Applying deep learning to imaging sonar for the automated detection, classification and counting of untagged fish in fish passages

2021 ◽  
Vol 150 (4) ◽  
pp. A256-A256
Author(s):  
Vishnu Kandimalla ◽  
Matt Richard ◽  
Frank Smith ◽  
Tracey W. Steig ◽  
Chris Whidden ◽  
...  
2021 ◽  
Vol 13 (14) ◽  
pp. 2671
Author(s):  
Xiaoqin Zang ◽  
Tianzhixi Yin ◽  
Zhangshuan Hou ◽  
Robert P. Mueller ◽  
Zhiqun Daniel Deng ◽  
...  

Adult American eels (Anguilla rostrata) are vulnerable to hydropower turbine mortality during outmigration from growth habitat in inland waters to the ocean where they spawn. Imaging sonar is a reliable and proven technology for monitoring of fish passage and migration; however, there is no efficient automated method for eel detection. We designed a deep learning model for automated detection of adult American eels from sonar data. The method employs convolution neural network (CNN) to distinguish between 14 images of eels and non-eel objects. Prior to image classification with CNN, background subtraction and wavelet denoising were applied to enhance sonar images. The CNN model was first trained and tested on data obtained from a laboratory experiment, which yielded overall accuracies of >98% for image-based classification. Then, the model was trained and tested on field data that were obtained near the Iroquois Dam located on the St. Lawrence River; the accuracy achieved was commensurate with that of human experts.


2020 ◽  
Vol 49 (10) ◽  
pp. 1623-1632
Author(s):  
Paul H. Yi ◽  
Tae Kyung Kim ◽  
Jinchi Wei ◽  
Xinning Li ◽  
Gregory D. Hager ◽  
...  

Sensors ◽  
2021 ◽  
Vol 21 (11) ◽  
pp. 3813
Author(s):  
Athanasios Anagnostis ◽  
Aristotelis C. Tagarakis ◽  
Dimitrios Kateris ◽  
Vasileios Moysiadis ◽  
Claus Grøn Sørensen ◽  
...  

This study aimed to propose an approach for orchard trees segmentation using aerial images based on a deep learning convolutional neural network variant, namely the U-net network. The purpose was the automated detection and localization of the canopy of orchard trees under various conditions (i.e., different seasons, different tree ages, different levels of weed coverage). The implemented dataset was composed of images from three different walnut orchards. The achieved variability of the dataset resulted in obtaining images that fell under seven different use cases. The best-trained model achieved 91%, 90%, and 87% accuracy for training, validation, and testing, respectively. The trained model was also tested on never-before-seen orthomosaic images or orchards based on two methods (oversampling and undersampling) in order to tackle issues with out-of-the-field boundary transparent pixels from the image. Even though the training dataset did not contain orthomosaic images, it achieved performance levels that reached up to 99%, demonstrating the robustness of the proposed approach.


Author(s):  
Falk Schwendicke ◽  
Akhilanand Chaurasia ◽  
Lubaina Arsiwala ◽  
Jae-Hong Lee ◽  
Karim Elhennawy ◽  
...  

Abstract Objectives Deep learning (DL) has been increasingly employed for automated landmark detection, e.g., for cephalometric purposes. We performed a systematic review and meta-analysis to assess the accuracy and underlying evidence for DL for cephalometric landmark detection on 2-D and 3-D radiographs. Methods Diagnostic accuracy studies published in 2015-2020 in Medline/Embase/IEEE/arXiv and employing DL for cephalometric landmark detection were identified and extracted by two independent reviewers. Random-effects meta-analysis, subgroup, and meta-regression were performed, and study quality was assessed using QUADAS-2. The review was registered (PROSPERO no. 227498). Data From 321 identified records, 19 studies (published 2017–2020), all employing convolutional neural networks, mainly on 2-D lateral radiographs (n=15), using data from publicly available datasets (n=12) and testing the detection of a mean of 30 (SD: 25; range.: 7–93) landmarks, were included. The reference test was established by two experts (n=11), 1 expert (n=4), 3 experts (n=3), and a set of annotators (n=1). Risk of bias was high, and applicability concerns were detected for most studies, mainly regarding the data selection and reference test conduct. Landmark prediction error centered around a 2-mm error threshold (mean; 95% confidence interval: (–0.581; 95 CI: –1.264 to 0.102 mm)). The proportion of landmarks detected within this 2-mm threshold was 0.799 (0.770 to 0.824). Conclusions DL shows relatively high accuracy for detecting landmarks on cephalometric imagery. The overall body of evidence is consistent but suffers from high risk of bias. Demonstrating robustness and generalizability of DL for landmark detection is needed. Clinical significance Existing DL models show consistent and largely high accuracy for automated detection of cephalometric landmarks. The majority of studies so far focused on 2-D imagery; data on 3-D imagery are sparse, but promising. Future studies should focus on demonstrating generalizability, robustness, and clinical usefulness of DL for this objective.


2021 ◽  
Vol 130 ◽  
pp. 103877
Author(s):  
Yongqi Wei ◽  
Zhenhua Wei ◽  
Kaixi Xue ◽  
Wu Yao ◽  
Changying Wang ◽  
...  

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