scholarly journals Draft Genome Sequence of a Medium- and Long-Chain n-Alkane-Degrading Bacterium, Tsukamurella tyrosinosolvens Strain PS2, with Two Genetic Systems for Alkane Degradation

2019 ◽  
Vol 8 (17) ◽  
Author(s):  
Valeriya A. Romanova ◽  
Eugenia A. Boulygina ◽  
Maria N. Siniagina ◽  
Maria I. Markelova ◽  
Tatiana V. Grigoryeva ◽  
...  
Keyword(s):  
Organic Synthesis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Carbon Sources ◽  
Draft Genome Sequence ◽  
Alkane Degradation ◽  
Content Type ◽  
Degrading Bacterium ◽  
Wide Range ◽  
Long Chain

Here, we report the genome sequence of Tsukamurella tyrosinosolvens strain PS2, which was isolated from hydrocarbon sludge of an organic synthesis factory. This strain was able to utilize a wide range of n-alkanes, from C16 to C35, as sole carbon sources.

scholarly journals Draft Genome Sequence of Nocardioides luteus Strain BAFB, an Alkane-Degrading Bacterium Isolated from JP-7-Polluted Soil

2017 ◽  
Vol 5 (4) ◽  
Author(s):  
Lisa M. Brown ◽  
Thusitha S. Gunasekera ◽  
Oscar N. Ruiz
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Polluted Soil ◽  
Draft Genome Sequence ◽  
Alkane Degradation ◽  
Positive Bacterium ◽  
Gram Positive ◽  
Coding Sequences ◽  
Content Type ◽  
Degrading Bacterium

ABSTRACT Nocardioides luteus strain BAFB is a Gram-positive bacterium that efficiently degrades C8 to C11 alkanes aerobically. The draft genome of N. luteus BAFB is 5.76 Mb in size, with 5,358 coding sequences and 69.9% G+C content. The genes responsible for alkane degradation are present in this strain.

scholarly journals Draft Genome Sequence of Rhodopirellula baltica Strain BR-MGV, a Planctomycete Isolated from Brazilian Mangrove Soil

2018 ◽  
Vol 7 (14) ◽  
Author(s):  
Juliana Eschholz de Araújo ◽  
Rodrigo Gouvêa Taketani ◽  
Michele de Cássia Pereira e Silva ◽  
Marcus Venicius de Mello Lourenço ◽  
Fernando Dini Andreote
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Mangrove Soil ◽  
Wide Range

Members of the phylum Planctomycetes, which are capable of surviving in a wide range of environments, are some of the least-explored bacteria. Here, we report the near-complete draft genome sequence and annotation of the planctomycete Rhodopirellula baltica BR-MGV, which was isolated from the soil of a contaminated Brazilian mangrove.

scholarly journals Draft Genome Sequence of Stenotrophomonas maltophilia Strain PE591, a Polyethylene-Degrading Bacterium Isolated from Savanna Soil

2021 ◽  
Vol 10 (32) ◽  
Author(s):  
Tayná Diniz Frederico ◽  
Julianna Peixoto ◽  
Jéssica Fernandes de Sousa ◽  
Carla Simone Vizzotto ◽  
Andrei Stecca Steindorff ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Bacterial Strain ◽  
Stenotrophomonas Maltophilia ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Plastic Debris ◽  
Content Type ◽  
Degrading Bacterium ◽  
Savanna Soil

We report the genome sequence of a polyethylene-degrading bacterial strain identified as Stenotrophomonas maltophilia strain PE591, which was isolated from plastic debris found in savanna soil. The genome was assembled in 16 scaffolds with a length of 4,751,236 bp, a GC content of 66.5%, and 4,432 predicted genes.

scholarly journals Draft Genome Sequence of the Phenol-Degrading Bacterium Cupriavidus sp. Strain P-10, Isolated from Trichloroethene-Contaminated Aquifer Soil

2018 ◽  
Vol 7 (18) ◽  
Author(s):  
Kenshi Suzuki ◽  
Fatma A. A. Aziz ◽  
Masahiro Honjo ◽  
Tomoka Nishimura ◽  
Kensei Masuda ◽  
...  
Keyword(s):  
Batch Culture ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Contaminated Aquifer ◽  
Content Type ◽  
Degrading Bacterium

A batch culture was enriched on phenol with trichloroethene-contaminated aquifer soil as an inoculum. Cupriavidus sp.

scholarly journals Genome Sequence of Bacillus megaterium O1, a Saponin-Degrading Bacterium

2020 ◽  
Vol 9 (40) ◽  
Author(s):  
Cassandra E. Overney ◽  
Jean J. Huang
Keyword(s):  
Carbon Source ◽  
Genome Sequence ◽  
Bacillus Megaterium ◽  
Sole Carbon Source ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Degrading Bacterium ◽  
Sapindus Saponaria ◽  
Insight Into

