scholarly journals Draft Genome Sequence of the Thermotolerant Cyanobacterium Desertifilum sp. IPPAS B-1220

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Kirill S. Mironov ◽  
Maria A. Sinetova ◽  
Kenzhegul Bolatkhan ◽  
Bolatkhan K. Zayadan ◽  
Vera V. Ustinova ◽  
...  
Keyword(s):  
Bioactive Compounds ◽  
Genome Sequence ◽  
Draft Genome ◽  
Genome Mining ◽  
Draft Genome Sequence ◽  
Nonribosomal Peptides ◽  
Filamentous Cyanobacterium ◽  
Medical Importance

Here, we report the draft genome of the filamentous cyanobacterium Desertifilum sp. strain IPPAS B-1220, isolated from Lake Shar-Nuur, Mongolia. The genome of 6.1 Mb codes for 5,113 genes. Genome mining revealed 10 clusters for the synthesis of bioactive compounds (nonribosomal peptides, polyketides, bacteriocins, and lantipeptides) with potential biotechnological or medical importance.

scholarly journals Draft Genome Sequences of Fungus Aspergillus calidoustus

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Fabian Horn ◽  
Jörg Linde ◽  
Derek J. Mattern ◽  
Grit Walther ◽  
Reinhard Guthke ◽  
...  
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Functional Annotation ◽  
Draft Genome ◽  
Genome Mining ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Genome Sequences

Here, we report the draft genome sequence of Aspergillus calidoustus (strain SF006504) . The functional annotation of A. calidoustus predicts a relatively large number of secondary metabolite gene clusters. The presented genome sequence builds the basis for further genome mining.

scholarly journals Draft Genome Sequence of Putative 2-Methylisoborneol-Producing Pseudanabaena yagii Strain GIHE-NHR1, Isolated from the North Han River in South Korea

2020 ◽  
Vol 9 (27) ◽  
Author(s):  
Ju-Yong Jeong ◽  
Sang-Hoon Lee ◽  
Mi-Ra Yun ◽  
Seung-Eun Oh ◽  
Tae-Hwa Kim ◽  
...  
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Genome Analysis ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Filamentous Cyanobacterium ◽  
Comparative Genome Analysis ◽  
Han River ◽  
The North ◽  
Genome Information

ABSTRACT The draft genome sequence of Pseudanabaena yagii GIHE-NHR1, a filamentous cyanobacterium, is reported here. Comparative genome analysis suggests that this strain can produce an odor-causing compound (2-methylisoborneol) in water. The genome information is expected to improve the understanding of the putative 2-methylisoborneol production by the bacterium.

scholarly journals Draft Genome Sequence of Nonomuraea sp. Strain C10, a Producer of Brartemicin, Isolated from a Mud Dauber Wasp Nest in Nepal

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Niraj Aryal ◽  
Saefuddin Aziz ◽  
Prajwal Rajbhandari ◽  
Harald Gross
Keyword(s):  
Secondary Metabolites ◽  
Natural Product ◽  
Genome Sequence ◽  
Draft Genome ◽  
Genome Mining ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Insight Into

Nonomuraea sp. strain C10 produces the cytotoxic natural product brartemicin. Here, we report its draft genome sequence to get insight into brartemicin biosynthesis and to enable genome mining for novel secondary metabolites.

scholarly journals Draft Genome Sequence of Flavobacterium sp. Strain TAB 87, Able To Inhibit the Growth of Cystic Fibrosis Bacterial Pathogens Belonging to the Burkholderia cepacia Complex

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Luana Presta ◽  
Ilaria Inzucchi ◽  
Emanuele Bosi ◽  
Marco Fondi ◽  
Elena Perrin ◽  
...  
Keyword(s):  
Cystic Fibrosis ◽  
Antibiotic Resistance ◽  
Comparative Genomics ◽  
Bioactive Compounds ◽  
Genome Sequence ◽  
Burkholderia Cepacia ◽  
Draft Genome ◽  
Burkholderia Cepacia Complex ◽  
Draft Genome Sequence ◽  
Antarctic Seawater

We report here the draft genome sequence of the Flavobacterium sp. TAB 87 strain, isolated from Antarctic seawater during a summer campaign near the French Antarctic station Dumont d’Urville (60°40′S, 40°01′E). It will allow for comparative genomics and the fulfillment of both fundamental and application-oriented investigations. It allowed the recognition of genes associated with the production of bioactive compounds and antibiotic resistance.

scholarly journals Draft Genome Sequence of Streptomyces sp. Strain C8S0, Isolated from a Highly Oligotrophic Sediment

