Cyanide binding to canine myeloperoxidase

1989 ◽  
Vol 67 (4-5) ◽  
pp. 187-191 ◽  
Author(s):  
Leah A. Marquez ◽  
H. Brian Dunford
Keyword(s):  
Rate Constant ◽  
Binding Sites ◽  
Ph Dependence ◽  
Order Rate Constant ◽  
Protonated Form ◽  
Isosbestic Point ◽  
Equilibrium Binding ◽  
Cyanide Binding ◽  
Kinetics Of ◽  
Base Group

Equilibria and kinetics of cyanide binding to canine myeloperoxidase were studied. Spectral results support the presence of two heme binding sites; an isosbestic point at 444 nm and a linear Scatchard plot suggest that the binding affinity of cyanide to the two subunits of the enzyme is the same. The dissociation constant is 0.53 μM. The pH dependence of the apparent second order rate constant indicates the presence of an acid–base group on the enzyme with a pKa of 3.8 ± 0.1. The protonated form of cyanide binds to the basic enzyme with a rate constant of (4.3 ± 0.3) × 106 M−1 s−1.Key words: myeloperoxidase, cyanide binding, equilibrium binding, ligand binding kinetics.

Oxidation of Nickel(II) and Manganese(II) by Peroxodisulfate in Aqueous Solution in the Presence of Molybdate. Crystal Structure of the (NH4)6[NiMo9O32].6H2O Product

1992 ◽  
Vol 45 (12) ◽  
pp. 1943 ◽  
Author(s):  
SJ Dunne ◽  
RC Burns ◽  
GA Lawrance
Keyword(s):  
Rate Constant ◽  
Linear Dependence ◽  
Ph Dependence ◽  
Order Rate Constant ◽  
X Ray Diffraction ◽  
X Ray ◽  
First Order ◽  
Oxidant Concentration ◽  
Ph Range ◽  
Kinetics Of

Oxidation of Ni2+,aq, by S2O82- to nickel(IV) in the presence of molybdate ion, as in the analogous manganese system, involves the formation of the soluble heteropolymolybdate anion [MMogO32]2- (M = Ni, Mn ). The nickel(IV) product crystallized as (NH4)6 [NiMogO32].6H2O from the reaction mixture in the rhombohedra1 space group R3, a 15.922(1), c 12.406(1) � ; the structure was determined by X-ray diffraction methods, and refined to a residual of 0.025 for 1741 independent 'observed' reflections. The kinetics of the oxidation were examined at 80 C over the pH range 3.0-5.2; a linear dependence on [S2O82-] and a non-linear dependence on l/[H+] were observed. The influence of variation of the Ni/Mo ratio between 1:10 and 1:25 on the observed rate constant was very small at pH 4.5, a result supporting the view that the precursor exists as the known [NiMo6O24H6]4- or a close analogue in solution. The pH dependence of the observed rate constant at a fixed oxidant concentration (0.025 mol dm-3) fits dequately to the expression kobs = kH [H+]/(Ka+[H+]) where kH = 0.0013 dm3 mol-1 s-1 and Ka = 4-0x10-5. The first-order dependence on peroxodisulfate subsequently yields a second-order rate constant of 0.042 dm3 mol-1 s-1. Under analogous conditions, oxidation of manganese(II) occurs eightfold more slowly than oxidation of nickel(II), whereas oxidation of manganese(II) by peroxomonosulfuric acid is 16-fold faster than oxidation by peroxodisulfate under similar conditions.

Studies on Horseradish Peroxidase. VII. A Kinetic Study of the Oxidation of Iodide by Horseradish Peroxidase Compound II

1971 ◽  
Vol 49 (18) ◽  
pp. 3059-3063 ◽  
Author(s):  
R. Roman ◽  
H. B. Dunford ◽  
M. Evett
Keyword(s):  
Ionic Strength ◽  
Horseradish Peroxidase ◽  
Kinetic Study ◽  
Rate Constant ◽  
Ph Dependence ◽  
Order Rate Constant ◽  
Acid Dissociation ◽  
Ph Range ◽  
Compound Ii ◽  
Kinetics Of

The kinetics of the oxidation of iodide ion by horseradish peroxidase compound II have been studied as a function of pH at 25° and ionic strength of 0.11. The logarithm of the second-order rate constant decreases linearly from 2.3 × 105 to 0.1 M−1 s−1 with increasing pH over the pH range 2.7 to 9.0. The pH dependence of the reaction is explained in terms of an acid dissociation outside the pH range of the study.

