Towards an understanding of microtubule function and cell organization: an overview

1992 ◽  
Vol 70 (10-11) ◽  
pp. 835-841 ◽  
Author(s):  
Thomas H. MacRae
Keyword(s):  
Dynamic Instability ◽  
Functional Integration ◽  
Structural Protein ◽  
Microtubule Associated Proteins ◽  
Microtubule Stability ◽  
Microtubule Polarity ◽  
Tubulin Isoforms ◽  
Associated Proteins ◽  
Cell Organization ◽  
Cellular Components

Microtubules exhibit dynamic instability, converting abruptly between assembly and disassembly with continued growth dependent on the presence of a tubulin–GTP cap at the plus end of the organelle. Tubulin, the main structural protein of microtubules, is a heterodimer composed of related polypeptides termed α-tubulin and β-tubulin. Most eukaryotic cells possess several isoforms of the α- and β-tubulins, as well as γ-tubulin, an isoform restricted to the centrosome. The isoforms of tubulin arise either as the products of different genes or by posttranslational processes and their synthesis is subject to regulation. Tubulin isoforms coassemble with one another and isoform composition does not appear to determine whether a microtubule is able to carry out one particular activity or another. However, the posttranslational modification of polymerized tubulin may provide chemical signals which designate microtubules for a certain function. Microtubules interact with proteins called microtubule-associated proteins (MAPs) and they can be divided into two groups. The structural MAPs stimulate tubulin assembly, enhance microtubule stability, and influence the spatial distribution of microtubules within cells. The dynamic MAPs take advantage of microtubule polarity and organization to vectorially translocate cellular components. The interactions between microtubules and MAPs contribute to the structural–functional integration that characterizes eukaryotic cells.Key words: tubulin, microtubules, microtubule-associated proteins.

scholarly journals Generation of microtubule stability subclasses by microtubule-associated proteins: implications for the microtubule "dynamic instability" model.

1985 ◽  
Vol 101 (5) ◽  
pp. 1680-1689 ◽  
Author(s):  
D Job ◽  
M Pabion ◽  
R L Margolis
Keyword(s):  
Dynamic Instability ◽  
Protein Activity ◽  
Microtubule Dynamic ◽  
Microtubule Associated Proteins ◽  
Microtubule Stability ◽  
Low Concentrations ◽  
Protein Map ◽  
Associated Proteins ◽  
Specific Influence ◽  
Assay Conditions

We have developed a method to distinguish microtubule associated protein (MAP)-containing regions from MAP-free regions within a microtubule, or within microtubule sub-populations. In this method, we measure the MAP-dependent stabilization of microtubule regions to dilution-induced disassembly of the polymer. The appropriate microtubule regions are identified by assembly in the presence of [3H]GTP, and assayed by filter trapping and quantitation of microtubule regions that contain label. We find that MAPs bind very rapidly to polymer binding sites and that they do not exchange from these sites measurably once bound. Also, very low concentrations of MAPs yield measurable stabilization of local microtubule regions. Unlike the stable tubule only polypeptide (STOP) proteins, MAPs do not exhibit any sliding behavior under our assay conditions. These results predict the presence of different stability subclasses of microtubules when MAPs are present in less than saturating amounts. The data can readily account for the observed "dynamic instability" of microtubules through unequal MAP distributions. Further, we report that MAP dependent stabilization is quantitatively reversed by MAP phosphorylation, but that calmodulin, in large excess, has no specific influence on MAP protein activity when MAPs are on microtubules.

Analysis of the Mechanism of Microtubule Dynamic Instability Using a UV Microbeam to Sever Elongating Microtubules

1988 ◽  
Vol 46 ◽  
pp. 122-123
Author(s):  
R.A Walker ◽  
S. Inoue ◽  
E.D. Salmon
Keyword(s):  
Dynamic Instability ◽  
Microtubule Dynamic ◽  
Gtp Hydrolysis ◽  
Abrupt Transition ◽  
Microtubule Associated Proteins ◽  
Asymmetrical Structure ◽  
Associated Proteins

Microtubules polymerized in vitro from tubulin purified free of microtubule-associated proteins exhibit dynamic instability (1,2,3). Free microtubule ends exist in persistent phases of elongation or rapid shortening with infrequent, but, abrupt transitions between these phases. The abrupt transition from elongation to rapid shortening is termed catastrophe and the abrupt transition from rapid shortening to elongation is termed rescue. A microtubule is an asymmetrical structure. The plus end grows faster than the minus end. The frequency of catastrophe of the plus end is somewhat greater than the minus end, while the frequency of rescue of the plus end in much lower than for the minus end (4).The mechanism of catastrophe is controversial, but for both the plus and minus microtubule ends, catastrophe is thought to be dependent on GTP hydrolysis. Microtubule elongation occurs by the association of tubulin-GTP subunits to the growing end. Sometime after incorporation into an elongating microtubule end, the GTP is hydrolyzed to GDP, yielding a core of tubulin-GDP capped by tubulin-GTP (“GTP-cap”).

