scholarly journals Genome Sequence of Lysobacter sp. Strain BMK333-48F3, the Producer Strain of Potent Lipopeptide Antibiotics of the Tripropeptin Family

2021 ◽  
Vol 10 (49) ◽  
Author(s):  
Patricia Arlt ◽  
Hideki Hashizume ◽  
Masayuki Igarashi ◽  
Harald Gross
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Draft Genome ◽  
Genome Mining ◽  
Draft Genome Sequence ◽  
Producer Strain ◽  
Lipopeptide Antibiotics ◽  
Insight Into

Lysobacter sp. strain BMK333-48F3 is known primarily for its production of the antibiotically active tripropeptins. Here, we report its draft genome sequence, which will give insight into the biosynthesis of tripropeptins and enable genome mining for further secondary metabolites.

scholarly journals Draft Genome Sequence of Nonomuraea sp. Strain C10, a Producer of Brartemicin, Isolated from a Mud Dauber Wasp Nest in Nepal

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Niraj Aryal ◽  
Saefuddin Aziz ◽  
Prajwal Rajbhandari ◽  
Harald Gross
Keyword(s):  
Secondary Metabolites ◽  
Natural Product ◽  
Genome Sequence ◽  
Draft Genome ◽  
Genome Mining ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Insight Into

Nonomuraea sp. strain C10 produces the cytotoxic natural product brartemicin. Here, we report its draft genome sequence to get insight into brartemicin biosynthesis and to enable genome mining for novel secondary metabolites.

scholarly journals Draft Genome Sequence of Streptomyces sp. TP-A0871, a Producer of Heronamide C

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Hisayuki Komaki ◽  
Natsuko Ichikawa ◽  
Akira Hosoyama ◽  
Nobuyuki Fujita ◽  
Yasuhiro Igarashi
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Draft Genome ◽  
Genome Mining ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Orphan Gene ◽  
Nonribosomal Peptide ◽  
Streptomyces Sp ◽  
Insight Into

Streptomyces sp. TP-A0871 produces the polyene macrolactam heronamide C. Here, we report its draft genome sequence to get insight into heronamide biosynthesis and genome-mining for novel secondary metabolites of polyketide and nonribosomal peptide classes. The genome encodes over nine orphan gene clusters for polyketide and/or nonribosomal peptide syntheses.

scholarly journals Draft Genome Sequence of Streptomyces hygroscopicus subsp. hygroscopicus NBRC 16556

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Hisayuki Komaki ◽  
Natsuko Ichikawa ◽  
Akio Oguchi ◽  
Moriyuki Hamada ◽  
Tomohiko Tamura ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Draft Genome ◽  
Genome Mining ◽  
Culture Collection ◽  
Streptomyces Hygroscopicus ◽  
Draft Genome Sequence ◽  
Nucleotide Identity ◽  
Taxonomic Identification ◽  
Average Nucleotide Identity

Here, we report the draft genome sequence of strain NBRC 16556, deposited as Streptomyces hygroscopicus subsp. hygroscopicus into the NBRC culture collection. An average nucleotide identity analysis confirmed that the taxonomic identification is correct. The genome sequence will serve as a valuable reference for genome mining to search new secondary metabolites.

scholarly journals Draft Genome Sequence of Burkholderia reimsis BE51, a Plant-Associated Bacterium Isolated from Agricultural Rhizosphere

2018 ◽  
Vol 7 (13) ◽  
Author(s):  
Qassim Esmaeel ◽  
Alaa Issa ◽  
Lisa Sanchez ◽  
Christophe Clément ◽  
Cédric Jacquard ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Maize Rhizosphere ◽  
Biocontrol Activity ◽  
Plant Growth Promoting ◽  
Growth Promoting ◽  
Insight Into

Burkholderia reimsis BE51, isolated from maize rhizosphere, has a promising biocontrol activity against a set of phytopathogens. Here, we report its draft genome sequence with the aim of providing insight into the potentially produced secondary metabolites and genes related to plant growth-promoting and biocontrol properties.

scholarly journals Draft Genome Sequence of the Lichen-Forming Fungus Ramalina intermedia Strain YAF0013

