scholarly journals Draft Genome Sequences of Two Clostridium Isolates from the Poultry Gastrointestinal Tract

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Jitendra Keshri ◽  
Rocio Ramirez ◽  
Raja Chalghoumi ◽  
Johnna K. Garrish ◽  
Bruce S. Seal ◽  
...  
Keyword(s):  
Gastrointestinal Tract ◽  
Broiler Chickens ◽  
Novel Species ◽  
Draft Genome ◽  
Genome Sequences ◽  
Commercial Broiler

ABSTRACT Here, we announce the draft genome sequences of two Clostridium strains, C8-1-8 and C2-6-12, isolated from the cecal contents of commercial broiler chickens (in Athens, GA). These strains may represent potentially novel species within the genus Clostridium, and these draft genomes allow further investigation into potential probiotics for poultry.

scholarly journals Draft Genome Sequences of Two Potentially Novel Bacillus Isolates from Backyard and Commercial Chicken Gastrointestinal Tracts

2020 ◽  
Vol 9 (22) ◽  
Author(s):  
Jitendra Keshri ◽  
Rocio Ramirez ◽  
Mark E. Berrang ◽  
Brian B. Oakley
Keyword(s):  
Broiler Chickens ◽  
Novel Species ◽  
Draft Genome ◽  
Gi Tract ◽  
Genome Sequences ◽  
Commercial Chicken ◽  
Commercial Broiler

ABSTRACT Here, we present the draft genome sequences of two Bacillus strains, HF117_J1_D and USDA818B3_A, isolated in Pomona, California, from the gastrointestinal (GI) tract of backyard and commercial broiler chickens, respectively. The draft genomes of both strains appear to represent novel species.

scholarly journals Draft Genome Sequences of Six Bacteria Isolated from the Benham Bank, Philippine Rise, Philippines

2019 ◽  
Vol 8 (29) ◽  
Author(s):  
Saul M. Rojas ◽  
Albert Remus R. Rosana ◽  
Andrew D. Montecillo ◽  
Mark Dondi M. Arboleda ◽  
Hildie Maria E. Nacorda ◽  
...  
Keyword(s):  
Surface Sediments ◽  
Novel Species ◽  
Draft Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Bottom Waters

We report here the draft genome sequences of six bacteria isolated from the near-bottom waters and surface sediments of the Benham Bank, Philippine Rise, Philippines. These genome sequences represent candidate novel species and/or strains from the families Flavobacteriaceae and Dermacoccaceae and the genera Idiomarina, Bacillus, and Vibrio.

scholarly journals Draft Genome Sequences of Neptuniibacter sp. Strains LFT 1.8 and ATR 1.1

2017 ◽  
Vol 5 (5) ◽  
Author(s):  
A. L. Diéguez ◽  
J. L. Romalde
Keyword(s):  
Aromatic Compound ◽  
Novel Species ◽  
Draft Genome ◽  
Pecten Maximus ◽  
Genome Sequences ◽  
Aromatic Compound Degradation

ABSTRACT We present the draft genomes of two strains previously identified as Neptuniibacter sp. LFT 1.8 (= CECT 8936 = DSM 100781) and ATR 1.1 (= CECT 8938 = DSM 100783) isolated from larvae of great scallops (Pecten maximus) and seawater, respectively. Both strains surely constitute two novel species in this genus, with putative applications for aromatic compound degradation.

scholarly journals Draft Genome Sequences for Five Strains ofTrabulsiella odontotermitis, Isolated fromHeterotermessp. Termite Gut: TABLE 1 

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Myrna Olvera-García ◽  
Héctor Fontes-Perez ◽  
America Chávez-Martínez ◽  
Oscar Ruiz Barrera ◽  
Felipe A. Rodríguez-Almeida ◽  
...  
Keyword(s):  
Complete Genome ◽  
Novel Species ◽  
Cellulose Degradation ◽  
Draft Genome ◽  
Biotechnological Application ◽  
Genome Sequences ◽  
The North ◽  
Termite Gut

Trabulsiella odontotermitisrepresents a novel species in the genusTrabulsiellawith no complete genome reported yet. Here, we describe the draft genome sequences of five isolates from termites present in the north of Mexico, which have an interesting pool of genes related to cellulose degradation with biotechnological application.

scholarly journals Draft Genome Sequences of Two Fusobacterium necrophorum Strains Isolated from the Uterus of Dairy Cows with Metritis

2019 ◽  
Vol 8 (17) ◽  
Author(s):  
Amye M. Francis ◽  
Soo Jin Jeon ◽  
Federico Cunha ◽  
KwangCheol Casey Jeong ◽  
Klibs N. Galvão
Keyword(s):  
Gastrointestinal Tract ◽  
Dairy Cows ◽  
Draft Genome ◽  
Fusobacterium Necrophorum ◽  
Foot Rot ◽  
Genome Sequences ◽  
Comparative Genome ◽  
Content Type

A commensal in the gastrointestinal tract, Fusobacterium necrophorum is involved in the pathogenicity of abscesses, foot rot, and metritis in cattle. Here, we present the draft genomes of two Fusobacterium necrophorum isolates from the uterus of dairy cows with metritis to allow for future comparative genome studies.

