scholarly journals Whole-Genome Sequence of Streptococcus parauberis Strain SP-llh, Isolated from Cows with Mastitis in Western China

2017 ◽  
Vol 5 (2) ◽  
Author(s):  
Longhai Liu ◽  
Feng Yang ◽  
Xinpu Li ◽  
Jinyin Luo ◽  
Zhe Zhang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Western China ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Streptococcus Parauberis ◽  
Large Contigs

ABSTRACT Streptococcus parauberis strain SP-llh was isolated from cows with mastitis in western China in 2015. The 2,522,235-bp genome sequence consists of 46 large contigs in 14 scaffolds and contains 2,620 predicted protein-coding genes, with a G+C content of 35.3%.

scholarly journals Complete Genome Sequence of Staphylococcus epidermidis 1457

2017 ◽  
Vol 5 (22) ◽  
Author(s):  
Madeline R. Galac ◽  
Jason Stam ◽  
Rosslyn Maybank ◽  
Mary Hinkle ◽  
Dietrich Mack ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Staphylococcus Epidermidis ◽  
Complete Genome Sequence ◽  
Genetic Manipulation ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Related Research ◽  
Protein Coding Genes

ABSTRACT Staphylococcus epidermidis 1457 is a frequently utilized strain that is amenable to genetic manipulation and has been widely used for biofilm-related research. We report here the whole-genome sequence of this strain, which encodes 2,277 protein-coding genes and 81 RNAs within its 2.4-Mb genome and plasmid.

scholarly journals Whole-Genome Sequence of Haloimpatiens lingqiaonensis Strain P8956

2019 ◽  
Vol 8 (43) ◽  
Author(s):  
Hussein Anani ◽  
Didier Raoult ◽  
Pierre-Edouard Fournier
Keyword(s):  
Genome Sequence ◽  
Bacterial Isolate ◽  
Paper Mill ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Paper Mill Wastewater ◽  
Rna Genes

In 2016, Haloimpatiens lingqiaonensis was described as a bacterial isolate from paper mill wastewater. Previously, no whole-genome sequence was available for this microorganism. Whole-genome sequencing of strain P8956 yielded a 3,295,388-bp genome with a 30.7% G+C content, 2,917 protein-coding genes, and 95 predicted RNA genes.

scholarly journals Whole-Genome Sequence of Lactobacillus acidophilus PNW3, Isolated from Weaned Piglets of the Indigenous South African Windsnyer Pig Breed

2019 ◽  
Vol 8 (25) ◽  
Author(s):  
Kazeem A. Alayande ◽  
Olayinka A. Aiyegoro ◽  
Collins N. Ateba
Keyword(s):  
South African ◽  
Genome Sequence ◽  
Lactobacillus Acidophilus ◽  
Draft Genome ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Weaned Piglets ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

A draft genome sequence of Lactobacillus acidophilus PNW3 is reported. The genome assembly is 1,857,655 bp long in 25 contigs with an N 50 value of 230,557 bp and a G+C content of 34.6%. The total number of predicted protein-coding genes is 1,776, with 58 predicted RNAs and 42 predicted pseudogenes.

scholarly journals Complete Genome Sequence of Staphylococcus epidermidis CSF41498

2019 ◽  
Vol 8 (2) ◽  
Author(s):  
M. R. Galac ◽  
Tra-My Hoang ◽  
Ana C. Ong ◽  
M. Hinkle ◽  
J. P. O’Gara ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Staphylococcus Epidermidis ◽  
Complete Genome Sequence ◽  
Biofilm Formation ◽  
Genetic Manipulation ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

Staphylococcus epidermidis CSF41498 is amenable to genetic manipulation and has been used to study mechanisms of biofilm formation. We report here the whole-genome sequence of this strain, which contains 2,427 protein-coding genes and 82 RNAs within its 2,481,008-bp-long genome, as well as three plasmids.

scholarly journals Whole-Genome Sequence of Corynebacterium xerosis Strain GS1, Isolated from Yak in Gansu Province, China

2019 ◽  
Vol 8 (37) ◽  
Author(s):  
Fengqin Wen ◽  
Xiaoyong Xing ◽  
Shijun Bao ◽  
Yonghao Hu ◽  
Bao-cheng Hao
Keyword(s):  
Genome Sequence ◽  
Liver Lesion ◽  
Gansu Province ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