Modulation of microtubule dynamic instability in vivo by brain microtubule associated proteins

1995 ◽  
Vol 108 (4) ◽  
pp. 1679-1689 ◽  
Author(s):  
R. Dhamodharan ◽  
P. Wadsworth
Keyword(s):  
Dynamic Behavior ◽  
Dynamic Instability ◽  
Average Rate ◽  
Stable Maps ◽  
Microtubule Dynamic ◽  
Unit Distance ◽  
Microtubule Associated Proteins ◽  
Heat Stable ◽  
Associated Proteins

Heat-stable brain microtubule associated proteins (MAPs) and purified microtubule associated protein 2 (MAP-2) were microinjected into cultured BSC-1 cells which had been previously injected with rhodamine-labeled tubulin. The dynamic instability behavior of individual microtubules was then examined using low-light-level fluorescence microscopy and quantitative microtubule tracking methods. Both MAP preparations suppressed microtubule dynamics in vivo, by reducing the average rate and extent of both growing and shortening events. The average duration of growing events was not affected. When measured as events/unit time, heat-stable MAPs and MAP-2 did not significantly alter the frequency of rescue; the frequency of catastrophe was decreased approximately two-fold by heat-stable MAPs and MAP-2. When transition frequencies were calculated as events/unit distance, both MAP preparations increased the frequency of rescue, without altering the frequency of catastrophe. The percentage of total time spent in the phases of growth, shrink and pause was determined. Both MAP-2 and heat-stable MAPs decreased the percentage of time spent shortening, increased the percentage of time spent paused, and had no effect on percentage of time spent growing. Heat-stable MAPs increased the average pause duration, decreased the average number of events per minute per microtubule and increased the probability that a paused microtubule would switch to growing rather than shortening. The results demonstrate that addition of MAPs to living cells reduces the dynamic behavior of individual microtubules primarily by suppressing the magnitude of dynamic events and increasing the time spent in pause, where no change in the microtubule length can be detected. The results further suggest that the expression of MAPs directly contributes to cell type-specific microtubule dynamic behavior.

scholarly journals Dynamics of microtubules from erythrocyte marginal bands.

1993 ◽  
Vol 4 (3) ◽  
pp. 323-335 ◽  
Author(s):  
B Trinczek ◽  
A Marx ◽  
E M Mandelkow ◽  
D B Murphy ◽  
E Mandelkow
Keyword(s):  
Phosphate Buffer ◽  
Dynamic Instability ◽  
Critical Concentration ◽  
Mammalian Brain ◽  
Tubulin Isoforms ◽  
Marginal Band ◽  
Associated Proteins ◽  
Free Microtubules ◽  
The Difference ◽  
Brain Microtubules

Microtubules can adjust their length by the mechanism of dynamic instability, that is by switching between phases of growth and shrinkage. Thus far this phenomenon has been studied with microtubules that contain several components, that is, a mixture of tubulin isoforms, with or without a mixture of microtubule-associated proteins (MAPs), which can act as regulators of dynamic instability. Here we concentrate on the influence of the tubulin component. We have studied MAP-free microtubules from the marginal band of avian erythrocytes and compared them with mammalian brain microtubules. The erythrocyte system was selected because it represents a naturally stable aggregate of microtubules; second, the tubulin is largely homogeneous, in contrast to brain tubulin. Qualitatively, erythrocyte microtubules show similar features as brain microtubules, but they were found to be much less dynamic. The critical concentration of elongation, and the rates of association and dissociation of tubulin are all lower than with brain microtubules. Catastrophes are rare, rescues frequent, and shrinkage slow. This means that dynamic instability can be controlled by the tubulin isotype, independently of MAPs. Moreover, the extent of dynamic behavior is highly dependent on buffer conditions. In particular, dynamic instability is strongly enhanced in phosphate buffer, both for erythrocyte marginal band and brain microtubules. The lower stability in phosphate buffer argues against the hypothesis that a cap of tubulin.GDP.Pi subunits stabilizes microtubules. The difference in dynamics between tubulin isotypes and between the two ends of microtubules is preserved in the different buffer systems.

scholarly journals The structured core of human β tubulin confers isotype-specific polymerization properties