2020 ◽  
Vol 9 (14) ◽  
Author(s):  
S. Gallegos-Lopez ◽  
P. M. Mejia-Ponce ◽  
L. A. Gonzalez-Salazar ◽  
L. Rodriguez-Orduña ◽  
V. Souza-Saldivar ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Bioactive Metabolites ◽  
Nonribosomal Peptides ◽  
Biosynthetic Gene ◽  
Biosynthetic Gene Clusters ◽  
Cuatro Ciénegas ◽  
Cuatro Ciénegas Basin

Streptomyces spp. are prolific bacteria producing bioactive metabolites. We present the draft genome sequence of Streptomyces sp. strain C8S0, which was isolated from a highly oligotrophic sediment from the Cuatro Cienegas Basin (Mexico). The whole-genome assembly comprised 6,898,902 bp, with 18 biosynthetic gene clusters, including those for nonconventional terpenes, nonribosomal peptides, and polyketides.

scholarly journals Draft Genome Sequences of the Antimicrobial Producers Pseudomonas sp. TAA207 and Pseudomonas sp. TAD18 Isolated from Antarctic Sediments

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Luana Presta ◽  
Ilaria Inzucchi ◽  
Emanuele Bosi ◽  
Marco Fondi ◽  
Elena Perrin ◽  
...  
Keyword(s):  
Antibiotic Resistance ◽  
Comparative Genomics ◽  
Bioactive Compounds ◽  
Genome Sequence ◽  
Draft Genome ◽  
Coastal Areas ◽  
Draft Genome Sequence ◽  
Pseudomonas Sp ◽  
Genome Sequences ◽  
Terra Nova Bay

We report here the draft genome sequence of the Pseudomonas sp. TAA207 and Pseudomonas sp. TAD18 strains, isolated from Antarctic sediments during a summer campaign near coastal areas of Terra Nova Bay (Antarctica). Genome sequence knowledge allowed the identification of genes associated with the production of bioactive compounds and antibiotic resistance. Furthermore, it will be instrumental for comparative genomics and the fulfillment of both basic and application-oriented investigations.

scholarly journals Draft Genome Sequence of Pseudomonas sp. EpS/L25, Isolated from the Medicinal Plant Echinacea purpurea and Able To Synthesize Antimicrobial Compounds

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Luana Presta ◽  
Emanuele Bosi ◽  
Marco Fondi ◽  
Isabel Maida ◽  
Elena Perrin ◽  
...  
Keyword(s):  
Antibiotic Resistance ◽  
Comparative Genomics ◽  
Medicinal Plant ◽  
Bioactive Compounds ◽  
Genome Sequence ◽  
Draft Genome ◽  
Echinacea Purpurea ◽  
Draft Genome Sequence ◽  
Antimicrobial Compounds ◽  
Pseudomonas Sp

We announce here the draft genome sequence of Pseudomonas sp. strain EpS/L25, isolated from the stem/leaves of the medicinal plant Echinacea purpurea . This genome will allow for comparative genomics in order to identify genes associated with the production of bioactive compounds and antibiotic resistance.

scholarly journals Draft Genome Sequence of the Phototropic Cyanobacterium Rivularia sp. Strain IAM M-261

2021 ◽  
Vol 10 (39) ◽  
Author(s):  
Yuu Hirose ◽  
Mitsunori Katayama
Keyword(s):  
Visible Light ◽  
Genome Sequence ◽  
Molecular Basis ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Filamentous Cyanobacterium ◽  
Apical Polarity

Rivularia sp. strain IAM M-261 is a filamentous cyanobacterium with tapering morphology and basal-apical polarity. The apical filament of this cyanobacterium exhibits positive phototropism toward visible light. To elucidate the molecular basis for this phototropism, we determined the draft genome sequence of this strain.

scholarly journals Draft Genome Sequence of Streptomyces hygroscopicus subsp. hygroscopicus NBRC 16556

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Hisayuki Komaki ◽  
Natsuko Ichikawa ◽  
Akio Oguchi ◽  
Moriyuki Hamada ◽  
Tomohiko Tamura ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Draft Genome ◽  
Genome Mining ◽  
Culture Collection ◽  
Streptomyces Hygroscopicus ◽  
Draft Genome Sequence ◽  
Nucleotide Identity ◽  
Taxonomic Identification ◽  
Average Nucleotide Identity

Here, we report the draft genome sequence of strain NBRC 16556, deposited as Streptomyces hygroscopicus subsp. hygroscopicus into the NBRC culture collection. An average nucleotide identity analysis confirmed that the taxonomic identification is correct. The genome sequence will serve as a valuable reference for genome mining to search new secondary metabolites.

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