scholarly journals Complete Genome Sequence ofBacillus subtilisStrain CU1050, Which Is Sensitive to Phage SPβ

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Christopher M. Johnson ◽  
Alan D. Grossman
Keyword(s):  
Bacillus Subtilis ◽  
Complete Genome Sequence ◽  
Genomic Sequence ◽  
Model Organism ◽  
Complete Genomic Sequence ◽  
Molecular Processes ◽  
Positive Bacterium ◽  
Suppressor Mutations ◽  
Lysogenic Phage ◽  
Complete Genomic

The Gram-positive bacteriumBacillus subtilisis used as a model organism to study cellular and molecular processes. Here, we announce the complete genomic sequence ofB. subtilisstrain CU1050, derived fromB. subtilisstrain 168. CU1050 has historically been used to study suppressor mutations and phage biology, especially the lysogenic phage SPβ.

scholarly journals Complete Genome Sequence ofAggregatibacter actinomycetemcomitansStrain IDH781

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Anthony C. May ◽  
Rachel L. Ehrlich ◽  
Sergey Balashov ◽  
Garth D. Ehrlich ◽  
Mayilvahanan Shanmugam ◽  
...  
Keyword(s):  
Oral Cavity ◽  
Complete Genome Sequence ◽  
Genomic Sequence ◽  
Model Organism ◽  
Aggressive Periodontitis ◽  
Oral Microbiome ◽  
Complete Genomic Sequence ◽  
Rough Strain ◽  
Basic Biology ◽  
Complete Genomic

We report here the complete genomic sequence and methylome ofAggregatibacter actinomycetemcomitansstrain IDH781. This rough strain is used extensively as a model organism to characterize localized aggressive periodontitis pathogenesis, the basic biology and oral cavity colonization ofA. actinomycetemcomitans, and its interactions with other members of the oral microbiome.

scholarly journals Complete Genome Sequence of Lymantria dispar multiple nucleopolyhedrovirus Isolated in Southwestern Poland

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Martyna Krejmer-Rabalska ◽  
Lukasz Rabalski ◽  
Iwona Skrzecz ◽  
Boguslaw Szewczyk
Keyword(s):  
Gypsy Moth ◽  
Lymantria Dispar ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Genome Structure ◽  
Reference Sequence ◽  
Complete Genomic Sequence ◽  
Multiple Nucleopolyhedrovirus ◽  
Complete Genomic

We report here the complete genomic sequence of Polish alphabaculovirus isolated from dead gypsy moth caterpillars. Its genome structure and G+C content indicate that it is a Lymantria dispar multiple nucleopolyhedrovirus (LdMNPV) strain which possesses the shortest sequence among eight other (similar to reference sequence AF081810) LdMNPV sequences available in GenBank; it is 159,729 bp long.

scholarly journals Complete Genome Sequence of Potato Virus T from Bolivia, Obtained from a 33-Year-Old Sample

2018 ◽  
Vol 7 (18) ◽  
Author(s):  
Ian P. Adams ◽  
Jorge Abad ◽  
Cesar E. Fribourg ◽  
Neil Boonham ◽  
Roger A. C. Jones
Keyword(s):  
Genome Sequence ◽  
Potato Virus ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Potato Sample ◽  
Type Isolate ◽  
Andean Potato ◽  
Complete Genomic

We present the complete genomic sequence of a Potato virus T (PVT) isolate originally obtained from a Bolivian potato sample collected in 1976, and we compare it with the genome of the PVT type isolate from Peru. There is an 81% nucleotide identity between the two genomes of this Andean potato virus.

scholarly journals Complete Genome Sequence of Neisseria weaveri Strain NCTC13585

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Sarah Alexander ◽  
Mohammed-Abbas Fazal ◽  
Edward Burnett ◽  
Ana Deheer-Graham ◽  
Karen Oliver ◽  
...  
Keyword(s):  
Oral Cavity ◽  
Complete Genome Sequence ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Human Pathogen ◽  
Dog Bite ◽  
Bite Wound ◽  
Opportunistic Human Pathogen ◽  
Bite Wounds ◽  
Complete Genomic

Neisseria weaveri is a commensal organism of the canine oral cavity and an occasional opportunistic human pathogen which is associated with dog bite wounds. Here we report the first complete genomic sequence of the N. weaveri NCTC13585 (CCUG30381) strain, which was originally isolated from a patient with a canine bite wound.

scholarly journals Complete Genome Sequence of a Genotype III Japanese Encephalitis Virus, Isolated from Pigs in Sichuan, China

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Yuancheng Zhou ◽  
Xiuping Zhuo ◽  
Jianqiang Ye ◽  
Yuhan Cai
Keyword(s):  
Phylogenetic Analysis ◽  
Japanese Encephalitis Virus ◽  
Japanese Encephalitis ◽  
Complete Genome Sequence ◽  
Genomic Sequence ◽  
Encephalitis Virus ◽  
Complete Genomic Sequence ◽  
Metagenome Analysis ◽  
Genotype Iii ◽  
Complete Genomic

