Kinetic and thermodynamic analysis of dimerization inhibitors binding to HIV protease monomers by surface plasmon resonance

Author(s):  
P. V. Ershov ◽  
O. V. Gnedenko ◽  
A. A. Molnar ◽  
A. V. Lisitsa ◽  
A. S. Ivanov ◽  
...  
2012 ◽  
Vol 58 (1) ◽  
pp. 43-49 ◽  
Author(s):  
P.V. Ershov ◽  
O.V. Gnedenko ◽  
A.A. Molnar ◽  
A.V. Lisitsa ◽  
A.S. Ivanov ◽  
...  

Here, we describe the analysis of kinetic and thermodynamic parameters for binding of peptide and nonpeptide dimerization inhibitors to immobilized HIV protease (HIVp) monomers by using surface plasmon resonance. Molecular interactions were investigated at different inhibitors concentrations (0-80 μM) and temperatures (15-35°C). The kinetic, equilibrium and thermodynamic parameters have been determined. It was found that both inhibitors were characterized by similar interaction parameters. The complex formation is entropically driven process for both inhibitors. The entropic term(-ТΔS) had the value about -20 kcal/mol while the enthalpic term (ΔH) had the positive value about 14 kcal/mol and counteracted the complex formation.


Bioimpacts ◽  
2017 ◽  
Vol 7 (2) ◽  
pp. 91-97 ◽  
Author(s):  
Maryam Sharifi ◽  
Jafar Ezzati Nazhad Dolatabadi ◽  
Farzaneh Fathi ◽  
Mostafa Zakariazadeh ◽  
Abolfazl Barzegar ◽  
...  

2020 ◽  
pp. 44-49
Author(s):  
I. N. Pavlov

Two optical methods, namely surface plasmon resonance imaging and frustrated total internal reflection, are described in the paper in terms of comparing their sensitivity to change of refractive index of a thin boundary layer of an investigated medium. It is shown that, despite the fact that the theoretically calculated sensitivity is higher for the frustrated total internal reflection method, and the fact that usually in practice the surface plasmon resonance method, on the contrary, is considered more sensitive, under the same experimental conditions both methods show a similar result.


2010 ◽  
Vol 130 (7) ◽  
pp. 269-274 ◽  
Author(s):  
Takeshi Onodera ◽  
Takuzo Shimizu ◽  
Norio Miura ◽  
Kiyoshi Matsumoto ◽  
Kiyoshi Toko

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