scholarly journals Draft Genome Sequence of Nocardia jinanensis , an Opportunistic Bacterial Pathogen That Causes Cellulitis

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Alolika Chakrabortti ◽  
Jinming Li ◽  
Zhao-Xun Liang
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Draft Genome ◽  
Bacterial Pathogen ◽  
Opportunistic Pathogen ◽  
Draft Genome Sequence ◽  
Skin Infections ◽  
Nonribosomal Peptide ◽  
Mycolic Acids

The draft genome sequence of  Nocardia jinanensis , an opportunistic pathogen that can cause skin infections, reveals genes that may contribute to the lifestyle and pathogenicity of N. jinanensis . The genome also reveals the biosynthetic capacity of N. jinanensis in producing mycolic acids, siderophores, and other polyketide and nonribosomal peptide-derived secondary metabolites.

scholarly journals Draft Genome Sequence of Thermogemmatispora onikobensis NBRC 111776 T , an Aerial Mycelium- and Spore-Forming Thermophilic Bacterium Belonging to the Class Ktedonobacteria

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Hisayuki Komaki ◽  
Akira Hosoyama ◽  
Shuhei Yabe ◽  
Akira Yokota ◽  
Yoshihito Uchino ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Draft Genome ◽  
Aerial Mycelium ◽  
Gene Clusters ◽  
Thermophilic Bacterium ◽  
Draft Genome Sequence ◽  
Biosynthetic Gene ◽  
Biosynthetic Gene Clusters ◽  
Nonribosomal Peptide

Here, we report the draft genome sequence of Thermogemmatispora onikobensis NBRC 111776 T , an aerial mycelium- and spore-forming thermophilic bacterium belonging to the class Ktedonobacteria . The genome contains five biosynthetic gene clusters coding for secondary metabolites, such as terpene, thiopeptide, lantipeptide, nonribosomal peptide, and lassopeptide, suggesting the potential to produce secondary metabolites.

scholarly journals Draft Genome Sequence of Streptomyces sp. SPMA113, a Prajinamide Producer

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Hisayuki Komaki ◽  
Akira Hosoyama ◽  
Natsuko Ichikawa ◽  
Watanalai Panbangred ◽  
Yasuhiro Igarashi
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Adipocyte Differentiation ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Nonribosomal Peptide ◽  
Streptomyces Sp

We report here the draft genome sequence of Streptomyces sp. SPMA113 isolated from soil in Thailand. This strain produces a new modified peptide, prajinamide, which has adipocyte differentiation activity. The genome harbors at least 30 gene clusters for synthases of polyketide and nonribosomal peptide, suggesting its potential to produce diverse secondary metabolites.

scholarly journals Draft Genome Sequence of Streptomyces sp. TP-A0871, a Producer of Heronamide C

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Hisayuki Komaki ◽  
Natsuko Ichikawa ◽  
Akira Hosoyama ◽  
Nobuyuki Fujita ◽  
Yasuhiro Igarashi
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Draft Genome ◽  
Genome Mining ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Orphan Gene ◽  
Nonribosomal Peptide ◽  
Streptomyces Sp ◽  
Insight Into

Streptomyces sp. TP-A0871 produces the polyene macrolactam heronamide C. Here, we report its draft genome sequence to get insight into heronamide biosynthesis and genome-mining for novel secondary metabolites of polyketide and nonribosomal peptide classes. The genome encodes over nine orphan gene clusters for polyketide and/or nonribosomal peptide syntheses.

scholarly journals Draft Genome Sequence of Saccharomonospora sp. Strain LRS4.154, a Moderately Halophilic Actinobacterium with the Biotechnologically Relevant Polyketide Synthase and Nonribosomal Peptide Synthetase Systems

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Scarlett Alonso-Carmona ◽  
Blanca Vera-Gargallo ◽  
Rafael R. de la Haba ◽  
Antonio Ventosa ◽  
Horacio Sandoval-Trujillo ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Polyketide Synthase ◽  
Draft Genome ◽  
Nonribosomal Peptide Synthetase ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Nonribosomal Peptide ◽  
Moderately Halophilic ◽  
Peptide Synthetase ◽  
Reading Frames

ABSTRACT The draft genome sequence of Saccharomonospora sp. strain LRS4.154, a moderately halophilic actinobacterium, has been determined. The genome has 4,860,108 bp, a G+C content of 71.0%, and 4,525 open reading frames (ORFs). The clusters of PKS and NRPS genes, responsible for the biosynthesis of a large number of biomolecules, were identified in the genome.