ABSTRACT Bacillus megaterium strain O1 was isolated from a soapnut (Sapindus saponaria) surface and degrades Quillaja saponin as a sole carbon source. We report the draft genome sequence of B. megaterium O1, which has an estimated size of 5.1 Mb. Study of this isolate will provide insight into mechanisms of saponin degradation.

scholarly journals Draft Genome Sequence of Xanthobacter tagetidis ATCC 700314T

2019 ◽  
Vol 8 (28) ◽  
Author(s):  
Syeda A. Fatima ◽  
Abigail E. Goen ◽  
Kyle S. MacLea
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Gram Negative ◽  
Content Type ◽  
Degrading Bacterium ◽  
A Genome ◽  
Autotrophic Bacterium

Xanthobacter tagetidis is a thiophene-degrading bacterium associated with root balls of the plant genus Tagetes, which includes marigolds. It is a Gram-negative facultatively autotrophic bacterium with pleomorphic morphology exhibiting bent and branching rods. From strain TagT2CT (= ATCC 700314T), we report a genome assembly of 4,945,221 bp and a 69.5% G+C content.

scholarly journals Draft Genome Sequence of Novosphingobium panipatense Strain P5:ABC, Isolated from Hydrocarbon-Contaminated Soil from Noonmati Refinery, Assam, India

2017 ◽  
Vol 5 (45) ◽  
Author(s):  
Arvind Kumar Singh ◽  
Bobby Chettri ◽  
Arpita Ghosh ◽  
Surendra K. Chikara ◽  
Timir Tripathi
Keyword(s):  
Genome Sequence ◽  
Contaminated Soil ◽  
Draft Genome ◽  
Hydrocarbon Degradation ◽  
Draft Genome Sequence ◽  
Genomic Information ◽  
Content Type ◽  
Degrading Bacterium ◽  
Petroleum Contaminated Soil

ABSTRACT Novosphingobium panipatense P5:ABC is a hydrocarbon-degrading bacterium isolated from petroleum-contaminated soil. Here, we present the 5.74-Mb draft genome sequence with 5,206 genes and an average G+C content of 64.7%. The genomic information will improve our understanding of the diversity of N. panipatense and the mechanisms of microbe-based hydrocarbon degradation.

scholarly journals Draft Genome Sequence of Thiobacimonas sp. Strain D13, a Phthalate Ester-Degrading Bacterium Isolated from Deep-Sea Sediments

2019 ◽  
Vol 8 (24) ◽  
Author(s):  
Yang Liu ◽  
Tuyan Luo ◽  
Qiu Lin ◽  
Runying Zeng
Keyword(s):  
Genome Sequence ◽  
Deep Sea ◽  
Molecular Mechanisms ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Phthalate Ester ◽  
Content Type ◽  
Southeastern Pacific ◽  
Degrading Bacterium ◽  
Degradation Ability

Thiobacimonas sp. strain D13, newly isolated from the sediments of the southeastern Pacific, can effectively degrade phthalate ester. Here, we report the 5.22-Mbp draft genome sequence of this strain, which will provide insights into the molecular mechanisms underlying its degradation ability.

scholarly journals Draft Genome Sequence of Pseudarthrobacter sp. Strain ATCC 49442 (Formerly Micrococcus luteus), a Pyridine-Degrading Bacterium

2020 ◽  
Vol 9 (38) ◽  
Author(s):  
Nidhi Gupta ◽  
Kelly A. Skinner ◽  
Zarath M. Summers ◽  
Janaka N. Edirisinghe ◽  
Pamela B. Weisenhorn ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Micrococcus Luteus ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Strain Atcc ◽  
Genome Length ◽  
Content Type ◽  
Degrading Bacterium

ABSTRACT We present here the draft genome sequence of a pyridine-degrading bacterium, Micrococcus luteus ATCC 49442, which was reclassified as Pseudarthrobacter sp. strain ATCC 49442 based on its draft genome sequence. Its genome length is 4.98 Mbp, with 64.81% GC content.

scholarly journals Genome Sequence of Pseudomonas putida Strain ASAD, an Acetylsalicylic Acid-Degrading Bacterium

2017 ◽  
Vol 5 (41) ◽  
Author(s):  
Rebecca E. Parales ◽  
Rachita Navara ◽  
Rebecca Gettys ◽  
Jean J. Huang
Keyword(s):  
Energy Source ◽  
Acetylsalicylic Acid ◽  
Pseudomonas Putida ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Biodegradation Pathway ◽  
Degrading Bacterium ◽  
Insight Into

ABSTRACT Pseudomonas putida strain ASAD was isolated from compost because of its ability to utilize aspirin (acetylsalicylic acid) as a carbon and energy source. We report the draft genome sequence of strain ASAD, with an estimated length of 6.9 Mb. Study of this isolate will provide insight into the aspirin biodegradation pathway.

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