scholarly journals Complete Genome Sequence of Papaya Ringspot Virus Isolated from Genetically Modified Papaya in Hainan Island, China

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Guangyuan Zhao ◽  
Pu Yan ◽  
Wentao Shen ◽  
Decai Tuo ◽  
Xiaoying Li ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Isolate ◽  
Genetically Modified ◽  
Hainan Island ◽  
Ringspot Virus ◽  
Papaya Ringspot Virus ◽  
Rt Pcr ◽  
Sequence Identity

The complete genome sequence (10,326 nucleotides) of a papaya ringspot virus isolate infecting genetically modified papaya in Hainan Island of China was determined through reverse transcription (RT)-PCR. The virus shares 92% nucleotide sequence identity with the isolate that is unable to infect PRSV-resistant transgenic papaya.

scholarly journals Complete Genome Sequence of a Papaya ringspot virus Isolate from South Korea That Infects Cucurbita pepo

2017 ◽  
Vol 5 (48) ◽  
Author(s):  
Dasom Baek ◽  
Davaajargal Igori ◽  
Seungmo Lim ◽  
Un Sun Hwang ◽  
Eung Kyoo Choi ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Cucurbita Pepo ◽  
Virus Isolate ◽  
Ringspot Virus ◽  
Full Genome Sequence ◽  
Papaya Ringspot Virus ◽  
Full Genome

ABSTRACT The complete genome sequence of a Papaya ringspot virus (PRSV) isolate from South Korea (SK) infecting squash (Cucurbita pepo) was obtained using paired-end RNA sequencing. A BLASTn search of the PRSV SK isolate full-genome sequence showed nucleotide sequence identity ranging from 81% to 83% with previously reported PRSV isolates (GenBank accession numbers KX655874 and EF017707).

scholarly journals First Complete Genome Sequence of Papaya ringspotvirus-W Isolated from a Gourd in the United States

2017 ◽  
Vol 5 (2) ◽  
Author(s):  
Akhtar Ali
Keyword(s):  
United States ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
The United States ◽  
Ringspot Virus ◽  
Papaya Ringspot Virus ◽  
Commercial Field

ABSTRACT In the United States, the Papaya ringspot virus was first reported from papaya in Florida in 1949. Here, we determined the first complete genome sequence (10,302 nucleotides) of a Papaya ringspot virus-W isolate, which was collected from a commercial field of gourd in Tulsa, OK.

scholarly journals Complete Genome Sequence of Iris Severe Mosaic Virus Isolated in Japan

2019 ◽  
Vol 8 (15) ◽  
Author(s):  
Masanobu Nishikawa ◽  
Ryosuke Tokuda ◽  
Tetsuya Yoshida ◽  
Takamichi Nijo ◽  
Noriko Maruyama ◽  
...  
Keyword(s):  
Mosaic Virus ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Isolate ◽  
Content Type ◽  
Sequence Identity ◽  
First Time

The complete genome sequence of an iris severe mosaic virus isolate (ISMV) from Iris tectorum in Japan was determined for the first time. According to sequence identity analyses, our specimen is closely related to isolates reported from China.

scholarly journals Complete Genome Sequence of a New Strain of Tanay Virus, Isolate YN15_103_01, from Yunnan, China

2018 ◽  
Vol 6 (8) ◽  
Author(s):  
Lu Zhao ◽  
Han Xia ◽  
Yujuan Wang ◽  
Atoni Evans ◽  
Yunzhi Zhang ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Nucleotide Sequence ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Nucleotide Sequence Identity ◽  
Virus Isolate ◽  
The Philippines ◽  
Content Type ◽  
Sequence Identity

ABSTRACT We report here the complete genome sequence of a new strain of Tanay virus, isolate YN15_103_01, which was isolated from Anopheles sinensis mosquitoes caught in China. Sequence analysis showed that it shares a 79% nucleotide sequence identity with the only other previously reported strains of Tanay virus, which were isolated from the Philippines.

scholarly journals Complete Genome Sequence of a Pepper mild mottle virus Isolate from Northeast China

