scholarly journals Complete Genome Sequence of an African Swine Fever Virus Isolate from Sardinia, Italy

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Fredrik Granberg ◽  
Claudia Torresi ◽  
Annalisa Oggiano ◽  
Maja Malmberg ◽  
Carmen Iscaro ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Isolate ◽  
African Swine Fever Virus ◽  
African Swine Fever ◽  
Fever Virus ◽  
Genomic Regions ◽  
Virus Isolates

Previous genetic characterization of African swine fever virus isolates from the Italian island of Sardinia, where the virus has been present since 1978, has largely been limited to a few selected genomic regions. Here, we report the complete genome sequence of the isolate 47/Ss/08 collected during an outbreak in 2008.

scholarly journals Complete genome sequence of an African swine fever virus (ASFV POL/2015/Podlaskie) determined directly from pig erythrocyte-associated nucleic acid

2018 ◽  
Vol 261 ◽  
pp. 14-16 ◽  
Author(s):  
Ann Sofie Olesen ◽  
Louise Lohse ◽  
Marlene Danner Dalgaard ◽  
Grzegorz Woźniakowski ◽  
Graham J. Belsham ◽  
...  
Keyword(s):  
Nucleic Acid ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
African Swine Fever Virus ◽  
African Swine Fever ◽  
Fever Virus

scholarly journals Genome Sequences of Five African Swine Fever Virus Genotype IX Isolates from Domestic Pigs in Uganda

2018 ◽  
Vol 7 (13) ◽  
Author(s):  
Charles Masembe ◽  
Vattipally B. Sreenu ◽  
Ana Da Silva Filipe ◽  
Gavin S. Wilkie ◽  
Peter Ogweng ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome ◽  
African Swine Fever Virus ◽  
African Swine Fever ◽  
Fever Virus ◽  
Genome Sequences ◽  
Virus Genotype ◽  
Domestic Pigs ◽  
Genotype Ix ◽  
Virus Isolates

Complete genome sequences of five African swine fever virus isolates were determined directly from clinical material obtained from domestic pigs in Uganda. Four sequences were essentially identical to each other, and all were closely related to the only known genome sequence of p72 genotype IX.

scholarly journals Complete Genome Sequence of African Swine Fever Virus Isolated from a Domestic Pig in Timor-Leste, 2019

2021 ◽  
Vol 10 (26) ◽  
Author(s):  
Patrick Mileto ◽  
Felisiano da Conceição ◽  
Vittoria Stevens ◽  
David Cummins ◽  
Andrea Certoma ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
African Swine Fever Virus ◽  
African Swine Fever ◽  
Fever Virus ◽  
Domestic Pig ◽  
Oxford Nanopore ◽  
Timor Leste ◽  
Long Read

Here, we report the complete genome sequence of the African swine fever virus (ASFV) isolate ASFV/Timor-Leste/2019/1, isolated from a domestic pig during the first outbreak of ASF in Timor-Leste in 2019. Using target enrichment short-read Illumina data combined with long-read Oxford Nanopore data, we assembled a full-length genome sequence of 192,237 bp.

scholarly journals Complete Genome Sequence of a Virulent African Swine Fever Virus from a Domestic Pig in Ukraine

2019 ◽  
Vol 8 (42) ◽  
Author(s):  
Ganna Kovalenko ◽  
Anne-Lise Ducluzeau ◽  
Liudmyla Ishchenko ◽  
Mykola Sushko ◽  
Maryna Sapachova ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
African Swine Fever Virus ◽  
African Swine Fever ◽  
Fever Virus ◽  
Base Pairs ◽  
Domestic Pig ◽  
Long Read ◽  
Full Length Genome

Here, we report the complete genome sequence of an African swine fever (ASF) virus (ASFV/Kyiv/2016/131) isolated from the spleen of a domestic pig in Ukraine with a lethal case of African swine fever. Using only long-read Nanopore sequences, we assembled a full-length genome of 191,911 base pairs in a single contig.

scholarly journals Complete Genome Sequence of a Classical Swine Fever Virus Isolate Belonging to New Subgenotype 2.1d from Henan Province, Central China

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Chaochao Lv ◽  
Qingyuan Yang ◽  
Xiaojing Gao ◽  
Yali Yao ◽  
Xiangdong Li ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Classical Swine Fever Virus ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Isolate ◽  
Field Isolate ◽  
Classical Swine Fever ◽  
Glycosylation Site ◽  
Fever Virus ◽  
Central China

We report here the complete genome sequence of HeN1505, a field isolate of classical swine fever virus belonging to the new subgenotype 2.1d. HeN1505 distinguishes itself from other classical swine fever virus (CSFVs) by 1 amino acid substitution in position 159 (threonine by isoleucine), which led to the loss of one N -glycosylation site in the N pro protein.

Comparative analysis of the complete genome sequences of Kenyan African swine fever virus isolates within p72 genotypes IX and X

Virus Genes ◽  
2015 ◽  
Vol 50 (2) ◽  
pp. 303-309 ◽  
Author(s):  
Richard P. Bishop ◽  
Clare Fleischauer ◽  
Etienne P. de Villiers ◽  
Edward A. Okoth ◽  
Marisa Arias ◽  
...  
Keyword(s):  
Comparative Analysis ◽  
Complete Genome ◽  
African Swine Fever Virus ◽  
African Swine Fever ◽  
Fever Virus ◽  
Genome Sequences ◽  
Virus Isolates

scholarly journals First Complete Genome Sequence of a Subgenotype Vd Newcastle Disease Virus Isolate

2019 ◽  
Vol 8 (27) ◽  
Author(s):  
Iryna V. Goraichuk ◽  
Peter L. M. Msoffe ◽  
Gaspar H. Chiwanga ◽  
Kiril M. Dimitrov ◽  
Claudio L. Afonso ◽  
...  
Keyword(s):  
Newcastle Disease Virus ◽  
Disease Virus ◽  
Genome Sequence ◽  
Newcastle Disease ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Isolate ◽  
Newcastle Disease Virus Isolate ◽  
Live Bird

ABSTRACTA Newcastle disease virus was isolated from a chicken from a live bird market in the Mbeya region of Tanzania. Complete genome characterization of the isolate identified it as a member of subgenotype Vd. This is the first complete genome sequence of this subgenotype.

scholarly journals Coding-Complete Genome Sequence of an African Swine Fever Virus Strain Liv13/33 Isolate from Experimental Transmission between Pigs and Ornithodoros moubata Ticks

2020 ◽  
Vol 9 (17) ◽  
Author(s):  
Amélie Chastagner ◽  
Rémi Pereira de Oliveira ◽  
Evelyne Hutet ◽  
Mireille Le Dimna ◽  
Frédéric Paboeuf ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Virus Strain ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
African Swine Fever Virus ◽  
African Swine Fever ◽  
Genotype I ◽  
Experimental Transmission ◽  
Content Type ◽  
Ornithodoros Moubata

Here, we report the coding-complete genome sequence of African swine fever (ASF) virus strain Liv13/33, isolated from experimentally infected pigs and Ornithodoros moubata ticks. The 11 sequences that we obtained harbored no notable differences to each other, and all of them were closely related to the genome sequence of the Mkuzi 1979 strain of genotype I.

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