scholarly journals Draft Genome Sequence of Lawsonia intracellularis Strain E40504, Isolated from a Horse Diagnosed with Equine Proliferative Enteropathy

2017 ◽  
Vol 5 (19) ◽  
Author(s):  
Nandita S. Mirajkar ◽  
Molly R. Kelley ◽  
Connie J. Gebhart
Keyword(s):  
Genome Sequence ◽  
Genomic Island ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Lawsonia Intracellularis ◽  
Protein Coding ◽  
Content Type ◽  
Obligate Intracellular ◽  
Proliferative Enteropathy ◽  
Rna Genes

ABSTRACT Reported herein is the draft genome sequence of equine-origin Lawsonia intracellularis strain E40504, an obligate intracellular bacterium and the etiological agent of equine proliferative enteropathy. The 1.69-Mb draft genome sequence includes 1,380 protein-coding genes and 49 RNA genes, and it lacks a genomic island reported in swine-origin L. intracellularis strain PHE/MN1-00.

scholarly journals Draft Genome Sequence of the Multiple Antibiotic Producer Bacillus velezensis X-BIO-1

2020 ◽  
Vol 9 (50) ◽  
Author(s):  
S. V. Kravchenko ◽  
D. V. Poshvina ◽  
A. V. Vasilchenko ◽  
A. S. Vasilchenko
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Bacillus Velezensis ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

ABSTRACT Here, we describe the draft genome sequence of Bacillus velezensis strain X-BIO-1, which contains 16 contigs, comprising 3,861,135 bp with a G+C content of 46.54%. The annotated draft genome contains 3,710 protein-coding genes and 62 RNA genes. We identified genes responsible for the synthesis of various antibiotics.

scholarly journals Draft Genome Sequence of Mycobacterium colombiense

2017 ◽  
Vol 5 (14) ◽  
Author(s):  
Amar Bouam ◽  
Catherine Robert ◽  
Anthony Levasseur ◽  
Michel Drancourt
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Positive Patient ◽  
Draft Genome Sequence ◽  
Hiv Positive ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

ABSTRACT Mycobacterium colombiense is a rapidly growing mycobacterium initially isolated from the blood of an HIV-positive patient in Colombia. Its 5,854,893-bp draft genome exhibits a G+C content of 67.64%, 5,233 protein-coding genes, and 54 predicted RNA genes.

scholarly journals Draft Genome Sequence of Paenisporosarcina sp. Strain TG-20, a Psychrophilic Bacterium Isolated from the Basal Ice of Taylor Glacier

2012 ◽  
Vol 194 (23) ◽  
pp. 6636-6636
Author(s):  
Jun Hyuck Lee ◽  
Hye Yeon Koh ◽  
Sung Gu Lee ◽  
Shawn Doyle ◽  
Brent C. Christner ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Psychrophilic Bacterium ◽  
Protein Coding ◽  
Content Type ◽  
Basal Ice ◽  
Subsurface Environments ◽  
Taylor Glacier ◽  
Rna Genes

ABSTRACTWe report the draft genome sequence ofPaenisporosarcinasp. strain TG-20, which is 4.12 Mb in size and consists of 4,071 protein-coding genes and 76 RNA genes. The genome sequence ofPaenisporosarcinasp. TG-20 may provide useful information about molecular adaptations that enhance survival in icy subsurface environments.

scholarly journals Draft Genome Sequence of Mycobacterium shimoidei Strain P7336

2018 ◽  
Vol 7 (13) ◽  
Author(s):  
Jamal Saad ◽  
Anthony Levasseur ◽  
Michel Drancourt
Keyword(s):  
Genome Sequence ◽  
Messenger Rna ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Nontuberculous Mycobacterium ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Slow Growing ◽  
Rna Genes

Mycobacterium shimoidei, a slow-growing, nontuberculous mycobacterium initially isolated from a Japanese man, is a rare opportunistic lung pathogen. The 4,842,631-bp draft genome of M. shimoidei strain P7336 exhibits a 65.7% G+C content, 4,643 protein-coding genes, and 57 predicted RNA genes, including 49 tRNAs, 7 rRNA operons, and 1 transfer-messenger RNA.

scholarly journals Draft Genome Sequence of a Multidrug-Resistant Serratia marcescens Strain, Isolated from a Patient with Peritoneal Cancer in South Africa

