scholarly journals First Complete Genome Sequence of Papaya ringspotvirus-W Isolated from a Gourd in the United States

2017 ◽  
Vol 5 (2) ◽  
Author(s):  
Akhtar Ali
Keyword(s):  
United States ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
The United States ◽  
Ringspot Virus ◽  
Papaya Ringspot Virus ◽  
Commercial Field

ABSTRACT In the United States, the Papaya ringspot virus was first reported from papaya in Florida in 1949. Here, we determined the first complete genome sequence (10,302 nucleotides) of a Papaya ringspot virus-W isolate, which was collected from a commercial field of gourd in Tulsa, OK.

scholarly journals Complete Genome Sequence of Papaya Ringspot Virus Isolated from Genetically Modified Papaya in Hainan Island, China

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
Guangyuan Zhao ◽  
Pu Yan ◽  
Wentao Shen ◽  
Decai Tuo ◽  
Xiaoying Li ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Isolate ◽  
Genetically Modified ◽  
Hainan Island ◽  
Ringspot Virus ◽  
Papaya Ringspot Virus ◽  
Rt Pcr ◽  
Sequence Identity

The complete genome sequence (10,326 nucleotides) of a papaya ringspot virus isolate infecting genetically modified papaya in Hainan Island of China was determined through reverse transcription (RT)-PCR. The virus shares 92% nucleotide sequence identity with the isolate that is unable to infect PRSV-resistant transgenic papaya.

scholarly journals Complete Genome Sequence of a Human Norovirus Strain from the United States Classified as Genotype GII.P6_GII.6

2018 ◽  
Vol 6 (22) ◽  
Author(s):  
Haifeng Chen ◽  
Shiliang Wang ◽  
Weimin Wang
Keyword(s):  
United States ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
The United States ◽  
Virus Genome ◽  
Full Genome Sequence ◽  
Full Genome ◽  
Virus Genotype

ABSTRACT We report here the complete genome sequence of a GII.6 norovirus strain detected in a clinical fecal specimen from the United States. The virus genome has a length of 7,547 bp and a GC content of 50.1%. Complete norovirus genotyping of the full-genome sequence identified the virus genotype as GII.P6_GII.6.

scholarly journals The Complete Genome Sequence of Bacillus anthracis Ames “Ancestor”

2008 ◽  
Vol 191 (1) ◽  
pp. 445-446 ◽  
Author(s):  
Jacques Ravel ◽  
Lingxia Jiang ◽  
Scott T. Stanley ◽  
Mark R. Wilson ◽  
R. Scott Decker ◽  
...  
Keyword(s):  
United States ◽  
Bacillus Anthracis ◽  
Genome Sequence ◽  
Cold Storage ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
The United States ◽  
Pathogenic Bacterium ◽  
The Subject ◽  
The Ideal

ABSTRACT The pathogenic bacterium Bacillus anthracis has become the subject of intense study as a result of its use in a bioterrorism attack in the United States in September and October 2001. Previous studies suggested that B. anthracis Ames Ancestor, the original Ames fully virulent plasmid-containing isolate, was the ideal reference. This study describes the complete genome sequence of that original isolate, derived from a sample kept in cold storage since 1981.

scholarly journals A 25-Year-Old Sample Contributes the Complete Genome Sequence of Avian Coronavirus Vaccine Strain ArkDPI, Reisolated from Commercial Broilers in the United States

2020 ◽  
Vol 9 (9) ◽  
Author(s):  
Iryna V. Goraichuk ◽  
James F. Davis ◽  
Arun B. Kulkarni ◽  
Claudio L. Afonso ◽  
David L. Suarez
Keyword(s):  
United States ◽  
Vaccine Strain ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Broiler Chickens ◽  
The United States

Here, we report the complete genome sequence of Avian coronavirus strain ArkDPI of the GI-9 lineage, isolated from broiler chickens in North Georgia in 1994. This is the complete genome sequence of this vaccine strain, reisolated from broilers in the United States.

scholarly journals Complete Genome Sequence of an Influenza D Virus Strain Identified in a Pig with Subclinical Infection in the United States

