scholarly journals Whole-Genome Sequence of Haloimpatiens lingqiaonensis Strain P8956

2019 ◽  
Vol 8 (43) ◽  
Author(s):  
Hussein Anani ◽  
Didier Raoult ◽  
Pierre-Edouard Fournier
Keyword(s):  
Genome Sequence ◽  
Bacterial Isolate ◽  
Paper Mill ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Paper Mill Wastewater ◽  
Rna Genes

In 2016, Haloimpatiens lingqiaonensis was described as a bacterial isolate from paper mill wastewater. Previously, no whole-genome sequence was available for this microorganism. Whole-genome sequencing of strain P8956 yielded a 3,295,388-bp genome with a 30.7% G+C content, 2,917 protein-coding genes, and 95 predicted RNA genes.

scholarly journals Draft Genome Sequence of Salirhabdus euzebyi Strain Q1438

2020 ◽  
Vol 9 (18) ◽  
Author(s):  
Rita Zgheib ◽  
Hussein Anani ◽  
Didier Raoult ◽  
Pierre-Edouard Fournier
Keyword(s):  
Genome Sequencing ◽  
Genome Sequence ◽  
Bacterial Isolate ◽  
Draft Genome ◽  
Sea Salt ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

In 2007, Salirhabdus euzebyi was first described as a bacterial isolate from a sea salt evaporation pond. As no genome sequence was previously available for this species, we performed whole-genome sequencing. The chromosome of strain Q1438 was 3,784,443 bp long with 36% G+C content, 3,830 protein-coding genes, and 74 RNA genes.

scholarly journals Whole-Genome Sequence of Mycobacterium ulcerans CSURP7741, a French Guianan Clinical Isolate

2019 ◽  
Vol 8 (29) ◽  
Author(s):  
Jamal Saad ◽  
Marine Combe ◽  
Nassim Hammoudi ◽  
Pierre Couppié ◽  
Romain Blaizot ◽  
...  
Keyword(s):  
Clinical Isolate ◽  
Genome Sequence ◽  
Buruli Ulcer ◽  
Gc Content ◽  
Mycobacterium Ulcerans ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Rna Genes

Combined Nanopore and Illumina whole-genome sequencing of a French Guianan Mycobacterium ulcerans (Buruli ulcer agent) clinical isolate yielded a 5.12-Mbp genome with a 65.5% GC content, 5,215 protein-coding genes, and 51 predicted RNA genes. This publicly available M. ulcerans whole-genome sequence from a strain isolated in South America is closely related to M. ulcerans subsp. liflandii.

scholarly journals Complete Genome Sequence of Staphylococcus epidermidis 1457

2017 ◽  
Vol 5 (22) ◽  
Author(s):  
Madeline R. Galac ◽  
Jason Stam ◽  
Rosslyn Maybank ◽  
Mary Hinkle ◽  
Dietrich Mack ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Staphylococcus Epidermidis ◽  
Complete Genome Sequence ◽  
Genetic Manipulation ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Related Research ◽  
Protein Coding Genes

ABSTRACT Staphylococcus epidermidis 1457 is a frequently utilized strain that is amenable to genetic manipulation and has been widely used for biofilm-related research. We report here the whole-genome sequence of this strain, which encodes 2,277 protein-coding genes and 81 RNAs within its 2.4-Mb genome and plasmid.

scholarly journals Whole-Genome Sequence of French Clinical Olivibacter jilunii Strain P8502

2019 ◽  
Vol 8 (31) ◽  
Author(s):  
Hussein Anani ◽  
May Khodor ◽  
Didier Raoult ◽  
Pierre-Edouard Fournier
Keyword(s):  
Genome Sequencing ◽  
Rectal Swab ◽  
Bacterial Species ◽  
Whole Genome Sequence ◽  
Clinical Strain ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

In 2013, Olivibacter jilunii was reported as a bacterial species isolated from contaminated soil. In 2018, a clinical strain from the same species was isolated from the rectal swab of a Hajj pilgrim. Genome sequencing yielded 6,704,032 bp, with 41.2% G+C content, 5,406 protein-coding genes, and 54 predicted RNA genes in strain P8502.

scholarly journals Whole-Genome Sequence of Streptococcus parauberis Strain SP-llh, Isolated from Cows with Mastitis in Western China

