scholarly journals Complete Genome Sequence of the Plant Pathogen Erwinia amylovora Strain ATCC 49946

2010 ◽  
Vol 192 (7) ◽  
pp. 2020-2021 ◽  
Author(s):  
M. Sebaihia ◽  
A. M. Bocsanczy ◽  
B. S. Biehl ◽  
M. A. Quail ◽  
N. T. Perna ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Plant Pathogen ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Fire Blight ◽  
Erwinia Amylovora ◽  
Strain Atcc ◽  
Important Disease

ABSTRACT Erwinia amylovora causes the economically important disease fire blight that affects rosaceous plants, especially pear and apple. Here we report the complete genome sequence and annotation of strain ATCC 49946. The analysis of the sequence and its comparison with sequenced genomes of closely related enterobacteria revealed signs of pathoadaptation to rosaceous hosts.

scholarly journals Complete Genome Sequence of the Fire Blight Pathogen Erwinia amylovora CFBP 1430 and Comparison to Other Erwinia spp.

2010 ◽  
Vol 23 (4) ◽  
pp. 384-393 ◽  
Author(s):  
Theo H. M. Smits ◽  
Fabio Rezzonico ◽  
Tim Kamber ◽  
Jochen Blom ◽  
Alexander Goesmann ◽  
...  
Keyword(s):  
Comparative Genomics ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Fire Blight ◽  
Erwinia Amylovora ◽  
Control Strategies ◽  
Economic Importance ◽  
Secretion Systems ◽  
Evolutionary Aspects

Fire blight, caused by the enterobacterium Erwinia amylovora, is a devastating disease of rosaceous plants that has global economic importance for apple and pear production and trade. The complete genome of E. amylovora CFBP 1430 was sequenced, annotated, and compared with the genomes of other Erwinia spp. Several singleton and shared features of the E. amylovora CFBP 1430 genome were identified that offer a first view into evolutionary aspects within the genus Erwinia. Comparative genomics identified or clarified virulence and fitness determinants and secretion systems. Novel insights revealed in the genome of E. amylovora CFBP 1430 hold potential for exploitation to improve the design of more effective fire blight control strategies.

scholarly journals Complete Genome Sequence of the Fire Blight Pathogen Strain Erwinia amylovora Ea1189

2020 ◽  
Vol 33 (11) ◽  
pp. 1277-1279 ◽  
Author(s):  
Menghao Yu ◽  
Jugpreet Singh ◽  
Awais Khan ◽  
George W. Sundin ◽  
Youfu Zhao
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Fire Blight ◽  
Molecular Mechanisms ◽  
Erwinia Amylovora ◽  
De Novo ◽  
The United States ◽  
Bacterial Disease ◽  
Circular Chromosome

Erwinia amylovora causes fire blight, the most devastating bacterial disease of apples and pears in the United States and worldwide. The model strain E. amylovora Ea1189 has been extensively used to understand bacterial pathogenesis and molecular mechanisms of bacterial-plant interactions. In this work, we sequenced and assembled the de novo genome of Ea1189, using a combination of long Oxford Nanopore Technologies and short Illumina sequence reads. A complete gapless genome assembly of Ea1189 consists of a 3,797,741-bp circular chromosome and a 28,259-bp plasmid with 3,472 predicted genes, including 78 transfer RNAs, 22 ribosomal RNAs, and 20 noncoding RNAs. A comparison of the Ea1189 genome to previously sequenced E. amylovora complete genomes showed 99.94 to 99.97% sequence similarity with 314 to 946 single nucleotide polymorphisms. We believe that the availability of the complete genome sequence of strain Ea1189 will further support studies to understand evolution, diversity and structural variations of Erwinia strains, as well as the molecular basis of E. amylovora pathogenesis and its interactions with host plants, thus facilitating the development of effective management strategies for this important disease.

scholarly journals Complete Genome Sequence of Erwinia amylovora Strain TS3128, a Korean Strain Isolated in an Asian Pear Orchard in 2015

2021 ◽  
Vol 10 (37) ◽  
Author(s):  
In-Jeong Kang ◽  
Duck Hwan Park ◽  
Young-Kee Lee ◽  
Sang-Wook Han ◽  
Youn-Sig Kwak ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Fire Blight ◽  
Erwinia Amylovora ◽  
Korean Strain ◽  
Content Type ◽  
Asian Pear ◽  
Pacbio Rs Ii ◽  
Pear Orchard

Erwinia amylovora causes fire blight, a devastating disease of apples and pears. Here, we report the complete genome sequence and annotation of E. amylovora strain TS3128, which was isolated from Anseong, South Korea, where fire blight first occurred in 2015, using the PacBio RS II system.

scholarly journals Complete Genome Sequence of Vitreoscilla filiformis (ATCC 15551), Used as a Cosmetic Ingredient

2017 ◽  
Vol 5 (34) ◽  
Author(s):  
Sandy Contreras ◽  
Pierre Sagory-Zalkind ◽  
Hélène Blanquart ◽  
Agnès Iltis ◽  
Stanislas Morand
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Strain Atcc ◽  
Content Type ◽  
Cosmetic Industry

ABSTRACT We report the first complete genome sequence of a Vitreoscilla filiformis strain (ATCC 15551) that is used in the cosmetic industry as Vitreoscilla ferment. The assembled genome consisted of one chromosome and two plasmids. These data will provide valuable information and important insights into the physiology of this filamentous organism.

scholarly journals Complete Genome Sequence of Clostridium innocuum Strain ATCC 14501

2020 ◽  
Vol 9 (30) ◽  
Author(s):  
K. E. Cherny ◽  
E. A. Ozer ◽  
T. J. Kochan ◽  
L. K. Kociolek
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Strain Atcc ◽  
Appendiceal Abscess ◽  
Emerging Pathogen ◽  
Content Type

ABSTRACT We report the complete genome sequence of Clostridium innocuum ATCC 14501, which was isolated in 1962 from an appendiceal abscess. At that time, the isolated strain was designated C. innocuum, given its suspected lack of virulence, but recent reports suggest that C. innocuum is an emerging pathogen.

scholarly journals Complete Genome Sequence of Pseudomonas syringae pv. lapsa Strain ATCC 10859, Isolated from Infected Wheat

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Jun Kong ◽  
Hongshan Jiang ◽  
Baiyun Li ◽  
Wenjun Zhao ◽  
Zhihong Li ◽  
...  
Keyword(s):  
Pseudomonas Syringae ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Gc Content ◽  
Gene Clusters ◽  
Strain Atcc ◽  
Circular Chromosome ◽  
Coding Sequences

Pseudomonas syringae pv. lapsa is a pathovar of Pseudomonas syringae that can infect wheat. The complete genome of P. syringae pv. lapsa strain ATCC 10859 contains a 5,918,899-bp circular chromosome with 4,973 coding sequences, 16 rRNAs, 69 tRNAs, and an average GC content of 59.13%. The analysis of this genome revealed several gene clusters that are related to pathogenesis and virulence.

scholarly journals Complete Genome Sequence of the Copiotrophic Marine Bacterium Alteromonas macleodii Strain ATCC 27126T

2012 ◽  
Vol 194 (24) ◽  
pp. 6998-6998 ◽  
Author(s):  
A. Gonzaga ◽  
M. Lopez-Perez ◽  
A.-B. Martin-Cuadrado ◽  
R. Ghai ◽  
F. Rodriguez-Valera
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Marine Bacterium ◽  
Strain Atcc ◽  
Alteromonas Macleodii
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