2018 ◽  
Vol 6 (9) ◽  
Author(s):  
Man Yu ◽  
Tao Zhou ◽  
Yuanhua Wu ◽  
Mengnan An
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Northeast China ◽  
Virus Isolate ◽  
Mottle Virus ◽  
Rt Pcr ◽  
Pepper Mild Mottle Virus ◽  
Reverse Transcription Pcr ◽  
Rapid Amplification

ABSTRACT The complete genome sequence of a Pepper mild mottle virus (PMMoV) isolate obtained from Northeast China was determined by reverse transcription-PCR (RT-PCR) and rapid amplification of cDNA ends (RACE). Phylogenetic analysis showed that the virus isolate is closely related to Japanese, Chinese, Spanish, and U.S. isolates.

Complete genome sequence of an isolate of Papaya ringspot virus from India

2006 ◽  
Vol 152 (4) ◽  
pp. 843-845 ◽  
Author(s):  
B. Parameswari ◽  
S. K. Mangrauthia ◽  
S. Praveen ◽  
R. K. Jain
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Ringspot Virus ◽  
Papaya Ringspot Virus

Complete genome sequence of a lettuce chlorosis virus isolate from China and genome recombination/rearrangement analysis

2017 ◽  
Vol 163 (3) ◽  
pp. 751-754 ◽  
Author(s):  
Xiaohui Zhao ◽  
Min Zhu ◽  
Qian Wu ◽  
Jing Zhang ◽  
Yi Xu ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Isolate ◽  
Genome Recombination

scholarly journals Complete Genome Sequence of a Little Cherry Virus-2 Isolate from Sweet Cherry in China

2019 ◽  
Vol 8 (37) ◽  
Author(s):  
Dongzi Zhu ◽  
Jiawei Wang ◽  
Xiaojuan Zong ◽  
Yue Tan ◽  
Hairong Wei ◽  
...  
Keyword(s):  
Phylogenetic Analysis ◽  
Genome Sequence ◽  
Small Rna ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Close Relationships ◽  
Sweet Cherry ◽  
Rt Pcr ◽  
Rna Deep Sequencing ◽  
Small Rna Deep Sequencing

The first complete genome sequence of a little cherry virus-2 (LChV-2-TA) isolate from China was determined using small RNA deep sequencing combined with overlapping reverse transcriptase PCR (RT-PCR). Phylogenetic analysis revealed that LChV-2-TA grouped in a well-supported cluster with members of the genus Ampelovirus with close relationships to previously reported LChV-2 isolates.

scholarly journals Complete Genome Sequence of a Classical Swine Fever Virus Isolate Belonging to New Subgenotype 2.1d from Henan Province, Central China

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Chaochao Lv ◽  
Qingyuan Yang ◽  
Xiaojing Gao ◽  
Yali Yao ◽  
Xiangdong Li ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Classical Swine Fever Virus ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Isolate ◽  
Field Isolate ◽  
Classical Swine Fever ◽  
Glycosylation Site ◽  
Fever Virus ◽  
Central China

We report here the complete genome sequence of HeN1505, a field isolate of classical swine fever virus belonging to the new subgenotype 2.1d. HeN1505 distinguishes itself from other classical swine fever virus (CSFVs) by 1 amino acid substitution in position 159 (threonine by isoleucine), which led to the loss of one N -glycosylation site in the N pro protein.

scholarly journals Whole-Genome Sequence of a Beak and Feather Disease Virus Isolate from a Fledgling Red-Capped Parrot ( Purpureicephalus spurius )

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Shubhagata Das ◽  
Sarker Subir ◽  
Jade K. Forwood ◽  
Seyed A. Ghorashi ◽  
Shane R. Raidal
Keyword(s):  
Disease Virus ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Isolate ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Novel Host ◽  
Feather Disease Virus

The complete genome sequence of beak and feather disease virus (BFDV) from a fledgling red-capped parrot ( Purpureicephalus spurius ) was assembled and characterized. The genome consists of 1,995 nucleotides and encodes two major proteins in opposing directions. This is the first evidence of BFDV infectivity and a complete genome sequence for this novel host.

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