Quaternary Nitrogen Heterocycles. II. Kinetics of Reversible Pseudobase Formation from N-Methyl Heterocyclic Cations

1973 ◽  
Vol 51 (12) ◽  
pp. 1965-1972 ◽  
Author(s):  
John W. Bunting ◽  
William G. Meathrel
Keyword(s):  
Isotope Effects ◽  
Nitrogen Heterocycles ◽  
Activation Parameters ◽  
Hydroxide Ion ◽  
Quaternary Nitrogen ◽  
Equilibrium And Kinetics ◽  
Temperature Dependences ◽  
Deuterium Isotope Effects ◽  
Heterocyclic Cations ◽  
Kinetics Of

The kinetics of the formation and decomposition of the pseudobases from the 2-methyl-4-nitroisoquinolinium, 10-methylacridinium, and 10-methyl-9-phenylacridinium ions have been studied. The pH–rate profiles of these reactions indicate that for each of these ions, pseudobase formation may kinetically involve either attack of a water molecule or of hydroxide ion on the heterocyclic cation depending upon the pH of the reaction. Pseudobase decomposition to the cation may occur through either the neutral or protonated pseudobase species or their kinetic equivalents. The temperature dependences of the equilibrium and kinetics are reported for each ion, and deuterium isotope effects for the reactions of the 2-methyl-4-nitroisoquinolinium ion have been measured. Possible mechanisms for the reactions are discussed on the basis of the observed activation parameters and isotope effects and are compared with related reactions.

The kinetics, isotope effects, and mechanism of the reaction of 2,2-di(4-nitrophenyl)-1,1,1-trifluoroethane with alkoxide bases in alcohol solvents

1985 ◽  
Vol 63 (3) ◽  
pp. 576-580 ◽  
Author(s):  
Arnold Jarczewski ◽  
Grzegorz Schroeder ◽  
Wlodzimierz Galezowski ◽  
Kenneth T. Leffek ◽  
Urszula Maciejewska
Keyword(s):  
Rate Constants ◽  
Isotope Effects ◽  
Activation Parameters ◽  
Tert Butanol ◽  
Deuterium Isotope Effects ◽  
Alcohol Solvents ◽  
Multistep Reaction ◽  
Mechanism Of The Reaction

The reaction between 2,2-di(4-nitrophenyl)-1,1,1-trifluoroethane and the alkoxide bases ŌCH3, ŌC2H5, ŌnC4H9, ŌCH(CH3)2, and ŌC(CH3)3 in their corresponding alcohol solvents is a multistep reaction with several intermediates: 2,2-di(4-nitrophenyl)-1,1-difluoro-1-alkoxyethane (A), 2,2-di(4-nitrophenyl)-1-fluoro-1-alkoxyethene (B), 2,2-di(4-nitrophenyl)-1,1-dialkoxyethene (C), 2,2-di(4-nitrophenyl)-1,1-difluoroethene (D), and 4,4′-dinitrobenzophene (E). Rate constants and activation parameters have been measured for the appearance of the two stable products B and C. The kinetic deuterium isotope effects for the appearance of B fell in the range of kH/kD = 1 to 2 at 25 °C for the primary and secondary alkoxides, whereas kH/kD = 5.4 at 30 °C for the appearance of D with tert-butoxide. Exchange experiments showed that H/D exchange took place between the substrate and solvent to the extent of 100% with methoxide, 50% with ethoxide and isopropoxide, and 0% with tert-butoxide. It is concluded the HF elimination from the substrate follows an (ElcB)R mechanism with methoxide/methanol, changing to (ElcB)I or E2 with tert-butoxide/tert-butanol.

scholarly journals The role of enzyme dynamics and tunnelling in catalysing hydride transfer: studies of distal mutants of dihydrofolate reductase

2006 ◽  
Vol 361 (1472) ◽  
pp. 1307-1315 ◽  
Author(s):  
Lin Wang ◽  
Nina M Goodey ◽  
Stephen J Benkovic ◽  
Amnon Kohen
Keyword(s):  
Temperature Dependence ◽  
Dihydrofolate Reductase ◽  
Isotope Effects ◽  
Hydride Transfer ◽  
Activation Parameters ◽  
Physical Nature ◽  
Enzyme Dynamics ◽  
Temperature Dependences ◽  
Donor Acceptor ◽  
Significant Temperature

Residues M42 and G121 of Escherichia coli dihydrofolate reductase ( ec DHFR) are on opposite sides of the catalytic centre (15 and 19 Å away from it, respectively). Theoretical studies have suggested that these distal residues might be part of a dynamics network coupled to the reaction catalysed at the active site. The ec DHFR mutant G121V has been extensively studied and appeared to have a significant effect on rate, but only a mild effect on the nature of H-transfer. The present work examines the effect of M42W on the physical nature of the catalysed hydride transfer step. Intrinsic kinetic isotope effects (KIEs), their temperature dependence and activation parameters were studied. The findings presented here are in accordance with the environmentally coupled hydrogen tunnelling. In contrast to the wild-type (WT), fluctuations of the donor–acceptor distance were required, leading to a significant temperature dependence of KIEs and deflated intercepts. A comparison of M42W and G121V to the WT enzyme revealed that the reduced rates, the inflated primary KIEs and their temperature dependences resulted from an imperfect potential surface pre-arrangement relative to the WT enzyme. Apparently, the coupling of the enzyme's dynamics to the reaction coordinate was altered by the mutation, supporting the models in which dynamics of the whole protein is coupled to its catalysed chemistry.