2019 ◽  
Vol 8 (4) ◽  
Author(s):  
Peter Thielen ◽  
Jacqueline M. Nolting ◽  
Sarah W. Nelson ◽  
Thomas S. Mehoke ◽  
Craig Howser ◽  
...  
Keyword(s):  
United States ◽  
Respiratory Disease ◽  
Genome Sequence ◽  
Virus Strain ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
The United States ◽  
Viral Reservoir ◽  
Subclinical Infection

Influenza D virus was first described in 2011 from a pig with respiratory disease; however, recent evidence indicates that cattle are the major viral reservoir. Here, we describe the genome sequence of the eighth complete swine-origin influenza D virus deposited into GenBank, D/swine/Kentucky/17TOSU1262/2017, which was collected at a 2017 swine exhibition.

scholarly journals Complete Genome Sequence of Highly Virulent Porcine Reproductive and Respiratory Syndrome Virus Variants That Recently Emerged in the United States: TABLE 1 

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Aspen M. Workman ◽  
Timothy P. L. Smith ◽  
Fernando A. Osorio ◽  
Hiep L. X. Vu
Keyword(s):  
United States ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Severe Disease ◽  
The United States ◽  
Respiratory Syndrome Virus ◽  
Swine Herds ◽  
Highly Virulent ◽  
Viral Isolates

A recent outbreak of particularly virulent disease caused by porcine reproductive and respiratory syndrome virus has occurred in swine herds across the United States. We report here the complete genome sequence of eight viral isolates from four Nebraska herds experiencing an outbreak of severe disease in 2016.

scholarly journals Complete Genome Sequence of a Renamed Isolate, Trichoplusia ni Ascovirus 6b, from the United States

2018 ◽  
Vol 6 (10) ◽  
Author(s):  
Yuan-Yuan Liu ◽  
Wen-Fei Xian ◽  
Jin Xue ◽  
Yong-Lu Wei ◽  
Xiao-Wen Cheng ◽  
...  
Keyword(s):  
United States ◽  
Phylogenetic Relationship ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Trichoplusia Ni ◽  
The United States ◽  
Open Reading Frames ◽  
First Time ◽  
Reading Frames

ABSTRACT The complete genome of Trichoplusia ni ascovirus 6b (TnAV-6b) was sequenced for the first time. The TnAV-6b isolate, which has its closest phylogenetic relationship with the TnAV-6a isolate, has a circular genome of 185,664 bp, with a G+C content of 46.0% and 178 predicted open reading frames.

scholarly journals Complete Genome Sequence of Human Norovirus GII.Pe-GII.4 Sydney from the United States

2017 ◽  
Vol 5 (15) ◽  
Author(s):  
Zhihui Yang ◽  
Jan Vinjé ◽  
Michael Kulka
Keyword(s):  
United States ◽  
Stool Sample ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
The United States ◽  
Cruise Ship ◽  
Human Norovirus

ABSTRACT We report here the first near-complete genome sequence (7,551 nucleotides) of a human norovirus GII.Pe-GII.4 Sydney variant, detected in a stool sample from an outbreak on a cruise ship in 2013.

scholarly journals Complete Genome Sequence of a Papaya ringspot virus Isolate from South Korea That Infects Cucurbita pepo

2017 ◽  
Vol 5 (48) ◽  
Author(s):  
Dasom Baek ◽  
Davaajargal Igori ◽  
Seungmo Lim ◽  
Un Sun Hwang ◽  
Eung Kyoo Choi ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Cucurbita Pepo ◽  
Virus Isolate ◽  
Ringspot Virus ◽  
Full Genome Sequence ◽  
Papaya Ringspot Virus ◽  
Full Genome

ABSTRACT The complete genome sequence of a Papaya ringspot virus (PRSV) isolate from South Korea (SK) infecting squash (Cucurbita pepo) was obtained using paired-end RNA sequencing. A BLASTn search of the PRSV SK isolate full-genome sequence showed nucleotide sequence identity ranging from 81% to 83% with previously reported PRSV isolates (GenBank accession numbers KX655874 and EF017707).

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