Studies on Horseradish Peroxidase. XI. On the Nature of Compounds I and II as Determined from the Kinetics of the Oxidation of Ferrocyanide

1973 ◽  
Vol 51 (4) ◽  
pp. 582-587 ◽  
Author(s):  
M. L. Cotton ◽  
H. B. Dunford
Keyword(s):  
Horseradish Peroxidase ◽  
Rate Constant ◽  
Active Sites ◽  
Ph Dependence ◽  
Order Rate Constant ◽  
Second Order ◽  
Compound I ◽  
Order Rate ◽  
Compound Ii ◽  
Kinetics Of

In order to investigate the nature of compounds I and II of horseradish peroxidase, the kinetics were studied of ferrocyanide oxidation catalyzed by these compounds which were prepared from three different oxidizing agents. The pH dependence of the apparent second-order rate constant for ferrocyanide oxidation by compound I, prepared from ethyl hydroperoxide and m-chloroperbenzoic acid, was interpreted in terms of an ionization on the enzyme with a pKa = 5.3, identical to that reported previously for hydrogen peroxide. The second-order rate constant for the compound II-ferrocyanide reaction also showed the same pH dependence for the three oxidizing substrates. However, with more accurate results, the compound II-ferrocyanide reaction was reinterpreted in terms of a single ionization with pKa = 8.5. The same dependence of ferrocyanide oxidation on pH suggests structurally identical active sites for compounds I and II prepared from the three different oxidizing substrates.

Article

1999 ◽  
Vol 77 (5-6) ◽  
pp. 1005-1008
Author(s):  
Ayla Khan ◽  
Alexei A Neverov ◽  
Anatoly K Yatsimirsky ◽  
R S Brown
Keyword(s):  
Rate Constant ◽  
Metal Ion ◽  
Order Rate Constant ◽  
Water Proton ◽  
First Order ◽  
Catalytic Rate Constant ◽  
Equilibrium Binding ◽  
Metal Ion Catalysis ◽  
Kinetics Of ◽  
Hydrolysis Of

The kinetics of methanolysis of acetyl imidazole (1) and acetyl pyrazole (2) have been investigated under anhydrous conditions in the presence of Zn(ClO4)2, Co(ClO4)2, and HClO4 at 25°C. In all cases, the plots of the pseudo-first-order rate constant for methanolysis (kobs) vs. [metal ion] or [HClO4] show saturation behavior indicative of equilibrium binding of the M2+ or H+ to the amide. Relative to the spontaneous methanolysis rate constant (ko), the catalytic rate constant obtained at saturation, kcat, is larger for metal-ion catalysis than for H+ catalysis. The (kcatH+/ko) ratio is 10.7 and 1.25 for 1 and 2, respectively, while the (kcatM2+/ko) for these divalent metals varies from 150-fold for 1 to between 700 and 5700-fold for 2. By contrast, in water, proton is far more effective at promoting the hydrolysis of 1 than are metals, the aqueous (kcatH+/ko) ratio being 560, while the (kcatZn2+ /ko) and (kcatNi2+/ko) ratios are 15 and 3.2, respectively.Key words: methanolysis, kinetics, metal-ion catalysis, acetyl imidazole, acetyl pyrazole.

scholarly journals The kinetics of ox kidney biliverdin reductase in the pre-steady state. Evidence that the dissociation of bilirubin is the rate-determining step

1989 ◽  
Vol 259 (3) ◽  
pp. 709-713 ◽  
Author(s):  
E Rigney ◽  
T J Mantle ◽  
F M Dickinson
Keyword(s):  
Steady State ◽  
Rate Constant ◽  
Ph Dependence ◽  
Order Rate Constant ◽  
Protein Fluorescence ◽  
Biliverdin Reductase ◽  
Rate Determining Step ◽  
Steady State Rate ◽  
State Rate ◽  
Kinetics Of

When the production of bilirubin by biliverdin reductase was monitored at 460 nm by stopped-flow spectrophotometry a ‘burst’ was observed with a first-order rate constant at pH 8 of 20 s-1. The steady-state rate was established on completion of the ‘burst’. When the reaction was monitored at 401 nm there was no observed steady-state rate, but a diminished pre-steady-state ‘burst’ reaction was still seen with a rate constant of 22 s-1. We argue that the rate-limiting reaction is the dissociation of bilirubin from an enzyme.NADP+.bilirubin complex. With NADPH as the cofactor the hydride-transfer step was shown to exhibit pH-dependence associated with an ionizing group with a pK of 7.2. The kinetics of NADPH binding to the enzyme at pH 7.0 were measured by monitoring the quenching of protein fluorescence on binding the coenzyme.

scholarly journals Alkylation of glyceraldehyde-3-phosphate dehydrogenase with haloacetylphosphonates. An unusual pH-dependence

1991 ◽  
Vol 275 (3) ◽  
pp. 767-773 ◽  
Author(s):  
Y K Li ◽  
J Boggaram ◽  
L D Byers
Keyword(s):  
Isotope Effect ◽  
Rate Constant ◽  
Ph Dependence ◽  
Thiol Group ◽  
Order Rate Constant ◽  
Acidic Group ◽  
Irreversible Inhibitors ◽  
Effects Of Ph ◽  
Solvent Isotope ◽  
Bell Shaped Curve