2016 ◽  
Vol 213 (4) ◽  
pp. 425-433 ◽  
Author(s):  
Melissa C. Pamula ◽  
Shih-Chieh Ti ◽  
Tarun M. Kapoor
Keyword(s):  
Dynamic Instability ◽  
Sequence Divergence ◽  
Regulatory Proteins ◽  
Microtubule Dynamic ◽  
Microtubule Associated Proteins ◽  
Cytoskeleton Organization ◽  
Wide Range ◽  
Associated Proteins ◽  
And Function ◽  
Β Tubulin

Diversity in cytoskeleton organization and function may be achieved through variations in primary sequence of tubulin isotypes. Recently, isotype functional diversity has been linked to a “tubulin code” in which the C-terminal tail, a region of substantial sequence divergence between isotypes, specifies interactions with microtubule-associated proteins. However, it is not known whether residue changes in this region alter microtubule dynamic instability. Here, we examine recombinant tubulin with human β isotype IIB and characterize polymerization dynamics. Microtubules with βIIB have catastrophe frequencies approximately threefold lower than those with isotype βIII, a suppression similar to that achieved by regulatory proteins. Further, we generate chimeric β tubulins with native tail sequences swapped between isotypes. These chimeras have catastrophe frequencies similar to that of the corresponding full-length construct with the same core sequence. Together, our data indicate that residue changes within the conserved β tubulin core are largely responsible for the observed isotype-specific changes in dynamic instability parameters and tune tubulin’s polymerization properties across a wide range.

scholarly journals The microtubule lattice and plus-end association of Drosophila Mini spindles is spatially regulated to fine-tune microtubule dynamics

2011 ◽  
Vol 22 (22) ◽  
pp. 4343-4361 ◽  
Author(s):  
Joshua D. Currie ◽  
Shannon Stewman ◽  
Gregory Schimizzi ◽  
Kevin C. Slep ◽  
Ao Ma ◽  
...  
Keyword(s):  
Dynamic Instability ◽  
Function Analysis ◽  
Microtubule Dynamics ◽  
Cell Periphery ◽  
Cell Interior ◽  
Microtubule Associated Proteins ◽  
Contact Sites ◽  
Associated Proteins ◽  
Fine Tune

Individual microtubules (MTs) exhibit dynamic instability, a behavior in which they cycle between phases of growth and shrinkage while the total amount of MT polymer remains constant. Dynamic instability is promoted by the conserved XMAP215/Dis1 family of microtubule-associated proteins (MAPs). In this study, we conducted an in vivo structure–function analysis of the Drosophila homologue Mini spindles (Msps). Msps exhibits EB1-dependent and spatially regulated MT localization, targeting to microtubule plus ends in the cell interior and decorating the lattice of growing and shrinking microtubules in the cell periphery. RNA interference rescue experiments revealed that the NH2-terminal four TOG domains of Msps function as paired units and were sufficient to promote microtubule dynamics and EB1 comet formation. We also identified TOG5 and novel inter-TOG linker motifs that are required for targeting Msps to the microtubule lattice. These novel microtubule contact sites are necessary for the interplay between the conserved TOG domains and inter-TOG MT binding that underlies the ability of Msps to promote MT dynamic instability.

scholarly journals Polarity orientation and assembly process of microtubule bundles in nocodazole-treated, MAP2c-transfected COS cells.

1995 ◽  
Vol 6 (8) ◽  
pp. 981-996 ◽  
Author(s):  
R Takemura ◽  
S Okabe ◽  
T Umeyama ◽  
N Hirokawa
Keyword(s):  
Electron Microscope ◽  
Model System ◽  
Sf9 Cells ◽  
Assembly Process ◽  
Microtubule Associated Proteins ◽  
Cos Cells ◽  
Microtubule Polarity ◽  
Neuronal Processes ◽  
Associated Proteins ◽  
Peripheral Cytoplasm

Microtubule bundles reminiscent of those found in neuronal processes are formed in fibroblasts and Sf9 cells that are transfected with the microtubule-associated proteins tau, MAP2, or MAP2c. To analyze the assembly process of these bundles and its relation to the microtubule polarity, we depolymerized the bundles formed in MAP2c-transfected COS cells using nocodazole, and observed the process of assembly of microtubule bundles after removal of the drug in cells microinjected with rhodamine-labeled tubulin. Within minutes of its removal, numerous short microtubule fragments were observed throughout the cytoplasm. These short fragments were randomly oriented and were already bundled. Somewhat longer, but still short bundles, were then found in the peripheral cytoplasm. These bundles became the primordium of the larger bundles, and gradually grew in length and width. The polarity orientation of microtubules in the reformed bundle as determined by "hook" procedure using electron microscope was uniform with the plus end distal to the cell nucleus. The results suggest that some mechanism(s) exists to orient the polarity of microtubules, which are not in direct continuity with the centrosome, during the formation of large bundles. The observed process presents a useful model system for studying the organization of microtubules that are not directly associated with the centrosomes, such as those observed in axons.

scholarly journals Dynamic instability of individual microtubules analyzed by video light microscopy: rate constants and transition frequencies.

