Analysis of key genes and signaling pathways involved inHelicobacter pylori‐associated gastric cancer based on The Cancer Genome Atlas database andRNAsequencing data

Helicobacter ◽  
2018 ◽  
Vol 23 (5) ◽  
pp. e12530 ◽  
Author(s):  
Yi Hu ◽  
Cong He ◽  
Jian‐Ping Liu ◽  
Nian‐Shuang Li ◽  
Chao Peng ◽  
...  
2021 ◽  
Vol 9 (17) ◽  
pp. 4143-4158
Author(s):  
Yu-Jie Huang ◽  
Zhi-Fei Cao ◽  
Jie Wang ◽  
Jian Yang ◽  
Yi-Jun Wei ◽  
...  

2020 ◽  
Vol 9 (4) ◽  
pp. 2599-2608
Author(s):  
Xiqiao Liu ◽  
Liying Gao ◽  
Dongqiong Ni ◽  
Chengao Ma ◽  
Yuping Lu ◽  
...  

FEBS Open Bio ◽  
2020 ◽  
Vol 10 (3) ◽  
pp. 455-467 ◽  
Author(s):  
Daichi Sadato ◽  
Mina Ogawa ◽  
Chizuko Hirama ◽  
Tsunekazu Hishima ◽  
Shin‐Ichiro Horiguchi ◽  
...  

Epigenomics ◽  
2021 ◽  
Author(s):  
Junyu Huo ◽  
Liqun Wu ◽  
Yunjin Zang

Aims: To investigate the prognostic significance of hypoxia- and ferroptosis-related genes for gastric cancer (GC). Materials & methods: We extracted data on 259 hypoxia- and ferroptosis-related genes from The Cancer Genome Atlas and identified the differentially expressed genes between normal (n = 32) and tumor (n = 375) tissues. A risk score was established by univariate Cox regression analysis and LASSO penalized Cox regression analysis. Results: The risk score contained eight genes showed good performance in predicting overall survival and relapse-free survival in GC patients in both the training cohort (The Cancer Genome Atlas, n = 350) and the testing cohorts (GSE84437, n = 431; GSE62254, n = 300; GSE15459, n = 191; GSE26253, n = 432). Conclusion: The eight-gene signature may help to the improve the prognostic risk classification of GC.


Cell ◽  
2018 ◽  
Vol 173 (2) ◽  
pp. 321-337.e10 ◽  
Author(s):  
Francisco Sanchez-Vega ◽  
Marco Mina ◽  
Joshua Armenia ◽  
Walid K. Chatila ◽  
Augustin Luna ◽  
...  

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