Two new alkylating reagents, chloro- and bromo-acetylphosphonate, were found to be very effective thiol-blocking reagents. The pH-dependence of the reaction of BAP with 2,4-dinitrothiophenol (25 degrees C, I 0.5) shows a tailing bell-shaped curve (with a plateau at high pH) characteristic of two ionizing groups: the thiol group (pKa 3.2) and the phosphonate group (pKa2 4.6). The rate constant for the reaction of the monoanionic inhibitor with dinitrothiophenolate (k2 = 7 M-1.s-1) is 120 times larger than that of the dianionic species. The haloacetylphosphonates were found to be irreversible inhibitors of glyceraldehyde-3-phosphate dehydrogenase from a variety of sources. They react with the active-site thiol group (Cys-149) and are half-site reagents with yeast glyceraldehyde-3-phosphate dehydrogenase. Thus, when two of the identical four subunits are modified the enzyme is catalytically inactive. The effects of pH (7-10), 2H2O and NAD+ on the reaction with the yeast enzyme were examined in detail. NAD+ enhances the alkylation rates. The second-order rate constant does not show a simple sigmoidal dependence on pH but rather a tailing bell-shaped curve (pKa 7.0 and 8.4) qualitatively similar to that obtained with dinitrothiophenol. There is no significant solvent isotope effect on the limiting rate constants and a normal isotope effect on the two pKa values. The results are consistent with the more reactive enzyme species containing a thiolate and an acidic group that may either donate a proton to the dianionic haloacetylphosphonate or orient the inhibitor.

scholarly journals The reactivities and ionization properties of the active-site dithiol groups of mammalian protein disulphide-isomerase

1991 ◽  
Vol 275 (2) ◽  
pp. 335-339 ◽  
Author(s):  
H C Hawkins ◽  
R B Freedman
Keyword(s):  
Rate Constant ◽  
Ph Dependence ◽  
Order Rate Constant ◽  
Second Order ◽  
Native Enzyme ◽  
Liver Protein ◽  
Thiol Groups ◽  
Protein Disulphide Isomerase ◽  
Order Rate ◽  
Reactive Groups

1. The number of reactive thiol groups in mammalian liver protein disulphide-isomerase (PDI) in various conditions was investigated by alkylation with iodo[14C]acetate. 2. Both the native enzyme, as isolated, and the urea-denatured enzyme contained negligible reactive thiol groups; the enzyme reduced with dithiothreitol contained two groups reactive towards iodoacetic acid at pH 7.5, and up to five reactive groups were detectable in the reduced denatured enzyme. 3. Modification of the two reactive groups in the reduced native enzyme led to complete inactivation, and the relationship between the loss of activity and the extent of modification was approximately linear. 4. Inactivation of PDI by alkylation of the reduced enzyme followed pseudo-first-order kinetics; a plot of the pH-dependence of the second-order rate constant for inactivation indicated that the essential reactive groups had a pK of 6.7 and a limiting second-order rate constant at high pH of 11 M-1.s-1. 5. Since sequence data on PDI show the presence within the polypeptide of two regions closely similar to thioredoxin, the data strongly indicate that these regions are chemically and functionally equivalent to thioredoxin. 6. The activity of PDI in thiol/disulphide interchange derives from the presence of vicinal dithiol groups in which one thiol group of each pair has an unusually low pK and high nucleophilic reactivity at physiological pH.

INTERACTION OF PLASMIN WITH ALPHA-2 MACROGLOBULIN (α2 M): EFFECT OF ANTIFIBRINOLYTIC AGENTS

1987 ◽  
Author(s):  
J Steiner ◽  
D Strickland
Keyword(s):  
Rate Constant ◽  
Conformational Changes ◽  
Binding Sites ◽  
Second Order ◽  
Kinetic Constants ◽  
Association Rate ◽  
Antifibrinolytic Agents ◽  
Nonspecific Proteolysis ◽  
Kinetics Of ◽  
Plasmin Inhibitor