A complete genomic sequence of Japanese encephalitis virus (JEV) was detected by viral metagenome analysis on aborted piglets. A phylogenetic analysis of this genome reveals that it is highly similar to previously reported India JEV genomes. The complete JEV sequence is 10,718 nucleotides long.

scholarly journals Complete Genome Sequence of a South Korean Isolate of Habenaria mosaic virus

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Davaajargal Igori ◽  
Seungmo Lim ◽  
Fumei Zhao ◽  
Dasom Baek ◽  
Jae Sun Moon
Keyword(s):  
Mosaic Virus ◽  
High Throughput ◽  
Complete Genome Sequence ◽  
Genomic Sequence ◽  
Korean Isolate ◽  
Complete Genomic Sequence ◽  
South Korean ◽  
Plantago Asiatica ◽  
The Family ◽  
Complete Genomic

Habenaria mosaic virus (HaMV), a member of the genus Potyvirus in the family Potyviridae , was first discovered from Habenaria radiata in Japan . The complete genomic sequence of a South Korean isolate (PA1) of HaMV infecting Plantago asiatica L. was determined with high-throughput RNA sequencing.

scholarly journals Complete Genome Sequence ofEscherichia coliER1821R, a Laboratory K-12 Derivative Engineered To Be Deficient in All Methylcytosine and Methyladenine Restriction Systems

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Michael G. Jobling ◽  
Elisabeth A. Raleigh ◽  
Daniel N. Frank
Keyword(s):  
Escherichia Coli ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Laboratory Strain ◽  
Complete Genomic Sequence ◽  
Immigration Control ◽  
K 12 ◽  
Methylation Patterns ◽  
Complete Genomic

We present here the complete genomic sequence of a rifampin-resistant derivative of theEscherichia coliK-12 laboratory strain ER1821, engineered to be deficient in all known restriction systems, making it suitable for generating unbiased libraries from organisms with non-K-12 methylation patterns. The ER1821R genome is most closely related to that of DH1, another popular cloning strain (both derived from MM294), but is deleted for thee14prophage (McrA-) and the immigration control (McrBC-EcoKI R-M-Mrr-) loci.

scholarly journals Complete Genomic Sequence of Dengue Virus Serotype 4 Isolated from Plasma Collected from a Haitian Child in 2014

2017 ◽  
Vol 5 (40) ◽  
Author(s):  
Maha A. Elbadry ◽  
Sarah K. White ◽  
Julia C. Loeb ◽  
Massimiliano S. Tagliamonte ◽  
Marco Salemi ◽  
...  
Keyword(s):  
South America ◽  
Dengue Virus ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Virus Serotype ◽  
Genotype Ii ◽  
Complete Genomic

ABSTRACT While data are limited, there is increasing evidence that infections by dengue viruses are endemic in Haiti. In 2014, an outbreak caused by dengue virus 4 (DENV-4) followed a chikungunya fever outbreak. We present here the complete genome sequence of one isolate grouped within the genotype II South America and Caribbean DENV-4 clades.

scholarly journals Complete Genome Sequence of Porcine Parvovirus 2 Recovered from Swine Sera

2016 ◽  
Vol 4 (1) ◽  
Author(s):  
F. S. Campos ◽  
M. Kluge ◽  
A. C. Franco ◽  
A. Giongo ◽  
F. P. Valdez ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Genome Sequence ◽  
North American ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Porcine Parvovirus ◽  
Complete Genomic Sequence ◽  
Metagenome Analysis ◽  
Complete Genomic

A complete genomic sequence of porcine parvovirus 2 (PPV-2) was detected by viral metagenome analysis on swine sera. A phylogenetic analysis of this genome reveals that it is highly similar to previously reported North American PPV-2 genomes. The complete PPV-2 sequence is 5,426 nucleotides long.

scholarly journals Complete Genome Sequence of Vibrio gazogenes ATCC 43942

2017 ◽  
Vol 5 (30) ◽  
Author(s):  
Phani M. Gummadidala ◽  
Michael E. Holder ◽  
Jacqueline L. O’Brien ◽  
Nadim J. Ajami ◽  
Joseph F. Petrosino ◽  
...  
Keyword(s):  
Knowledge Base ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Content Type ◽  
Complete Genomic

ABSTRACT Vibrio gazogenes ATCC 43942 has the potential to synthesize a plethora of metabolites which are of clinical and agricultural significance in response to environmental triggers. The complete genomic sequence of Vibrio gazogenes ATCC 43942 is reported herein, contributing to the knowledge base of strains in the Vibrio genus.

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