Comparative metagenome analysis of an Alaskan glacier

2014 ◽  
Vol 12 (02) ◽  
pp. 1441003 ◽  
Author(s):  
Sulbha Choudhari ◽  
Ruchi Lohia ◽  
Andrey Grigoriev

The temperature in the Arctic region has been increasing in the recent past accompanied by melting of its glaciers. We took a snapshot of the current microbial inhabitation of an Alaskan glacier (which can be considered as one of the simplest possible ecosystems) by using metagenomic sequencing of 16S rRNA recovered from ice/snow samples. Somewhat contrary to our expectations and earlier estimates, a rich and diverse microbial population of more than 2,500 species was revealed including several species of Archaea that has been identified for the first time in the glaciers of the Northern hemisphere. The most prominent bacterial groups found were Proteobacteria, Bacteroidetes, and Firmicutes. Firmicutes were not reported in large numbers in a previously studied Alpine glacier but were dominant in an Antarctic subglacial lake. Representatives of Cyanobacteria, Actinobacteria and Planctomycetes were among the most numerous, likely reflecting the dependence of the ecosystem on the energy obtained through photosynthesis and close links with the microbial community of the soil. Principal component analysis (PCA) of nucleotide word frequency revealed distinct sequence clusters for different taxonomic groups in the Alaskan glacier community and separate clusters for the glacial communities from other regions of the world. Comparative analysis of the community composition and bacterial diversity present in the Byron glacier in Alaska with other environments showed larger overlap with an Arctic soil than with a high Arctic lake, indicating patterns of community exchange and suggesting that these bacteria may play an important role in soil development during glacial retreat.

2019 ◽  
Author(s):  
Matti O. Ruuskanen ◽  
Graham Colby ◽  
Kyra A. St.Pierre ◽  
Vincent L. St.Louis ◽  
Stéphane Aris-Brosou ◽  
...  

AbstractThe Arctic is currently warming at an unprecedented rate, which may affect environmental constraints on the freshwater microbial communities found there. Yet, our knowledge of the community structure and functional potential of High Arctic freshwater microbes remains poor, even though they play key roles in nutrient cycling and other ecosystem services. Here, using high-throughput metagenomic sequencing and genome assembly, we show that sediment microbial communities in the High Arctic’s largest lake by volume, Lake Hazen, are phylogenetically diverse, ranging from Proteobacteria, Verrucomicrobia, Planctomycetes, to members of the newly discovered Candidate Phyla Radiation (CPR) groups. These genomes displayed a high prevalence of pathways involved in lipid chemistry, and a low prevalence of nutrient uptake pathways, which might represent adaptations to the specific, cold (~3.5°C) and extremely oligotrophic conditions in Lake Hazen. Despite these potential adaptations, it is unclear how ongoing environmental changes will affect microbial communities, the makeup of their genomic idiosyncrasies, as well as the possible implications at higher trophic levels.


2022 ◽  
Vol 14 (2) ◽  
pp. 313
Author(s):  
Filippo Calì Quaglia ◽  
Daniela Meloni ◽  
Giovanni Muscari ◽  
Tatiana Di Iorio ◽  
Virginia Ciardini ◽  
...  

Boreal fires have increased during the last years and are projected to become more intense and frequent as a consequence of climate change. Wildfires produce a wide range of effects on the Arctic climate and ecosystem, and understanding these effects is crucial for predicting the future evolution of the Arctic region. This study focuses on the impact of the long-range transport of biomass-burning aerosol into the atmosphere and the corresponding radiative perturbation in the shortwave frequency range. As a case study, we investigate an intense biomass-burning (BB) event which took place in summer 2017 in Canada and subsequent northeastward transport of gases and particles in the plume leading to exceptionally high values (0.86) of Aerosol Optical Depth (AOD) at 500 nm measured in northwestern Greenland on 21 August 2017. This work characterizes the BB plume measured at the Thule High Arctic Atmospheric Observatory (THAAO; 76.53∘N, 68.74∘W) in August 2017 by assessing the associated shortwave aerosol direct radiative impact over the THAAO and extending this evaluation over the broader region (60∘N–80∘N, 110∘W–0∘E). The radiative transfer simulations with MODTRAN6.0 estimated an aerosol heating rate of up to 0.5 K/day in the upper aerosol layer (8–12 km). The direct aerosol radiative effect (ARE) vertical profile shows a maximum negative value of −45.4 Wm−2 for a 78∘ solar zenith angle above THAAO at 3 km altitude. A cumulative surface ARE of −127.5 TW is estimated to have occurred on 21 August 2017 over a portion (∼3.1×106 km2) of the considered domain (60∘N–80∘N, 110∘W–0∘E). ARE regional mean daily values over the same portion of the domain vary between −65 and −25 Wm−2. Although this is a limited temporal event, this effect can have significant influence on the Arctic radiative budget, especially in the anticipated scenario of increasing wildfires.


