Abstract 374: Direct measurements of cellular ATP levels in tumor cell lines using real-time, quantitative live-cell analysis

Author(s):  
Cicely L. Schramm ◽  
Grigory S. Filonov ◽  
Michael L. Bowe ◽  
Yong X. Chen ◽  
Laura A. Skerlos ◽  
...  
2017 ◽  
Vol 25 (10) ◽  
pp. 881
Author(s):  
Chang-Zheng Liu ◽  
Xiao-Lei Jiao ◽  
Dun-Qin Gao ◽  
Long-Bin Xing ◽  
Hui Liu ◽  
...  

2007 ◽  
Vol 53 (1) ◽  
pp. 53-61 ◽  
Author(s):  
Eleni Mavrogiannou ◽  
Areti Strati ◽  
Aliki Stathopoulou ◽  
Emily G Tsaroucha ◽  
Loukas Kaklamanis ◽  
...  

Abstract Background: We developed and validated a real-time reverse transcription (RT)–PCR for the quantification of 4 individual human telomerase reverse transcriptase (TERT) splice variants (α+β+, α−β+, α+β−, α−β−) in tumor cell lines and non–small cell lung cancer (NSCLC). Methods: We used in silico designed primers and a common TaqMan probe for highly specific amplification of each TERT splice variant, PCR transcript–specific DNA external standards as calibrators, and the MCF-7 cell line for the development and validation of the method. We then quantified TERT splice variants in 6 tumor cell lines and telomerase activity and TERT splice variant expression in cancerous and paired noncancerous tissue samples from 28 NSCLC patients. Results: In most tumor cell lines, we observed little variation in the proportion of TERT splice variants. The α+β− splice variant showed the highest expression and α−β+ and α−β− the lowest. Quantification of the 4 TERT splice variants in NSCLC and surrounding nonneoplastic tissues showed the highest expression percentage for the α+β− variant in both NSCLC and adjacent nonneoplastic tissue samples, followed by α+β+, with the α−β+ and α−β− splice variants having the lowest expression. In the NSCLC tumors, the α+β+ variant had higher expression than other splice variants, and its expression correlated with telomerase activity, overall survival, and disease-free survival. Conclusions: Real-time RT-PCR quantification is a specific, sensitive, and rapid method that can elucidate the biological role of TERT splice variants in tumor development and progression. Our results suggest that the expression of the TERT α+β+ splice variant may be an independent negative prognostic factor for NSCLC patients.


2019 ◽  
Author(s):  
Nicola Bevan ◽  
Tim Jackson ◽  
Clare Szybut ◽  
Lauren Kelsey ◽  
Hinnah Campwala ◽  
...  

2019 ◽  
Author(s):  
Cicely L. Schramm ◽  
Michael L. Bowe ◽  
Laura A. Skerlos ◽  
Grigory S. Filonov ◽  
Yong X. Chen ◽  
...  

2019 ◽  
Author(s):  
Nicola Bevan ◽  
Tim Jackson ◽  
Clare Szybut ◽  
Lauren Kelsey ◽  
Hinnah Campwala ◽  
...  

2019 ◽  
Author(s):  
Cicely L. Schramm ◽  
Michael L. Bowe ◽  
Laura A. Skerlos ◽  
Grigory S. Filonov ◽  
Yong X. Chen ◽  
...  

Blood ◽  
2004 ◽  
Vol 104 (11) ◽  
pp. 4295-4295
Author(s):  
Bei Zhang ◽  
Li-Jun Tie ◽  
Qidong Ye ◽  
Yanxia Zhao ◽  
Long-Jun Gu ◽  
...  

Abstract PAX5 gene is a paired-box PAX gene family member,and encodes the transcription factor BSAP(B-cell specific activator protein) which is a key regulator of B-cell development and differentiation.Dysregulation of PAX5 gene function may contribute to tumorigenesis in lymphoid malignancies.But up to now,a detailed examination of PAX5/BSAP expression in acute leukemia(mainly acute B-lineage lymphoblastic leukemia) has not been reported.In this study,a real-time RT-PCR assay for the relative quantitation of PAX5 and CD19 mRNA expression was developed.It was applied on 6 haematological tumor cell lines and bone marrow cells of 6 normal children,58 previously untreated and 4 relapse acute leukemic children,including 39 cases of B-ALL,10 cases of T-ALL,and 13 cases of AML.PAX5 and CD19 mRNA expression were detected in B-cell lines tested,but almost not in other T- and myeloid cell lines.Among clinical samples,expression of PAX5 mRNA in B-ALL was significantly higher than that in T-ALL and AML(P=0.029 and P=0.013,respectively).PAX5 expression was significantly lower in T-ALL and AML than normal controls.The mRNA levels of PAX5 between T-ALL and AML had not any difference.Individual difference of PAX5 mRNA expression levels in children with B-ALL was great.Because binding sites for BSAP have been identified in the promoters of CD19,the study found that in B-ALL,there was clear correlation between the level of PAX5 expression and that of CD19,which was also studied by real-time RT-PCR.BSAP expression by Western Blotting analysis was also performed in haematological tumor cells,including 6 haematological tumor cell lines and 4 clinical samples(2 cases of B-ALL,1 case of T-ALL,and 1 case of AML).The results of Western Blotting analysis showed a 52-KD BSAP band in B lineage cells,but not in T- and myeloid lineage cells.The intensity of BSAP bands was in accordance with PAX5 mRNA expression level detected by real-time RT-PCR.It was concluded that PAX5 transcripts are readily detectable and quantified in clinical materials with B-ALL by real-time RT-PCR.The strong PAX5 mRNA expression in some B-ALL can be considered to be particularly interesting for further analysis.


2016 ◽  
Author(s):  
Mikael Sebesta ◽  
Peter J. Egelberg ◽  
Anders Langberg ◽  
Jens-Henrik Lindskov ◽  
Kersti Alm ◽  
...  

Author(s):  
Kalpana Patel ◽  
Miniver Oliver ◽  
Nevine Holtz ◽  
Tim Jackson ◽  
Nicholas Dana ◽  
...  

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