Harpel (Harpel, P.C. (1981) J. Clin. Invest 68, 46-55) reported that levels of α2M-plasmin complexes are elevated in patients receiving urokinase. He found that the distribution of plasmin between the two inhibitors, α2M and α2-plasmin inhibitor (α2PI) is dependent upon whether plasmin is added directly to plasma, or whether plasminogen in plasma is activated to plasmin by urokinase. In order to investigate possible mechanisms regulating the distribution of plasmin between these two inhibitors, a study was initiated to examine the effects of antifibrinolytic agents on the reaction of plasmin with α2M. The kinetics of the reaction were measured by monitoring conformational changes in the inhibitor resulting from exomplex formation. In order to minimize nonspecific proteolysis of the inhibitor by plasmin, the reaction was performed under conditions where the concentration of α2M was greater than that of the enzyme. The reaction between Lys77-plasmin and α2M followed second order kinetics with a rate constant of 1.8 X 105M-1 s-1. This rate was not affected 1 mM EACA or by 10 uM histidine rich glycoprotein (HRG). Further, it was found that the rate of Val442-plasmin was essentially the same as that found for Lys77-plasmin. Therefore, the binding of these ligands to the lysine binding sites of plasmin do not affect the association rate between plasmin and α2M. This is in contrast to the reaction of plasmin with α2-PI, where the binding of ligands to the lysine binding sites of plasmin reduce the rate of the reaction (Petersen & Clerrmensen (1981) Biochem. J. 199, 121-127). The kinetic constants measured predict that under conditions when the lysine binding sites of plasmin are occupied, α2M will effectively compete with α2PI in inhibiting plasmin. Further, these studies inplicate HRG as a molecule capable of regulating the distribution of plasmin between these two inhibitors.

Kinetics of reconstitution of apotyrosinase by copper

1990 ◽  
Vol 68 (2) ◽  
pp. 476-479
Author(s):  
Donald C. Wigfield ◽  
Douglas M. Goltz
Keyword(s):  
Rate Constant ◽  
Copper Concentration ◽  
Copper Ions ◽  
Copper Ion ◽  
Order Rate Constant ◽  
First Order ◽  
Order Rate ◽  
Pseudo First Order ◽  
Rate Limiting ◽  
Kinetics Of

The kinetics of the reconstitution reaction of apotyrosinase with copper (II) ions are reported. The reaction is pseudo first order with respect to apoenzyme and the values of these pseudo first order rate constants are reported as a function of copper (II) concentration. Two copper ions bind to apoenzyme, and if the second one is rate limiting, the kinetically relevant copper concentration is the copper originally added minus the amount used in binding the first copper ion to enzyme. This modified copper concentration is linearly related to the magnitude of the pseudo first order rate constant, up to a copper concentration of 1.25 × 10−4 M (10-fold excess), giving a second order rate constant of 7.67 × 102 ± 0.93 × 102 M−1∙s−1.Key words: apotyrosinase, copper, tyrosinase.

Open-chain nitrogen compounds. Part XV. A kinetic study of the hydrolysis of 1-aryl-3-aryloxymethyl-3-methyltriazenes and related triazenes

1992 ◽  
Vol 70 (8) ◽  
pp. 2224-2233 ◽  
Author(s):  
Keith Vaughan ◽  
Donald L. Hooper ◽  
Marcus P. Merrin
Keyword(s):  
Rate Constant ◽  
Order Rate Constant ◽  
Buffer System ◽  
Open Chain ◽  
Nucleophilic Displacement ◽  
Ether Oxygen ◽  
Rate Of Hydrolysis ◽  
Electron Withdrawing Group ◽  
Ph Range ◽  
Kinetics Of

The kinetics of hydyrolysis of a series of 1-aryl-3-aryloxymethyl-3-methyltriazenes, Ar-N=N-NMe-CH2OAr′, was studied over the pH range 2–7.5. Reactions were followed by the change in UV absorbance spectra of the triazenes. The aryloxymethyltriazenes decompose more slowly at pH 7.5 than the hydroxymethyltriazenes, Ar-N=NMe-CH2OH; the hydrolysis is favoured by the presence of an electron-withdrawing group in Ar′. A mixed isopropanol/buffer system was developed in order to improve solubility of the aryloxymethyl triazenes. Lowering the pH caused an increase in the rate of hydrolysis and under strongly acidic conditions an electron-withdrawing group in Ar′ actually slows down the reaction. A Hammett plot of the pseudo-first-order rate constant, kobs, is curved, indicating that two or more mechanisms operate simultaneously and that the contribution of each mechanism is substituent-dependent. A plot of kobs vs. [buffer] is linear; the slope of the plot affords the rate constant, kb for the buffer-catalyzed reaction for each substituent. A Hammett plot of kb vs. σ is linear with ρ = +0.55, suggesting that the buffer-catalyzed reaction involves nucleophilic displacement of the phenoxy group by the buffer anion. Further analysis afforded the specific acid-catalyzed rate constants, [Formula: see text], for each substituent; this component of the reaction has a negative ρ, consistent with a mechanism involving protonation at the ether oxygen. The postulation that specific acid catalysis is a component of the reaction mechanism was confirmed by the observation of a solvent deuterium isotope effect, 2.28 > kH/kD > 1.60. Only the p-NO2 and p-CN phenyloxymethyltriazenes showed any spontaneous decomposition.

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