2018 ◽  
Vol 96 (3) ◽  
pp. 277-281 ◽  
Author(s):  
F. Dalerum ◽  
S. Freire ◽  
A. Angerbjörn ◽  
N. Lecomte ◽  
Å. Lindgren ◽  
...  

The grey wolf (Canis lupus Linnaeus, 1758) is one of the most widespread large carnivores on Earth, and occurs throughout the Arctic. Although wolf diet is well studied, we have scant information from high Arctic areas. Global warming is expected to increase the importance of predation for ecosystem regulation in Arctic environments. To improve our ability to manage Arctic ecosystems under environmental change, we therefore need knowledge about Arctic predator diets. Prey remains in 54 wolf scats collected at three sites in the high Arctic region surrounding the Hall Basin (Judge Daly Promontory, Ellesmere Island, Canada, and Washington Land and Hall Land, both in northwestern Greenland) pointed to a dietary importance of arctic hare (Lepus arcticus Ross, 1819; 55% frequency of occurrence) and muskoxen (Ovibos moschatus (Zimmermann, 1780); 39% frequency of occurrence), although we observed diet variation among the sites. A literature compilation suggested that arctic wolves (Canis lupus arctos Pocock, 1935) preferentially feed on caribou (Rangifer tarandus (Linnaeus, 1758)) and muskoxen, but can sustain themselves on arctic hares and Greenland collared lemmings (Dicrostonyx groenlandicus (Traill, 1823)) in areas with limited or no ungulate populations. We suggest that climate change may alter the dynamics among wolves, arctic hare, muskoxen, and caribou, and we encourage further studies evaluating how climate change influences predator–prey interactions in high Arctic environments.


Author(s):  
Larisa A. Pautova ◽  
Vladimir A. Silkin ◽  
Marina D. Kravchishina ◽  
Valeriy G. Yakubenko ◽  
Anna L. Chultsova

The structure of the summer planktonic communities of the Northern part of the Barents sea in the first half of August 2017 were studied. In the sea-ice melting area, the average phytoplankton biomass producing upper 50-meter layer of water reached values levels of eutrophic waters (up to 2.1 g/m3). Phytoplankton was presented by diatoms of the genera Thalassiosira and Eucampia. Maximum biomass recorded at depths of 22–52 m, the absolute maximum biomass community (5,0 g/m3) marked on the horizon of 45 m (station 5558), located at the outlet of the deep trench Franz Victoria near the West coast of the archipelago Franz Josef Land. In ice-free waters, phytoplankton abundance was low, and the weighted average biomass (8.0 mg/m3 – 123.1 mg/m3) corresponded to oligotrophic waters and lower mesotrophic waters. In the upper layers of the water population abundance was dominated by small flagellates and picoplankton from, biomass – Arctic dinoflagellates (Gymnodinium spp.) and cold Atlantic complexes (Gyrodinium lachryma, Alexandrium tamarense, Dinophysis norvegica). The proportion of Atlantic species in phytoplankton reached 75%. The representatives of warm-water Atlantic complex (Emiliania huxleyi, Rhizosolenia hebetata f. semispina, Ceratium horridum) were recorded up to 80º N, as indicators of the penetration of warm Atlantic waters into the Arctic basin. The presence of oceanic Atlantic species as warm-water and cold systems in the high Arctic indicates the strengthening of processes of “atlantificacion” in the region.


Author(s):  
Alexander Myasoedov ◽  
Alexander Myasoedov ◽  
Sergey Azarov ◽  
Sergey Azarov ◽  
Ekaterina Balashova ◽  
...  