scholarly journals Draft Genome Sequence of NDM-1-Producing Leclercia adecarboxylata

2017 ◽  
Vol 5 (17) ◽  
Author(s):  
Yannick Hoyos-Mallecot ◽  
María Dolores Rojo-Martín ◽  
Rémy A. Bonnin ◽  
Elodie Creton ◽  
Jose María Navarro Marí ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Opportunistic Pathogen ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Total Length

ABSTRACT Here, we provide the first draft genome sequence of NDM-1-producing Leclercia adecarboxylata, a human-opportunistic pathogen. The draft genome sequence consists of a total length of 5.13 Mbp, with an average G+C content of 55.2%.

scholarly journals Draft Genome Sequence of the Symbiotically Competent Cyanobacterium Nostoc sp. Strain KVJ20

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Marie-Josée H. Halsør ◽  
Anton Liaimer ◽  
Seila Pandur ◽  
Inger L. U. Ræder ◽  
Arne O. Smalås ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Cell Lines ◽  
Cancer Cell ◽  
Genome Sequence ◽  
Draft Genome ◽  
Cancer Cell Lines ◽  
Draft Genome Sequence ◽  
Inhibitory Effects ◽  
Content Type

Nostoc sp. strain KVJ20 was isolated from the symbiotic organs of the liverwort Blasia pusilla. This cyanobacterium has been shown to have broad symbiotic competence, and bacterial extracts have inhibitory effects on cancer cell lines and microbes. An array of genes for the production of secondary metabolites is present.

scholarly journals Draft Genome Sequence of the Serratia rubidaea CIP 103234 T Reference Strain, a Human-Opportunistic Pathogen

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Rémy A. Bonnin ◽  
Delphine Girlich ◽  
Dilek Imanci ◽  
Laurent Dortet ◽  
Thierry Naas
Keyword(s):  
Genome Sequence ◽  
Reference Strain ◽  
Draft Genome ◽  
Opportunistic Pathogen ◽  
Draft Genome Sequence ◽  
Reference Sequence ◽  
Serratia Rubidaea

We provide here the first genome sequence of a Serratia rubidaea isolate, a human-opportunistic pathogen. This reference sequence will permit a comparison of this species with others of the Serratia genus.

scholarly journals Draft Genome Sequence of Rhodotorula mucilaginosa , an Emergent Opportunistic Pathogen

2015 ◽  
Vol 3 (2) ◽  
Author(s):  
Massimo Deligios ◽  
Cristina Fraumene ◽  
Marcello Abbondio ◽  
Ilaria Mannazzu ◽  
Alessandro Tanca ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Opportunistic Pathogen ◽  
Draft Genome Sequence ◽  
Rhodotorula Mucilaginosa

scholarly journals Draft Genome Sequence of the Antifungal-Producing Plant-Benefiting Bacterium Burkholderia pyrrocinia CH-67

2012 ◽  
Vol 194 (23) ◽  
pp. 6649-6650 ◽  
Author(s):  
Ju Yeon Song ◽  
Min-Jung Kwak ◽  
Kwang Youll Lee ◽  
Hyun Gi Kong ◽  
Byung Kwon Kim ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Plant Growth ◽  
Forest Soil ◽  
Genome Sequence ◽  
Plant Growth Promotion ◽  
Biocontrol Agent ◽  
Growth Promotion ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACTBurkholderia pyrrociniaCH-67 was isolated from forest soil as a biocontrol agent to be utilized in agriculture. Here, we report the 8.05-Mb draft genome sequence of this bacterium. Its genome contains genes involved in biosynthesis of secondary metabolites and plant growth promotion, which may contribute to probiotic effects on plants.

scholarly journals Genome Sequence of the Saprophytic Ascomycete Epicoccumnigrum Strain ICMP 19927, Isolated from New Zealand

2017 ◽  
Vol 5 (24) ◽  
Author(s):  
Mikhail Fokin ◽  
Damien Fleetwood ◽  
Bevan S. Weir ◽  
Silas Villas-Boas
Keyword(s):  
New Zealand ◽  
Secondary Metabolites ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Epicoccum Nigrum ◽  
Mitosporic Fungus

ABSTRACT Epicoccum nigrum is a common mitosporic fungus of the Didymellaceae (Ascomycota) family known for the production of numerous secondary metabolites. Here, we present the 34.7-Mbp draft genome sequence of strain ICMP 19927 assembled from a range of short-insert and long-insert Illumina libraries.

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