2017 ◽  
Vol 5 (26) ◽  
Author(s):  
Ashika Singh-Moodley ◽  
Olga Perovic ◽  
Senzo Mtshali ◽  
Arshad Ismail ◽  
Mushal Allam
Keyword(s):  
Serratia Marcescens ◽  
South African ◽  
Genome Sequence ◽  
Draft Genome ◽  
Multidrug Resistant ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Content Type ◽  
Peritoneal Cancer ◽  
Rna Genes

ABSTRACT We report here the draft genome sequence of Serratia marcescens ML2637, isolated from a South African pediatric patient in the intensive care unit with peritoneal cancer. The genome comprised 5,718,350 bp, with a 59.1% G+C content. There were 5,594 predicted genes, including 5,301 protein-coding genes, 199 pseudogenes, and 94 RNA genes.

scholarly journals Draft Genome Sequence of Mycobacterium parafortuitum Strain P7335

2018 ◽  
Vol 7 (8) ◽  
Author(s):  
Jamal Saad ◽  
Anthony Levasseur ◽  
Michel Drancourt
Keyword(s):  
Genome Sequence ◽  
Messenger Rna ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Nontuberculous Mycobacterium ◽  
Trna Genes ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

Mycobacterium parafortuitum is a rapidly growing nontuberculous mycobacterium, initially isolated from soil in Japan. The 6,175,772-bp draft genome sequence of M. parafortuitum strain P7335 exhibits a G+C content of 68.4%, 5,783 protein-coding genes, and 66 predicted RNA genes, including 59 tRNA genes, 6 rRNA operons, and 1 transfer-messenger RNA.

scholarly journals Draft Genome Sequences of Lawsonia intracellularis Swine Strains Causing Proliferative Enteropathy in Japan

2018 ◽  
Vol 7 (9) ◽  
Author(s):  
Sayaka Nishikawa ◽  
Yohsuke Ogawa ◽  
Masahiro Eguchi ◽  
Anura Rambukkana ◽  
Yoshihiro Shimoji
Keyword(s):  
Genomic Island ◽  
Draft Genome ◽  
Host Adaptation ◽  
Genomic Diversity ◽  
Geographical Proximity ◽  
Lawsonia Intracellularis ◽  
Genome Sequences ◽  
Content Type ◽  
Obligate Intracellular ◽  
Proliferative Enteropathy

The draft genome sequences of three strains of Lawsonia intracellularis, an obligate intracellular animal pathogen responsible for causing proliferative enteropathy, obtained from swine in different prefectures in Japan revealed the absence of a genomic island previously reported to be linked to host adaptation and to high genomic diversity, despite geographical proximity.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of Freshwater-Derived Streptomyces sp. Strain BPSDS2, Isolated from Damte Stream, Northeast India

2019 ◽  
Vol 8 (43) ◽  
Author(s):  
Zothanpuia ◽  
Ajit Kumar Passari ◽  
Purbajyoti Deka ◽  
Vinay Rajput ◽  
Lakshmi P. M. Priya ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Northeast India ◽  
Draft Genome Sequence ◽  
Freshwater Sediments ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Streptomyces Sp

We report the draft genome sequence of Streptomyces sp. strain BPSDS2, isolated from freshwater sediments in Northeast India. The draft genome has a size of 8.27 Mb and 7,559 protein-coding sequences.

scholarly journals Draft Genome Sequence of Streptomyces cavourensis YBQ59, an Endophytic Producer of Antibiotics Bafilomycin D, Nonactic Acid, Prelactone B, and 5,11-Epoxy-10-Cadinanol

2018 ◽  
Vol 7 (11) ◽  
Author(s):  
Huy Quang Nguyen ◽  
Nguyen Thi-Hanh Vu ◽  
Ha Hoang Chu ◽  
Son Ky Chu ◽  
Ha Hoang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

This study reports the draft genome sequence of the endophytic Streptomyces cavourensis strain YBQ59, produces the antibiotics bafilomycin D, nonactic acid, prelactone B, and 5,11-epoxy-10-cadinanol. The draft genome sequence comprises ∼10.2 Mb, with a GC content of 64% and 8,958 predicted protein-coding genes, of which 14 gene clusters were found to associate with antibiotic biosynthetic pathways.

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