1988 ◽  
Vol 107 (4) ◽  
pp. 1437-1448 ◽  
Author(s):  
R A Walker ◽  
E T O'Brien ◽  
N K Pryer ◽  
M F Soboeiro ◽  
W A Voter ◽  
...  
Keyword(s):  
Rate Constants ◽  
Dynamic Instability ◽  
Dissociation Rate ◽  
Microtubule Associated Proteins ◽  
First Order ◽  
Associated Proteins ◽  
Dissociation Rate Constants ◽  
Elongation Phase ◽  
Association Rate Constants ◽  
Brain Tubulin

We have developed video microscopy methods to visualize the assembly and disassembly of individual microtubules at 33-ms intervals. Porcine brain tubulin, free of microtubule-associated proteins, was assembled onto axoneme fragments at 37 degrees C, and the dynamic behavior of the plus and minus ends of microtubules was analyzed for tubulin concentrations between 7 and 15.5 microM. Elongation and rapid shortening were distinctly different phases. At each end, the elongation phase was characterized by a second order association and a substantial first order dissociation reaction. Association rate constants were 8.9 and 4.3 microM-1 s-1 for the plus and minus ends, respectively; and the corresponding dissociation rate constants were 44 and 23 s-1. For both ends, the rate of tubulin dissociation equaled the rate of tubulin association at 5 microM. The rate of rapid shortening was similar at the two ends (plus = 733 s-1; minus = 915 s-1), and did not vary with tubulin concentration. Transitions between phases were abrupt and stochastic. As the tubulin concentration was increased, catastrophe frequency decreased at both ends, and rescue frequency increased dramatically at the minus end. This resulted in fewer rapid shortening phases at higher tubulin concentrations for both ends and shorter rapid shortening phases at the minus end. At each concentration, the frequency of catastrophe was slightly greater at the plus end, and the frequency of rescue was greater at the minus end. Our data demonstrate that microtubules assembled from pure tubulin undergo dynamic instability over a twofold range of tubulin concentrations, and that the dynamic instability of the plus and minus ends of microtubules can be significantly different. Our analysis indicates that this difference could produce treadmilling, and establishes general limits on the effectiveness of length redistribution as a measure of dynamic instability. Our results are consistent with the existence of a GTP cap during elongation, but are not consistent with existing GTP cap models.

WIPI2b and Atg16L1: setting the stage for autophagosome formation

2014 ◽  
Vol 42 (5) ◽  
pp. 1327-1334 ◽  
Author(s):  
Michael I. Wilson ◽  
Hannah C. Dooley ◽  
Sharon A. Tooze
Keyword(s):  
Endoplasmic Reticulum ◽  
Regulatory Network ◽  
Recent Progress ◽  
Direct Interaction ◽  
Related Protein ◽  
Autophagosome Formation ◽  
Microtubule Associated Proteins ◽  
Cellular Energy ◽  
Associated Proteins ◽  
Cellular Components

The double-membraned autophagosome organelle is an integral part of autophagy, a process that recycles cellular components by non-selectively engulfing and delivering them to lysosomes where they are digested. Release of metabolites from this process is involved in cellular energy homoeostasis under basal conditions and during nutrient starvation. Selective engulfment of protein aggregates and dysfunctional organelles by autophagosomes also prevents disruption of cellular metabolism. Autophagosome formation in animals is crucially dependent on the unique conjugation of a group of ubiquitin-like proteins in the microtubule-associated proteins 1A/1B light chain 3 (LC3) family to the headgroup of phosphatidylethanolamine (PE) lipids. LC3 lipidation requires a cascade of ubiquitin-like ligase and conjugation enzymes. The present review describes recent progress and discovery of the direct interaction between the PtdIns3P effector WIPI2b and autophagy-related protein 16-like 1 (Atg16L1), a component of the LC3-conjugation complex. This interaction makes the link between endoplasmic reticulum (ER)-localized production of PtdIns3P, triggered by the autophagy regulatory network, and recruitment of the LC3-conjugation complex crucial for autophagosome formation.

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