Extremophilic Microorganisms in Central Europe

Extremophiles inhabit a wide variety of environments. Here we focus on extremophiles in moderate climates in central Europe, and particularly in Slovenia. Although multiple types of stress often occur in the same habitat, extremophiles are generally combined into groups according to the main stressor to which they are adapted. Several types of extremophiles, e.g., oligotrophs, are well represented and diverse in subsurface environments and karst regions. Psychrophiles thrive in ice caves and depressions with eternal snow and ice, with several globally distributed snow algae and psychrophilic bacteria that have been discovered in alpine glaciers. However, this area requires further research. Halophiles thrive in salterns while thermophiles inhabit thermal springs, although there is little data on such microorganisms in central Europe, despite many taxa being found globally. This review also includes the potential use of extremophiles in biotechnology and bioremediation applications.

Nanoplastic transport in aqueous environments: The role of chemo-electric properties and hydrodynamic forces for nanoplastic-mineral interaction.

The fate and transport characteristics of nanoplastic (NP) through different environmental systems is largely governed by physio-chemical processes and their specific interaction with environmental constituents (i.e., minerals, dissolved species, suspended particles). A hydrodynamic component present in almost all terrestrial and marine aqueous environments impact the physio-chemical processes micron-scale is largely overlooked in NP transport studies. Therefore, we tested the interaction behavior of nanosized plastic polystyrene particles of various coatings in the presence of minerals abundant in the Earth crust within a hydrodynamic continuum representing flow rates from groundwater to surface water systems. Our batch experiments show that particle-mineral adsorption is largely driven by the magnitude of opposite charge configurations, which is either produced by mineral type or specific nanoplastic surface coating. Zetapotential serves as a good predictor of adsorption between uncoated and carboxyl-coated polystyrene with minerals. It fails, however, to predict adsorption behavior between NH2 coated polystyrene and apatite or feldspars, due to the more complex and varying compositions of these minerals. Incorporating the hydrodynamic force component into the particle- mineral interaction scheme reproduces those adsorption trends at slow flowrates of 1e-04 m/d. However, increasing flow rates by a factor of 100 modifies charge-driven adsorption between minerals and plastics. This study highlights the unabating importance of hydrodynamic conditions when predicting nanoplastic transport in different subsurface environments, and has implications for nanoplastic behavior in both terrestrial and marine aqueous environments.

Morpho-Mineralogical and Bio-Geochemical Description of Cave Manganese Stromatolite-Like Patinas (Grotta del Cervo, Central Italy) and Hints on Their Paleohydrological-Driven Genesis

Caves are dark subsurface environments with relatively constant temperatures that allow studying bio-mineralization processes and paleoenvironmental or climate changes in optimal conditions. In the extreme and oligotrophic cave environment, manganese patinas having stromatolite-like features are uncommon. Here we provide the first detailed mineralogical, geochemical, and microbiological investigation of fine-grained and poorly crystalline MnFe stromatolite-like wall patinas formed in a deep-cave environment in Italy. These mineralizations, about 3 mm thick, consist of an alternation of Mn-layers and Fe-lenses. We show that the microbial communities' composition is dominated by Mn-oxidizing bacteria, such as Bacillus, Flavobacterium, and Pseudomonas. Our multidisciplinary investigation, integrating data from different analytical techniques (i.e., optical microscopy, SEM-EDS, μXRF, XRPD, FT-IR, Raman spectroscopy, and DNA sequencing), revealed peculiar chemical, mineralogical, and biological features: 1) A cyclical oscillation of Mn and Fe along the growth of the patinas. We propose that this oscillation represents the shift between oxic and suboxic conditions related to different phases occurring during paleo-flood events; 2) A typical spatial distribution of mineralogy and oxidation state of Mn, bacterial imprints, detrital content, and stromatolite-like morphologies along the Mn-layers. We propose that this distribution is controlled by the local hydraulic regime of the paleo-floods, which, in turn, is directly related to the morphology of the wall surface. Under less turbulent conditions, the combination of clay mineral catalysis and biological oxidation produced vernadite, a poor-crystalline phyllomanganate with a low average oxidation state of Mn, and branched columnar stromatolite-like morphologies. On the other hand, under more turbulent conditions, the sedimentation of clay minerals and microbial communities' development are both inhibited. In this local environment, a lower oxidation rate of Mn2+ favored the formation of todorokite and/or ranciéite, two compounds with a high average oxidation state of Mn, and flat-laminated or columnar stromatolite-like morphologies.

Investigation and analysis of groundwater-derived damage to the Shahe ancient bridge site in Xi’an, China

Earthen cultural ruins and their subsurface environments act as carriers or support for aboveground cultural heritage artefacts, and groundwater has been identified as the most important factor accelerating the destruction of ruins. In this paper, a wooden structure on the site of the Xianyang Shahe ancient bridge is taken as the research object. Through geotechnical surveys and site sample analyses, the relationship between the environment and cause of damage at the site is explored. Fluctuations in groundwater level are found to affect the movement of water and salt, thereby accelerating deterioration and allowing microbes and other soil inhabitants and plants to erode the ruins. Furthermore, strong correlations are revealed between the stratigraphy of the area and both ruin status and sample analysis results. Geotechnical investigation data are used to predict the effects of various damaging factors on long-term preservation and the underlying mechanisms and to propose feasible, long-term countermeasures for preservation studies.

The Role of Surface Hydrophobicity on the Structure and Dynamics of CO2 and CH4 Confined in Silica Nanopores

Advancing a portfolio of technologies that range from the storage of excess renewable natural gas for distributed use to the capture and storage of CO2 in geological formation are essential for meeting our energy needs while responding to challenges associated with climate change. Delineating the surface interactions and the organization of these gases in nanoporous environments is one of the less explored approaches to ground advances in novel materials for gas storage or predict the fate of stored gases in subsurface environments. To this end, the molecular scale interactions underlying the organization and transport behavior of CO2 and CH4 molecules in silica nanopores need to be investigated. To probe the influence of hydrophobic surfaces, a series of classical molecular dynamics (MD) simulations are performed to investigate the structure and dynamics of CO2 and CH4 confined in OH-terminated and CH3-terminated silica pores with diameters of 2, 4, 6, 8, and 10 nm at 298 K and 10 MPa. Higher adsorption extents of CO2 compared to CH4 are noted on OH-terminated and CH3-terminated pores. The adsorbed extents increase with the pore diameter. Further, the interfacial CO2 and CH4 molecules reside closer to the surface of OH-terminated pores compared to CH3-terminated pores. The lower adsorption extents of CH4 on OH-terminated and CH3-terminated pores result in higher diffusion coefficients compared to CO2 molecules. The diffusivities of both gases in OH-terminated and CH3-terminated pores increase systematically with the pore diameter. The higher adsorption extents of CO2 on OH-terminated and CH3-terminated pores are driven by higher van der Waals and electrostatic interactions with the pore surfaces, while CH4 adsorption is mainly due to van der Waals interactions with the pore walls. These findings provide the interfacial chemical basis underlying the organization and transport behavior of pressurized CO2 and CH4 gases in confinement.

Contaminant Transport and Fate

This Special Issue highlights many of the predominant contaminant transport and fate processes that redistribute solutes through natural and engineered surface and subsurface environments [...]