaunal species richness

Ecography ◽  
2018 ◽  
Vol 41 (10) ◽  
pp. 1698-1706 ◽  
Author(s):  
Natasha Karenyi ◽  
Kerry Sink ◽  
Ronel Nel ◽  
Allan E. Clark ◽  
Res Altwegg
Keyword(s):  
Species Richness ◽  
Imperfect Detection ◽  
Macrofaunal Species

Predicting fish species richness and habitat relationships using Bayesian hierarchical multispecies occupancy models

2020 ◽  
Vol 77 (3) ◽  
pp. 602-610
Author(s):  
Shannon White ◽  
Evan Faulk ◽  
Caleb Tzilkowski ◽  
Andrew Weber ◽  
Matthew Marshall ◽  
...  
Keyword(s):  
Species Richness ◽  
Fish Community ◽  
Fish Assemblages ◽  
Similar Species ◽  
Occupancy Models ◽  
Imperfect Detection ◽  
Modeling Framework ◽  
Bayesian Hierarchical ◽  
Recreation Area ◽  
Species Occupancy

Understanding how stream fishes respond to changes in habitat availability is complicated by low occurrence rates of many species, which in turn reduces the ability to quantify species–habitat relationships and account for imperfect detection in estimates of species richness. Multispecies occupancy models have been used sparingly in the analysis of fisheries data, but address the aforementioned deficiencies by allowing information to be shared among ecologically similar species, thereby enabling species–habitat relationships to be estimated for entire fish communities, including rare species. Here, we highlight the utility of hierarchical multispecies occupancy models for the analysis of fish community data and demonstrate the modeling framework on a stream fish community dataset collected in the Delaware Water Gap National Recreation Area, USA. In particular, we demonstrate the ability of the modeling framework to make inferences at the species-, guild-, and community-levels, thereby making it a powerful tool for understanding and predicting how environmental variables influence species occupancy probabilities and structure fish assemblages.

Comparative analysis of macrofaunal species richness and composition in Posidonia oceanica, Cymodocea nodosa and leaf litter beds

2008 ◽  
Vol 153 (6) ◽  
pp. 1087-1101 ◽  
Author(s):  
S. Como ◽  
P. Magni ◽  
M. Baroli ◽  
D. Casu ◽  
G. De Falco ◽  
...  
Keyword(s):  
Species Richness ◽  
Comparative Analysis ◽  
Leaf Litter ◽  
Posidonia Oceanica ◽  
Cymodocea Nodosa ◽  
Macrofaunal Species

scholarly journals Small mammal community composition varies among Ozark glades

2019 ◽  
Vol 100 (6) ◽  
pp. 1774-1782
Author(s):  
Emily M Beasley ◽  
Sean P Maher
Keyword(s):  
Species Richness ◽  
Large Scale ◽  
Patch Area ◽  
Imperfect Detection ◽  
Community Model ◽  
Detection Probabilities ◽  
Ecological Patterns ◽  
Small Mammal Community ◽  
Mammal Community ◽  
Species Specific

Abstract Island biogeography theory (IBT) explains and estimates large-scale ecological patterns among islands and isolated habitat patches. Specifically, IBT predicts that the number of species per habitat patch differs as a function of area and isolation as a result of local colonization and extinction. Accurate estimates of species richness are essential for testing predictions of IBT, but differences in detectability of species can lead to bias in empirical data. Hierarchical community models correct for imperfect detection by leveraging information from across the community to estimate species-specific occupancy and detection probabilities. Using the fragmented Ozark glades as our model system, we constructed a hierarchical community model to 1) estimate site-level and regional species richness of small mammals while correcting for detection error, and 2) determine environmental covariates driving occupancy. We sampled 16 glades in southwestern Missouri in summer 2016–2017 and quantified mammal community structure within the glade network. The detected species pool included eight species, and the model yielded a regional species estimate of 8.6 species, with a mean of 3.47 species per glade. Species richness increased with patch area but not isolation, and effects of patch shape varied between species in the community.

Dominance determines fish community biomass in a temperate seagrass ecosystem

2019 ◽  
Author(s):  
Aaron Matthius Eger ◽  
Rebecca J. Best ◽  
Julia Kathleen Baum
Keyword(s):  
Species Richness ◽  
Ecosystem Function ◽  
Fish Community ◽  
Prey Capture ◽  
Fish Communities ◽  
Functional Trait ◽  
Ecosystem Functions ◽  
Community Biomass ◽  
Ecosystem Valuation ◽  
Species Abundances