Working with satellite data, has long been an issue for users which has often prevented from a wider use of these data because of Volume, Access, Format and Data Combination. The purpose of the Storm Ice Oil Wind Wave Watch System (SIOWS) developed at Satellite Oceanography Laboratory (SOLab) is to solve the main issues encountered with satellite data and to provide users with a fast and flexible tool to select and extract data within massive archives that match exactly its needs or interest improving the efficiency of the monitoring system of geophysical conditions in the Arctic. SIOWS - is a Web GIS, designed to display various satellite, model and in situ data, it uses developed at SOLab storing, processing and visualization technologies for operational and archived data. It allows synergistic analysis of both historical data and monitoring of the current state and dynamics of the "ocean-atmosphere-cryosphere" system in the Arctic region, as well as Arctic system forecasting based on thermodynamic models with satellite data assimilation.


2020 ◽  
pp. 024
Author(s):  
Rym Msadek ◽  
Gilles Garric ◽  
Sara Fleury ◽  
Florent Garnier ◽  
Lauriane Batté ◽  
...  

L'Arctique est la région du globe qui s'est réchauffée le plus vite au cours des trente dernières années, avec une augmentation de la température de surface environ deux fois plus rapide que pour la moyenne globale. Le déclin de la banquise arctique observé depuis le début de l'ère satellitaire et attribué principalement à l'augmentation de la concentration des gaz à effet de serre aurait joué un rôle important dans cette amplification des températures au pôle. Cette fonte importante des glaces arctiques, qui devrait s'accélérer dans les décennies à venir, pourrait modifier les vents en haute altitude et potentiellement avoir un impact sur le climat des moyennes latitudes. L'étendue de la banquise arctique varie considérablement d'une saison à l'autre, d'une année à l'autre, d'une décennie à l'autre. Améliorer notre capacité à prévoir ces variations nécessite de comprendre, observer et modéliser les interactions entre la banquise et les autres composantes du système Terre, telles que l'océan, l'atmosphère ou la biosphère, à différentes échelles de temps. La réalisation de prévisions saisonnières de la banquise arctique est très récente comparée aux prévisions du temps ou aux prévisions saisonnières de paramètres météorologiques (température, précipitation). Les résultats ayant émergé au cours des dix dernières années mettent en évidence l'importance des observations de l'épaisseur de la glace de mer pour prévoir l'évolution de la banquise estivale plusieurs mois à l'avance. Surface temperatures over the Arctic region have been increasing twice as fast as global mean temperatures, a phenomenon known as arctic amplification. One main contributor to this polar warming is the large decline of Arctic sea ice observed since the beginning of satellite observations, which has been attributed to the increase of greenhouse gases. The acceleration of Arctic sea ice loss that is projected for the coming decades could modify the upper level atmospheric circulation yielding climate impacts up to the mid-latitudes. There is considerable variability in the spatial extent of ice cover on seasonal, interannual and decadal time scales. Better understanding, observing and modelling the interactions between sea ice and the other components of the climate system is key for improved predictions of Arctic sea ice in the future. Running operational-like seasonal predictions of Arctic sea ice is a quite recent effort compared to weather predictions or seasonal predictions of atmospheric fields like temperature or precipitation. Recent results stress the importance of sea ice thickness observations to improve seasonal predictions of Arctic sea ice conditions during summer.


2018 ◽  
Vol 35 (4) ◽  
pp. 110-113
Author(s):  
V. A. Tupchienko ◽  
H. G. Imanova

The article deals with the problem of the development of the domestic nuclear icebreaker fleet in the context of the implementation of nuclear logistics in the Arctic. The paper analyzes the key achievements of the Russian nuclear industry, highlights the key areas of development of the nuclear sector in the Far North, and identifies aspects of the development of mechanisms to ensure access to energy on the basis of floating nuclear power units. It is found that Russia is currently a leader in the implementation of the nuclear aspect of foreign policy and in providing energy to the Arctic region.


2020 ◽  
Vol 33 (5) ◽  
pp. 480-489
Author(s):  
L. P. Golobokova ◽  
T. V. Khodzher ◽  
O. N. Izosimova ◽  
P. N. Zenkova ◽  
A. O. Pochyufarov ◽  
...  

2011 ◽  
Author(s):  
Chimerebere Onyekwere Nkwocha ◽  
Evgeny Glebov ◽  
Alexey Zhludov ◽  
Sergey Galantsev ◽  
David Kay

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