High genetic diversity and connectivity in the polyploid invasive seaweedAsparagopsis taxiformis(Bonnemaisoniales) in the Mediterranean, explored with microsatellite alleles and multilocus genotypes

2009 ◽  
Vol 18 (2) ◽  
pp. 212-226 ◽  
Author(s):  
NIKOS ANDREAKIS ◽  
WIEBE H. C. F. KOOISTRA ◽  
GABRIELE PROCACCINI
PLoS ONE ◽  
2014 ◽  
Vol 9 (4) ◽  
pp. e93146 ◽  
Author(s):  
Mehdi Hosseini-Mazinani ◽  
Roberto Mariotti ◽  
Bahareh Torkzaban ◽  
Massoma Sheikh-Hassani ◽  
Saeedeh Ataei ◽  
...  

2021 ◽  
Vol 72 (1) ◽  
pp. 131
Author(s):  
Romana Gracan ◽  
Bojan Lazar ◽  
Sara Zupan ◽  
Elena Bužan

Spiny dogfish Squalus acanthias is a widely distributed, highly migratory mesopredatory shark that is extremely sensitive to overexploitation. Because of unregulated targeted and incidental capture and a lack of enforceable management in the Mediterranean Sea, the spiny dogfish subpopulation has declined by at least 50% in the Mediterranean Sea over the past 75–105 years, and is regionally classified as endangered. In this study we sampled 124 spiny dogfish in the northern-most part of the Mediterranean (i.e. the Adriatic Sea) to: (1) assess levels of genetic diversity using 13 microsatellite loci and mitochondrial (mt)DNA (NADH dehydrogenase subunit 2 (ND2) gene); and (2) infer its evolutionary placement while assessing further possible genetic divergence across the Atlantic and Pacific Ocean basins based on ND2. Analysis of mtDNA revealed 12 unique haplotypes and a high level of genetic variation in the Mediterranean region, whereas results from microsatellite markers showed significant genetic heterogeneity and a fine-scale stock structuring involving both sexes. The findings support an Atlantic–South Pacific origin for the spiny dogfish in the Adriatic Sea, with little or no present-day connectivity with the Atlantic population. Consequently, this commercially exploited and regionally endangered coastal shark in the Adriatic Sea should be considered as a separate management unit, with implementation of regional protective management plans.


Author(s):  
Alba Rey-Iglesia ◽  
Philippe Gaubert ◽  
Gonçalo Espregueira Themudo ◽  
Rosa Pires ◽  
Constanza De La Fuente ◽  
...  

Abstract The Mediterranean monk seal Monachus monachus is one of the most threatened marine mammals, with only 600–700 individuals restricted to three populations off the coast of Western Sahara and Madeira (North Atlantic) and between Greece and Turkey (eastern Mediterranean). Its original range was from the Black Sea (eastern Mediterranean) to Gambia (western African coast), but was drastically reduced by commercial hunting and human persecution since the early stages of marine exploitation. We here analyse 42 mitogenomes of Mediterranean monk seals, from across their present and historical geographic ranges to assess the species population dynamics over time. Our data show a decrease in genetic diversity in the last 200 years. Extant individuals presented an almost four-fold reduction in genetic diversity when compared to historical specimens. We also detect, for the first time, a clear segregation between the two North Atlantic populations, Madeira and Cabo Blanco, regardless of their geographical proximity. Moreover, we show the presence of historical gene-flow between the two water basins, the Atlantic Ocean and the Mediterranean Sea, and the presence of at least one extinct maternal lineage in the Mediterranean. Our work demonstrates the advantages of using full mitogenomes in phylogeographic and conservation genomic studies of threatened species.


2007 ◽  
Vol 114 (4) ◽  
pp. 263-267 ◽  
Author(s):  
H. Ayanoğlu ◽  
S. Bayazit ◽  
G. İnan ◽  
M. Bakır ◽  
A.E. Akpınar ◽  
...  

Pathogens ◽  
2021 ◽  
Vol 10 (2) ◽  
pp. 89
Author(s):  
Jiayu Li ◽  
Fuxian Yang ◽  
Ruobing Liang ◽  
Sheng Guo ◽  
Yaqiong Guo ◽  
...  

Cryptosporidiumfelis is an important cause of feline and human cryptosporidiosis. However, the transmission of this pathogen between humans and cats remains controversial, partially due to a lack of genetic characterization of isolates from cats. The present study was conducted to examine the genetic diversity of C. felis in cats in China and to assess their potential zoonotic transmission. A newly developed subtyping tool based on a sequence analysis of the 60-kDa glycoprotein (gp60) gene was employed to identify the subtypes of 30 cat-derived C. felis isolates from Guangdong and Shanghai. Altogether, 20 C. felis isolates were successfully subtyped. The results of the sequence alignment showed a high genetic diversity, with 13 novel subtypes and 2 known subtypes of the XIXa subtype family being identified. The known subtypes were previously detected in humans, while some of the subtypes formed well-supported subclusters with human-derived subtypes from other countries in a phylogenetic analysis of the gp60 sequences. The results of this study confirmed the high genetic diversity of the XIXa subtype family of C. felis. The common occurrence of this subtype family in both humans and cats suggests that there could be cross-species transmission of C. felis.


2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Sunčica Stipoljev ◽  
Toni Safner ◽  
Pavao Gančević ◽  
Ana Galov ◽  
Tina Stuhne ◽  
...  

AbstractThe aoudad (Ammotragus lervia Pallas 1777) is an ungulate species, native to the mountain ranges of North Africa. In the second half of the twentieth century, it was successfully introduced in some European countries, mainly for hunting purposes, i.e. in Croatia, the Czech Republic, Italy, and Spain. We used neutral genetic markers, the mitochondrial DNA control region sequence and microsatellite loci, to characterize and compare genetic diversity and spatial pattern of genetic structure on different timeframes among all European aoudad populations. Four distinct control region haplotypes found in European aoudad populations indicate that the aoudad has been introduced in Europe from multiple genetic sources, with the population in the Sierra Espuña as the only population in which more than one haplotype was detected. The number of detected microsatellite alleles within all populations (< 3.61) and mean proportion of shared alleles within all analysed populations (< 0.55) indicates relatively low genetic variability, as expected for new populations funded by a small number of individuals. In STRUCTURE results with K = 2–4, Croatian and Czech populations cluster in the same genetic cluster, indicating joined origin. Among three populations from Spain, Almeria population shows as genetically distinct from others in results, while other Spanish populations diverge at K = 4. Maintenance of genetic diversity should be included in the management of populations to sustain their viability, specially for small Czech population with high proportion of shared alleles (0.85) and Croatian population that had the smallest estimated effective population size (Ne = 5.4).


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