Biodiversity and ecosystem function are often correlated, but there are multiple hypotheses about the mechanisms underlying this relationship. Ecosystem functions such as primary or secondary production may be maximized by species richness, evenness in species abundances, or the presence or dominance of species with certain traits. Here, we combined surveys of natural fish communities (conducted in July and August, 2016) with morphological trait data to examine relationships between diversity and ecosystem function (quantified as fish community biomass) across 14 subtidal eelgrass meadows in the Northeast Pacific (54° N 130° W). We employed both taxonomic and functional trait measures of diversity to investigate if ecosystem function is driven by species diversity (complementarity hypothesis) or by the presence or dominance of species with particular trait values (selection or dominance hypotheses). After controlling for environmental variation, we found that fish community biomass is maximized when taxonomic richness and functional evenness is low, and in communities dominated by species with particular trait values – those associated with benthic habitats and prey capture. While previous work on fish communities has found that species richness is positively correlated with ecosystem function, our results instead highlight the capacity for regionally prevalent and locally dominant species to drive ecosystem function in moderately diverse communities. We discuss these alternate links between community composition and ecosystem function and consider their divergent implications for ecosystem valuation and conservation prioritization.

Functional evenness of bird communities varies along the elevational gradient in Europe: Conservation implications

2019 ◽  
Author(s):  
Federico Morelli ◽  
Yanina
Keyword(s):  
Species Richness ◽  
Elevation Gradient ◽  
Bird Species ◽  
Elevational Gradient ◽  
Negative Association ◽  
Bird Communities ◽  
Breeding Bird ◽  
Bird Species Richness ◽  
Large Spatial Scale ◽  
Functional Evenness

ContextThe negative association between elevation and species richness is a well-recognized pattern in macro-ecology. ObjectivesThe aim of this study was to investigate changes in functional evenness of breeding bird communities along an elevation gradient in Europe. MethodsUsing the bird data from the EBCC Atlas of European Breeding Birds we estimated an index of functional evenness which can be assumed as a measure of the potential resilience of communities.ResultsOur findings confirm the existence of a negative association between elevation and bird species richness in all European eco regions. However, we also explored a novel aspect of this relationship, important for conservation: Our findings provide evidence at large spatial scale of a negative association between the functional evenness (potential community resilience) and elevation, independent of the eco region. We also found that the Natura2000 protected areas covers the territory most in need of protection, those characterized by bird communities with low potential resilience, in hilly and mountainous areas.ConclusionsThese results draw attention to European areas occupied by bird communities characterized by a potential lower capacity to respond to strong ecological changes, and, therefore, potentially more exposed to risks for conservation.

Plant diversity and species richness of Ljubljana marsh grasslands under the influence of different cutting and fertilizing regimes

2009 ◽  
Vol 57 (2) ◽  
pp. 197-203 ◽  
Author(s):  
T. Sinkovč
Keyword(s):  
Species Richness ◽  
Plant Diversity ◽  
Grassland Management ◽  
Botanical Composition ◽  
Significant Negative Effect ◽  
Negative Effect ◽  
Cutting Regimes ◽  
N Rates ◽  
Exploitation Intensity ◽  
Plot Design

The botanical composition of grasslands determines the agronomic and natural values of swards. Good grassland management usually improves herbage value, but on the other hand it frequently decreases the plant diversity and species richness in the swards. In 1999 a field trial in a split-plot design with four replicates was therefore established on the Arrhenatherion type of vegetation in Ljubljana marsh meadows in order to investigate this relationship. Cutting regimes (2 cuts — with normal and delayed first cut, 3 cuts and 4 cuts per year) were allocated to the main plots and fertiliser treatments (zero fertiliser — control, PK and NPK with 2 or 3 N rates) were allocated to the sub-plots. The results at the 1 st cutting in the 5 th trial year were as follows: Fertilising either with PK or NPK had no significant negative effect on plant diversity in any of the cutting regimes. In most treatments the plant number even increased slightly compared to the control. On average, 20 species were listed on both unfertilised and fertilised swards. At this low to moderate level of exploitation intensity, the increased number of cuts had no significant negative effect on plant diversity either (19 species at 2 cuts vs. 20 species at 3 or 4 cuts). PK fertilisation increased the proportion of legumes in the herbage in the case of 2 or 3 cuts. The proportion of grasses in the herbage increased in all the fertilisation treatments with an increased numbers of cuts. Fertiliser treatment considerably reduced the proportion of marsh horsetail ( Equisetum palustre ) in the herbage of the meadows. This effect was even more pronounced at higher cut numbers. The proportion of Equisetum palustre in the herbage was the highest in the unfertilised sward with 2 cuts (26.4 %) and the lowest in the NPK-fertilised sward with 4 cuts (1.4%).

The species richness-productivity relationship: time to stop searching for a "true" pattern?

2004 ◽  
Vol 5 (2) ◽  
pp. 177-180
Author(s):  
Y. Ziv ◽  
A. Tsairi
Keyword(s):  
Species Richness
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