2018 ◽  
Vol 6 (23) ◽  
Author(s):  
Yi Wang ◽  
Xiaolong Yuan ◽  
Li Chen ◽  
Xinyu Wang ◽  
Changtian Li
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Functional Annotation ◽  
Draft Genome ◽  
Genome Mining ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Here, we report a draft genome sequence of Ramalina intermedia strain YAF0013. The functional annotation of R. intermedia provides important information related to its ability to produce secondary metabolites. The genome sequence reported here builds the basis for further genome mining.

scholarly journals Draft Genome Sequence of Fungus Clonostachys rosea Strain YKD0085

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Shuai Liu ◽  
Yaowen Chang ◽  
Xujia Hu ◽  
Xuanyun Gong ◽  
Yingtong Di ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Functional Annotation ◽  
Draft Genome ◽  
Genome Mining ◽  
Draft Genome Sequence ◽  
Clonostachys Rosea

Here, we report the draft genome sequence of Clonostachys rosea (strain YKD0085). The functional annotation of C. rosea provides important information related to its ability to produce secondary metabolites. The genome sequence presented here builds the basis for further genome mining.

scholarly journals Draft Genome Sequences of Fungus Aspergillus calidoustus

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Fabian Horn ◽  
Jörg Linde ◽  
Derek J. Mattern ◽  
Grit Walther ◽  
Reinhard Guthke ◽  
...  
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Functional Annotation ◽  
Draft Genome ◽  
Genome Mining ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Genome Sequences

Here, we report the draft genome sequence of Aspergillus calidoustus (strain SF006504) . The functional annotation of A. calidoustus predicts a relatively large number of secondary metabolite gene clusters. The presented genome sequence builds the basis for further genome mining.

scholarly journals Draft Genome Sequence of the Putative Marine Pathogen Aquimarina sp. Strain I32.4

2018 ◽  
Vol 6 (17) ◽  
Author(s):  
Hilary J. Ranson ◽  
Jason LaPorte ◽  
Edward Spinard ◽  
Andrei Y. Chistoserdov ◽  
Marta Gomez-Chiarri ◽  
...  
Keyword(s):  
Virulence Factors ◽  
Genome Sequence ◽  
Draft Genome ◽  
Homarus Americanus ◽  
Draft Genome Sequence ◽  
American Lobster ◽  
Content Type ◽  
Shell Disease ◽  
Insight Into

ABSTRACT Aquimarina sp. strain I32.4 (formerly Aquimarina sp. ‘ homaria ’) is a putative pathogen involved in epizootic shell disease in the American lobster ( Homarus americanus ). We report here the draft genome sequence for Aquimarina sp. strain I32.4 and describe virulence factors that may provide insight into its mechanism of pathogenicity.

scholarly journals Draft Genome Sequence of “ Candidatus Phytoplasma oryzae” Strain Mbita1, the Causative Agent of Napier Grass Stunt Disease in Kenya

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Anne Fischer ◽  
Ivette Santana-Cruz ◽  
Lillian Wambua ◽  
Cassandra Olds ◽  
Charles Midega ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Agricultural Production ◽  
Plant Pathogens ◽  
Genomic Organization ◽  
Draft Genome ◽  
Napier Grass ◽  
Eastern Africa ◽  
Draft Genome Sequence ◽  
Economic Losses ◽  
Insight Into

Phytoplasmas are bacterial plant pathogens with devastating impact on agricultural production worldwide. In eastern Africa, Napier grass stunt disease causes serious economic losses in the smallholder dairy industry. This draft genome sequence of “ Candidatus Phytoplasma oryzae” strain Mbita1 provides insight into its genomic organization and the molecular basis of pathogenicity.

scholarly journals Draft Genome Sequence of the Symbiotically Competent Cyanobacterium Nostoc sp. Strain KVJ20

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Marie-Josée H. Halsør ◽  
Anton Liaimer ◽  
Seila Pandur ◽  
Inger L. U. Ræder ◽  
Arne O. Smalås ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Cell Lines ◽  
Cancer Cell ◽  
Genome Sequence ◽  
Draft Genome ◽  
Cancer Cell Lines ◽  
Draft Genome Sequence ◽  
Inhibitory Effects ◽  
Content Type

Nostoc sp. strain KVJ20 was isolated from the symbiotic organs of the liverwort Blasia pusilla. This cyanobacterium has been shown to have broad symbiotic competence, and bacterial extracts have inhibitory effects on cancer cell lines and microbes. An array of genes for the production of secondary metabolites is present.

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