2017 ◽  
Vol 5 (2) ◽  
Author(s):  
Longhai Liu ◽  
Feng Yang ◽  
Xinpu Li ◽  
Jinyin Luo ◽  
Zhe Zhang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Western China ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Streptococcus Parauberis ◽  
Large Contigs

ABSTRACT Streptococcus parauberis strain SP-llh was isolated from cows with mastitis in western China in 2015. The 2,522,235-bp genome sequence consists of 46 large contigs in 14 scaffolds and contains 2,620 predicted protein-coding genes, with a G+C content of 35.3%.

scholarly journals Whole-Genome Sequence of Lactobacillus acidophilus PNW3, Isolated from Weaned Piglets of the Indigenous South African Windsnyer Pig Breed

2019 ◽  
Vol 8 (25) ◽  
Author(s):  
Kazeem A. Alayande ◽  
Olayinka A. Aiyegoro ◽  
Collins N. Ateba
Keyword(s):  
South African ◽  
Genome Sequence ◽  
Lactobacillus Acidophilus ◽  
Draft Genome ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Weaned Piglets ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

A draft genome sequence of Lactobacillus acidophilus PNW3 is reported. The genome assembly is 1,857,655 bp long in 25 contigs with an N 50 value of 230,557 bp and a G+C content of 34.6%. The total number of predicted protein-coding genes is 1,776, with 58 predicted RNAs and 42 predicted pseudogenes.

scholarly journals Complete Genome Sequence of Staphylococcus epidermidis CSF41498

2019 ◽  
Vol 8 (2) ◽  
Author(s):  
M. R. Galac ◽  
Tra-My Hoang ◽  
Ana C. Ong ◽  
M. Hinkle ◽  
J. P. O’Gara ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Staphylococcus Epidermidis ◽  
Complete Genome Sequence ◽  
Biofilm Formation ◽  
Genetic Manipulation ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

Staphylococcus epidermidis CSF41498 is amenable to genetic manipulation and has been used to study mechanisms of biofilm formation. We report here the whole-genome sequence of this strain, which contains 2,427 protein-coding genes and 82 RNAs within its 2,481,008-bp-long genome, as well as three plasmids.

scholarly journals Whole-Genome Sequence of Corynebacterium xerosis Strain GS1, Isolated from Yak in Gansu Province, China

2019 ◽  
Vol 8 (37) ◽  
Author(s):  
Fengqin Wen ◽  
Xiaoyong Xing ◽  
Shijun Bao ◽  
Yonghao Hu ◽  
Bao-cheng Hao
Keyword(s):  
Genome Sequence ◽  
Liver Lesion ◽  
Gansu Province ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

We report here the isolation, sequencing of the complete closed genome, and annotation of Corynebacterium xerosis strain GS1. This strain was isolated from the liver lesion of a yak in Gansu Province, China. The genome consists of one chromosome with 2,738,835 bp and comprises 2,304 protein-coding genes.

scholarly journals Draft Genome Sequence of the Multiple Antibiotic Producer Bacillus velezensis X-BIO-1

2020 ◽  
Vol 9 (50) ◽  
Author(s):  
S. V. Kravchenko ◽  
D. V. Poshvina ◽  
A. V. Vasilchenko ◽  
A. S. Vasilchenko
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Bacillus Velezensis ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

ABSTRACT Here, we describe the draft genome sequence of Bacillus velezensis strain X-BIO-1, which contains 16 contigs, comprising 3,861,135 bp with a G+C content of 46.54%. The annotated draft genome contains 3,710 protein-coding genes and 62 RNA genes. We identified genes responsible for the synthesis of various antibiotics.

scholarly journals Draft Genome Sequence of Mycobacterium colombiense

2017 ◽  
Vol 5 (14) ◽  
Author(s):  
Amar Bouam ◽  
Catherine Robert ◽  
Anthony Levasseur ◽  
Michel Drancourt
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Positive Patient ◽  
Draft Genome Sequence ◽  
Hiv Positive ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Rna Genes

ABSTRACT Mycobacterium colombiense is a rapidly growing mycobacterium initially isolated from the blood of an HIV-positive patient in Colombia. Its 5,854,893-bp draft genome exhibits a G+C content of 67.64%, 5,233 protein-coding genes, and 54 predicted RNA genes.

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