scholarly journals KINETICS OF OZONE REACTIONS WITH ADENINE AND CYTOSINE IN AQUEOUS SOLUTIONS

2020 ◽  
Vol 63 (10) ◽  
pp. 17-22
Author(s):  
Aigul A. Maksyutova ◽  
Elvina R. Khaynasova ◽  
Yuriy S. Zimin
Keyword(s):  
Aqueous Solutions ◽  
Rate Constants ◽  
Correlation Coefficients ◽  
Activation Parameters ◽  
Second Order ◽  
Order Kinetic ◽  
Temperature Dependences ◽  
Ozone Reactivity ◽  
Kinetics Of ◽  
Ozone Reactions

The ultraviolet spectroscopy method has been applied to study the kinetics of the ozone reactions with nitrogenous bases (NB), namely adenine and cytosine in aqueous solutions. At the first research stage, the range of NB working concentrations has been determined. It was found that linear dependences between optical densities and concentrations of nitrogenous bases aqueous solutions are quite reliable, with correlation coefficients r ≥ 0.998, are satisfied up to [NB] = 2.3 ∙ 10–4 mol/l. According to the Bouguer-Lambert-Beer law, adenine and cytosine extinction coefficients in aqueous solutions were determined and subsequently used to calculate their residual concentrations. At the next stage, the kinetics of nitrogenous bases ozonized oxidation was studied with equal initial concentrations of the starting substances ([NB]0 = [О3]0). The results revealed that the kinetic consumption curves of the starting reagents are fairly well linearized (r ≥ 0.996) in the second-order reaction equation coordinates. As found with the bubbling installation, 1 mol of the absorbed ozone falls on 1 mol of the used NB. Thus, the reactions of ozone with adenine and cytosine explicitly proceed according to the second-order kinetic laws (the first – according to О3 and the first – according to NB). The rate constants were calculated by the integral reaction equations, the values of which indicate a higher ozone reactivity in relation to nitrogen bases. The temperature dependences of the second-order rate constants was studied ranging 285-309 K, and the activation parameters (pre-exponential factors and activation energies) of the ozone reactions with adenine and cytosine in aqueous solutions were determined.

Studies on Hydrogen–Oxygen Systems in the Electrical Discharge. VII. Deuterium Isotope Effects in the Chemistry of the Hydrogen Polyoxides

1975 ◽  
Vol 53 (16) ◽  
pp. 2490-2497 ◽  
Author(s):  
José L. Arnau ◽  
Paul A. Giguère
Keyword(s):  
Hydrogen Peroxide ◽  
Electrical Discharge ◽  
Microwave Discharge ◽  
Isotope Effects ◽  
Cold Trap ◽  
Manometric Method ◽  
Deuterium Isotope Effects ◽  
Kinetics Of ◽  
Hydrogen Polyoxides ◽  
Hydrogen Peroxide Vapor

The kinetics of oxygen evolution on warming the trapped products (at −196 °C) from water or hydrogen peroxide vapor dissociated in a glow discharge were studied by the manometric method. Under closely controlled conditions it was possible to distinguish clearly the decomposition of the two intermediates, H2O3 and H2O4. The latter begins to decompose measurably following crystallization of the glassy solid at about −115°; the trioxide decomposes readily between −50 and −35°. Typically, the yields of H2O3 from dissociated water vapor were of the order of 3 to 5 mol%; those of H2O4, only about one-tenth as much. Varying the distance between the microwave discharge and the cold trap was found to affect differently the yields of the various products. Those of water and peroxide showed a simple, direct correlation; the minor constituents H2O3 and H2O4 followed entirely different patterns. Only a small fraction of the peroxide is formed via the H2O4 intermediate in these systems. Less water, and more of the higher oxides, were obtained from dissociated hydrogen peroxide than from water vapor.The deuterated systems showed some unusual isotope effects. The yields of D2O3 were always higher (up to twice and even more) than those of H2O3 under similar conditions. The other products showed little or no such effect, except for occluded oxygen and ozone which decreased by about half. Finally, the deuterium polyoxides decompose at slightly higher temperatures (10 to 15°) than their hydrogen analogs. Mechanisms are proposed for the formation and decomposition of the polyoxides.

The kinetics of proton and deuteron transfer from 1-(4-nitrophenyl)-1-nitroethane to1,8-diazabicyclo[5.4.0]undec-7-ene in aprotic solvents

1982 ◽  
Vol 60 (13) ◽  
pp. 1692-1695 ◽  
Author(s):  
Kenneth T. Leffek ◽  
Przemyslaw Pruszynski
Keyword(s):  
Energy Barrier ◽  
Reaction Rate ◽  
Significant Contribution ◽  
Transfer Reaction ◽  
Isotope Effects ◽  
Activation Parameters ◽  
Proton Transfer Reaction ◽  
Potential Energy Barrier ◽  
Deuteron Transfer ◽  
Kinetics Of

1-(4-Nitrophenyl)-1-nitroethane reacts with the base1,8-diazabicyclo[5.4.0]undec-7-ene (DBU) in both acetonitrile and toluene solvents in a normal second-order proton-transfer reaction, in contrast to its behaviour with the base 2,7-dimethoxy-1,8-bis(dimethylamino)naphthalene in acetonitrile.The primary isotope effect, kHlkD = 12.0 at 25° in toluene is very similar to that observed by other workers for the reaction of 4-nitrophenylnitromethane with DBU under the same conditions. In acetonitrile solvent a kHlkD ratio of 7.8 was found at 25 °C. The isotope effects on the activation parameters for the reaction in both solvents indicate that tunnelling of the proton through the potential energy barrier makes a significant contribution to the reaction rate.

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