We report here the isolation, sequencing of the complete closed genome, and annotation of Corynebacterium xerosis strain GS1. This strain was isolated from the liver lesion of a yak in Gansu Province, China. The genome consists of one chromosome with 2,738,835 bp and comprises 2,304 protein-coding genes.

scholarly journals Draft Genome Sequence of Salirhabdus euzebyi Strain Q1438

2020 ◽  
Vol 9 (18) ◽  
Author(s):  
Rita Zgheib ◽  
Hussein Anani ◽  
Didier Raoult ◽  
Pierre-Edouard Fournier
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Bacterial Isolate ◽  
Draft Genome ◽  
Sea Salt ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

In 2007, Salirhabdus euzebyi was first described as a bacterial isolate from a sea salt evaporation pond. As no genome sequence was previously available for this species, we performed whole-genome sequencing. The chromosome of strain Q1438 was 3,784,443 bp long with 36% G+C content, 3,830 protein-coding genes, and 74 RNA genes.

scholarly journals Whole-Genome Sequence of the Fruiting Myxobacterium Cystobacter fuscus DSM 52655

2017 ◽  
Vol 5 (43) ◽  
Author(s):  
Anke Treuner-Lange ◽  
Marc Bruckskotten ◽  
Oliver Rupp ◽  
Alexander Goesmann ◽  
Lotte Søgaard-Andersen
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Fruiting Body Formation ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Body Formation ◽  
Putative Protein

ABSTRACT Among myxobacteria, the genus Cystobacter is known not only for fruiting body formation but also for formation of secondary metabolites, such as cystobactamids and cystothiazols. Here, we present the complete genome sequence of the Cystobacter fuscus strain DSM 52655, which comprises 12,349,744 bp and 9,836 putative protein-coding sequences.

scholarly journals Whole-Genome Sequence ofCorynebacterium auriscanisStrain CIP 106629 Isolated from a Dog with Bilateral Otitis from the United Kingdom

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Sandeep Tiwari ◽  
Syed Babar Jamal ◽  
Leticia Castro Oliveira ◽  
Dominique Clermont ◽  
Chantal Bizet ◽  
...  
Keyword(s):  
United Kingdom ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Protein Coding Genes ◽  
The United Kingdom ◽  
Circular Genome

In this work, we describe a set of features ofCorynebacterium auriscanisCIP 106629 and details of the draft genome sequence and annotation. The genome comprises a 2.5-Mbp-long single circular genome with 1,797 protein-coding genes, 5 rRNA, 50 tRNA, and 403 pseudogenes, with a G+C content of 58.50%.

scholarly journals Whole-Genome Sequence of Mycobacterium ulcerans CSURP7741, a French Guianan Clinical Isolate

2019 ◽  
Vol 8 (29) ◽  
Author(s):  
Jamal Saad ◽  
Marine Combe ◽  
Nassim Hammoudi ◽  
Pierre Couppié ◽  
Romain Blaizot ◽  
...  
Keyword(s):  
Clinical Isolate ◽  
Genome Sequence ◽  
Buruli Ulcer ◽  
Gc Content ◽  
Mycobacterium Ulcerans ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Rna Genes

Combined Nanopore and Illumina whole-genome sequencing of a French Guianan Mycobacterium ulcerans (Buruli ulcer agent) clinical isolate yielded a 5.12-Mbp genome with a 65.5% GC content, 5,215 protein-coding genes, and 51 predicted RNA genes. This publicly available M. ulcerans whole-genome sequence from a strain isolated in South America is closely related to M. ulcerans subsp. liflandii.

scholarly journals Whole-Genome Sequence of Rummeliibacillus stabekisii Strain PP9 Isolated from Antarctic Soil

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Fábio Faria da Mota ◽  
Renata Estebanez Vollú ◽  
Diogo Jurelevicius ◽  
Lucy Seldin
Keyword(s):  
Soil Sample ◽  
Genome Sequence ◽  
Noncoding Rnas ◽  
Whole Genome Sequence ◽  
Trna Genes ◽  
Whole Genome ◽  
Antarctic Soil ◽  
Circular Chromosome ◽  
Protein Coding ◽  
Protein Coding Genes

The whole genome of Rummeliibacillus stabekisii PP9, isolated from a soil sample from Antarctica, consists of a circular chromosome of 3,412,092 bp and a circular plasmid of 8,647 bp, with 3,244 protein-coding genes, 12 copies of the 16S-23S-5S rRNA operon, 101 tRNA genes, and 6 noncoding RNAs (ncRNAs).

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