scholarly journals Complete Genome Sequence of Bacillus velezensis L-1, Which Has Antagonistic Activity against Pear Diseases

2017 ◽  
Vol 5 (48) ◽  
Author(s):  
Pingping Sun ◽  
Jianchao Cui ◽  
Xiaohui Jia ◽  
Wenhui Wang

ABSTRACT Bacillus velezensis L-1 is an effective biocontrol agent against pear diseases. Here, we report the complete genome sequence of B. velezensis L-1 in which clusters related to the biosynthesis of secondary metabolites were predicted. This genome provides insights into the possible biocontrol mechanisms and furthers application of this specific bacterium.

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Young Soo Kim ◽  
Younmi Lee ◽  
Wonsu Cheon ◽  
Jungwook Park ◽  
Hyeok-Tae Kwon ◽  
...  

AbstractBacillus genus produces several secondary metabolites with biocontrol ability against various phytopathogens. Bacillus velezensis AK-0 (AK-0), an antagonistic strain isolated from Korean ginseng rhizospheric soil, was found to exhibit antagonistic activity against several phytopathogens. To further display the genetic mechanism of the biocontrol traits of AK-0, we report the complete genome sequence of AK-0 and compared it with complete genome sequences of closely related strains. We report the biocontrol activity of AK-0 against apple bitter rot caused by Colletotrichum gloeosporioides, which could lead to commercialization of this strain as a microbial biopesticide in Korea. To retain its biocontrol efficacy for a longer period, AK-0 has been formulated with ingredients for commercialization, named AK-0 product formulation (AK-0PF). AK-0PF played a role in the suppression of the mycelial growth of the fungicide-resistant pathogen C. gloeosporioides YCHH4 at a greater level than the non-treated control. Moreover, AK-0PF exhibited greater disease suppression of bitter rot in matured under field conditions. Here, we report the complete genome sequence of the AK-0 strain, which has a 3,969,429 bp circular chromosome with 3808 genes and a G+C content of 46.5%. The genome sequence of AK-0 provides a greater understanding of the Bacillus species, which displays biocontrol activity via secondary metabolites. The genome has eight potential secondary metabolite biosynthetic clusters, among which, ituD and bacD genes were expressed at a greater level than other genes. This work provides a better understanding of the strain AK-0, as an effective biocontrol agent (BCA) against phytopathogens, including bitter rot in apple.


2020 ◽  
Vol 9 (24) ◽  
Author(s):  
Man-Seok Bang ◽  
Hee-Won Jeong ◽  
Yea-Jin Lee ◽  
Sang-Cheol Lee ◽  
Gi Soo Lee ◽  
...  

ABSTRACT In the present work, we report the complete genome sequence of Bacillus velezensis DKU_NT_04, isolated from cheonggukjang, which is a traditional Korean fermented soybean paste. The final genome assembly consists of a 4.328-Mbp chromosome with 4,134 coding sequences and a G+C content of 45.21%.


2018 ◽  
Vol 278 ◽  
pp. 10-19 ◽  
Author(s):  
Caroline Pandin ◽  
Dominique Le Coq ◽  
Julien Deschamps ◽  
Régis Védie ◽  
Thierry Rousseau ◽  
...  

2020 ◽  
Vol 9 (20) ◽  
Author(s):  
Priscilla P. Hempel ◽  
Mengyin Yao ◽  
Sarah Yannarell ◽  
Olga Shevchenko ◽  
Franziska Vogt ◽  
...  

Here, we report the complete genome sequence of Bacillus velezensis strain S4, which was isolated from biochar-amended agricultural soil collected in Smyrna, Delaware. The genome is 4.07 Mbp, encodes 3,918 predicted proteins, and has a GC content of 46.4%.


2019 ◽  
Vol 8 (38) ◽  
Author(s):  
Jianghong Zhou ◽  
Fei Xia ◽  
Shaochen Che ◽  
Li Zhong ◽  
Guofeng Zhang

Pantoea sp. strain CCBC3-3-1, having antagonistic activity against Verticillium dahlia, was isolated from Cotinus coggygria. We report the complete genome sequence of this strain determined by PacBio single-molecule real-time (SMRT) technology. The total genome size of CCBC3-3-1 is 5,159,767 bp, with a G+C content of 48.08%.


2018 ◽  
Vol 6 (10) ◽  
Author(s):  
Cecilia Miccoli ◽  
Davide Palmieri ◽  
Filippo De Curtis ◽  
Giuseppe Lima ◽  
Giuseppe Ianiri ◽  
...  

ABSTRACTRhodotorula kratochvilovaestrain LS11 is a biocontrol agent (BCA) selected for its antagonistic activity against several plant pathogens both in the field and postharvest. Genome assembly includes 62 contigs for a total of 22.56 Mbp and a G+C content of 66.6%. Genome annotation predicts 7,642 protein-encoding genes.


2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Ali Al-Fendi ◽  
Rafidah Hanim Shueb ◽  
Phiaw Chong Foo ◽  
Manickam Ravichandran ◽  
Chan Yean Yean

ABSTRACT The complete genome sequence of bacteriophage VPUSM 8 against O1 El Tor Inaba Vibrio cholerae is reported here. The isolated VPUSM 8 has potential use in future phage therapy or as a biocontrol agent for the prevention and treatment of cholera.


2020 ◽  
Vol 9 (36) ◽  
Author(s):  
Rui-Liang Sun ◽  
Yu-Ling Jing ◽  
Rong-Jun Guo ◽  
Shi-Dong Li

ABSTRACT The genome sequence of Rhizobium sp. strain 76, a bacterium isolated from the hyphosphere of Fusarium oxysporum f. sp. cucumerinum, is reported here. Genome sequencing and assembly yielded 5,375,961 bases with a 59.14% G+C content, comprising two chromosomes and one plasmid.


2017 ◽  
Vol 5 (42) ◽  
Author(s):  
Mustafa Yesil ◽  
En Huang ◽  
Xu Yang ◽  
Ahmed E. Yousef

ABSTRACT Bacteriophage OSYSP is a new anti-Escherichia coli O157:H7 phage isolated from municipal wastewater in Ohio. OSYSP is potent against enterohemorrhagic E. coli and is a candidate biocontrol agent for food and therapeutic applications. In this paper, we present the important genetic features of this phage based on its complete genome sequence.


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