Computational grounding of point mutagenesis to enhance the thermostability of human peroxiredoxin 6

BIOPHYSICS ◽  
2016 ◽  
Vol 61 (1) ◽  
pp. 13-16 ◽  
Author(s):  
M. S. Kondratyev ◽  
A. V. Kabanov ◽  
M. G. Kholyavka ◽  
M. G. Sharapov ◽  
N. N. Khechinashvili
Author(s):  
Jiangfeng Liao ◽  
Yusi Zhang ◽  
Xiaochun Chen ◽  
Jing Zhang

2013 ◽  
Vol 253 ◽  
pp. 223-231 ◽  
Author(s):  
Esther Gramage ◽  
Carmen Pérez-García ◽  
Marta Vicente-Rodríguez ◽  
Silke Bollen ◽  
Loreto Rojo ◽  
...  

1992 ◽  
Vol 12 (8) ◽  
pp. 3356-3364
Author(s):  
I Apel ◽  
C L Yu ◽  
T Wang ◽  
C Dobry ◽  
M E Van Antwerp ◽  
...  

The proteins encoded by cellular and viral src genes are believed to be involved in the transmission of mitogenic signals, the nuclear recipients of which are largely unknown. In this work, we report that four different v-src-transformed cell lines from three different species possess elevated levels of junB transcripts. Transient expression of junB promoter-chloramphenicol acetyltransferase constructs in NIH 3T3 cells was used to demonstrate that the increase in junB transcripts was specifically associated with v-src expression and could not be recapitulated with a c-src, v-H-ras, or v-raf expression vector. Deletion mutants were used to localize the v-src-responsive region in the junB promoter to a 121-nucleotide region encompassing the CCAAT and TATAA elements. This region is distinct from one in the 5' untranslated region of the junB gene which is required to maintain its high-level basal expression. Point mutagenesis of the junB TATAA box completely abolished v-src responsiveness, suggesting that proteins which bind to this element are modified by src transformation. Several v-src and c-src mutants were used to demonstrate that elevated tyrosine kinase activity of src proteins is required for the observed effects on junB expression. Finally, homology between the TATAA box regions of junB and the unrelated but src-responsive gene 9E3/CEF-4 suggests that modulation of gene activity through proteins which bind to this region may be a recurrent, although not exclusive, theme in src transforming action. Our results suggest that src proteins may modulate some nuclear effectors through pathways not involving cellular ras or raf gene products.


2013 ◽  
Vol 73 (11) ◽  
pp. 3460-3469 ◽  
Author(s):  
Frank Rolfs ◽  
Marcel Huber ◽  
Florian Gruber ◽  
Friederike Böhm ◽  
Herbert J. Pfister ◽  
...  

2007 ◽  
Vol 179 (4) ◽  
pp. 747-760 ◽  
Author(s):  
Angelika Kümin ◽  
Matthias Schäfer ◽  
Nikolas Epp ◽  
Philippe Bugnon ◽  
Christiane Born-Berclaz ◽  
...  

Peroxiredoxin 6 (Prdx6) is a cytoprotective enzyme with largely unknown in vivo functions. Here, we use Prdx6 knockout mice to determine its role in UV protection and wound healing. UV-mediated keratinocyte apoptosis is enhanced in Prdx6-deficient mice. Upon skin injury, we observe a severe hemorrhage in the granulation tissue of knockout animals, which correlates with the extent of oxidative stress. At the ultrastructural level endothelial cells appear highly damaged, and their rate of apoptosis is enhanced. Knock-down of Prdx6 in cultured endothelial cells also increases their susceptibility to oxidative stress, thus confirming the sensitivity of this cell type to loss of Prdx6. Wound healing studies in bone marrow chimeric mice demonstrate that Prdx6-deficient inflammatory and endothelial cells contribute to the hemorrhage phenotype. These results provide insight into the cross-talk between hematopoietic and resident cells at the wound site and the role of reactive oxygen species in this interplay.


2010 ◽  
Vol 36 (8) ◽  
pp. 451-462 ◽  
Author(s):  
Isaac K. Sundar ◽  
Sangwoon Chung ◽  
Jae-Woong Hwang ◽  
Gnanapragasam Arunachalam ◽  
Suzanne Cook ◽  
...  

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