Protein Dynamics by Two-Dimensional Infrared Spectroscopy

2021 ◽  
Vol 14 (1) ◽  
pp. 299-321
Author(s):  
Goran W. Tumbic ◽  
Md Yeathad Hossan ◽  
Megan C. Thielges

Proteins function as ensembles of interconverting structures. The motions span from picosecond bond rotations to millisecond and longer subunit displacements. Characterization of functional dynamics on all spatial and temporal scales remains challenging experimentally. Two-dimensional infrared spectroscopy (2D IR) is maturing as a powerful approach for investigating proteins and their dynamics. We outline the advantages of IR spectroscopy, describe 2D IR and the information it provides, and introduce vibrational groups for protein analysis. We highlight example studies that illustrate the power and versatility of 2D IR for characterizing protein dynamics and conclude with a brief discussion of the outlook for biomolecular 2D IR.

The Analyst ◽  
2015 ◽  
Vol 140 (13) ◽  
pp. 4336-4349 ◽  
Author(s):  
Amanda L. Le Sueur ◽  
Rachel E. Horness ◽  
Megan C. Thielges

The potential of 2D IR spectroscopy is illustrated through select examples of recent applications in chemistry and biology.


The Analyst ◽  
2020 ◽  
Vol 145 (6) ◽  
pp. 2014-2024
Author(s):  
Robby Fritzsch ◽  
Samantha Hume ◽  
Lucy Minnes ◽  
Matthew J. Baker ◽  
Glenn A. Burley ◽  
...  

Recent progress in laser technology and data analysis methods has enabled high throughput applications of ultrafast two-dimensional infrared (2D-IR) spectroscopy measurements and opened the door to analytical applications.


1993 ◽  
Vol 47 (9) ◽  
pp. 1386-1389 ◽  
Author(s):  
Ray Hasegawa ◽  
Masanori Sakamoto ◽  
Hideyuki Sasaki

The dynamic behavior of a polymer-dispersed liquid crystal (PDLC) under an electric field has been studied by static and two-dimensional infrared spectroscopy. The PDLC sample was prepared by polymerization-induced phase separation of a mixture of nematic liquid crystal E7 and acrylate. 2D IR correlation analysis indicates that the rigid core of the liquid crystal molecules reorients as a unit, and suggests that the polymer side chain existing in the interface between the polymer and the liquid crystals may reorient in phase with the liquid crystal reorientation by interaction with the liquid crystal molecules.


2019 ◽  
Vol 21 (2) ◽  
pp. 780-788 ◽  
Author(s):  
Sashary Ramos ◽  
Rachel E. Horness ◽  
Jessica A. Collins ◽  
David Haak ◽  
Megan C. Thielges

The conformational heterogeneity and dynamics of protein side chains contribute to function, but investigating exactly how is hindered by experimental challenges arising from the fast timescales involved and the spatial heterogeneity of protein structures.


2012 ◽  
Vol 23 (6) ◽  
pp. 062001 ◽  
Author(s):  
Katrin Adamczyk ◽  
Marco Candelaresi ◽  
Kirsty Robb ◽  
Andrea Gumiero ◽  
Martin A Walsh ◽  
...  

2021 ◽  
Author(s):  
Dean N. Edun ◽  
Meredith R. Flanagan ◽  
Arnaldo L. Serrano

Two-dimensional infrared spectroscopy reveals folding of an intrinsically disordered peptide when sequestered into a model “membrane-less” organelle.


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