scholarly journals Draft Genome Sequences of Bifidobacterium Strains Isolated from Dietary Supplements and Cultured Food Products

2018 ◽  
Vol 6 (26) ◽  
Author(s):  
Tammy J. Barnaba ◽  
Jayanthi Gangiredla ◽  
Mark K. Mammel ◽  
David W. Lacher ◽  
Christopher A. Elkins ◽  
...  
Keyword(s):  
Gastrointestinal Tract ◽  
Dietary Supplements ◽  
Draft Genome ◽  
Food Products ◽  
Genome Sequences ◽  
Content Type

Here, we present the genome sequences of 23 Bifidobacterium isolates from several commercially available dietary supplements and cultured food products. Strains of this genus are natural inhabitants of the mammalian mouth, gastrointestinal tract, and vagina.

scholarly journals Draft Genome Sequences of Legionella Presumptive Novel Species Isolated during Environmental Surveillance in Artificial Water Systems

2021 ◽  
Vol 10 (19) ◽  
Author(s):  
Luna Girolamini ◽  
Silvano Salaris ◽  
Massimiliano Orsini ◽  
Maria Rosaria Pascale ◽  
Marta Mazzotta ◽  
...  
Keyword(s):  
Distribution System ◽  
Water Distribution ◽  
Water Distribution System ◽  
Novel Species ◽  
Draft Genome ◽  
Environmental Surveillance ◽  
Genome Sequences ◽  
Macrophage Infectivity Potentiator ◽  
Artificial Water ◽  
Macrophage Infectivity

ABSTRACT We present the draft genome sequences of three Legionella strains that were isolated from a hotel water distribution system. Legionella species identification was performed by macrophage infectivity potentiator (mip) and RNA polymerase β subunit (rpoB) gene sequencing. Whole-genome sequencing and average nucleotide identity results supported the hypothesis of new Legionella species isolation.

scholarly journals Draft Genome Sequences of Strains TRE 1, TRE D, TRE H, and TRI 7, Isolated from Tamarins and Belonging to Four Putative Novel Bifidobacterium Species

2018 ◽  
Vol 6 (3) ◽  
Author(s):  
Edoardo Puglisi ◽  
Paola Mattarelli ◽  
Monica Modesto ◽  
Andrea Bonetti ◽  
Caterina Spiezio ◽  
...  
Keyword(s):  
Novel Species ◽  
Draft Genome ◽  
Genome Sequences ◽  
Bifidobacterium Species ◽  
Zoological Park ◽  
Gc Contents

ABSTRACT Bifidobacterium sp. strains TRE 1, TRE D, TRE H, and TRI 7 were isolated from two tamarins housed in Parco Natura Viva, Garda Zoological Park S.r.l. (Bussolengo, Verona, Italy). These strains belong to four putative novel species of the genus Bifidobacterium . The genome sizes were 2.7 Mb for TRE 1, 2.7 Mb for TRE D, 2.4 Mb for TRE H, and 2.7 Mb for TRI 7. The average GC contents were 63.18% for TRE 1, 58.27% for TRE D, 57.11% for TRE H, and 63.79% for TRI 7.

scholarly journals Draft Genome Sequences of the Type Strains of Three Clavibacter Subspecies and Atypical Peach-Colored Strains Isolated from Tomato

2018 ◽  
Vol 7 (18) ◽  
Author(s):  
Ebrahim Osdaghi ◽  
Perrine Portier ◽  
Martial Briand ◽  
Géraldine Taghouti ◽  
Marie-Agnes Jacques
Keyword(s):  
Novel Species ◽  
Draft Genome ◽  
Clavibacter Michiganensis ◽  
Genome Sequences ◽  
Content Type ◽  
Type Strains

Here, we present the draft genome sequences of 10 Clavibacter sp. strains, including the type strains of different subspecies of Clavibacter michiganensis and a potentially novel species within the genus.

scholarly journals High-Quality Draft Genome Sequences of 28 Enterococcus sp. Isolates

2010 ◽  
Vol 192 (9) ◽  
pp. 2469-2470 ◽  
Author(s):  
Kelli L. Palmer ◽  
Karen Carniol ◽  
Janet M. Manson ◽  
David Heiman ◽  
Terry Shea ◽  
...  
Keyword(s):  
Gastrointestinal Tract ◽  
Enterococcus Faecalis ◽  
Draft Genome ◽  
Genome Sequences ◽  
High Quality ◽  
Hospital Acquired Infection ◽  
Gram Positive Bacteria ◽  
Healthy Humans ◽  
Diverse Origin ◽  
Hospital Acquired

ABSTRACT The enterococci are low-GC Gram-positive bacteria that have emerged as leading causes of hospital-acquired infection. They are also commensals of the gastrointestinal tract of healthy humans and most other animals with gastrointestinal flora and are important for food fermentations. Here we report the availability of draft genome sequences for 28 enterococcal strains of diverse origin, including the species Enterococcus faecalis, E. faecium, E. casseliflavus, and E. gallinarum.

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