Meloidogyne brasiliensis Charchar & Eisenback, 2002 is a junior synonym of M. ethiopica Whitehead, 1968

Nematology ◽  
2017 ◽  
Vol 19 (6) ◽  
pp. 655-669 ◽  
Author(s):  
Jessica M.S. Monteiro ◽  
Juvenil E. Cares ◽  
Valdir R. Correa ◽  
Jadir B. Pinheiro ◽  
Vanessa S. Mattos ◽  
...  
Keyword(s):  
Mass Culture ◽  
Phylogenetic Analyses ◽  
Junior Synonym ◽  
Valid Species ◽  
Bootstrap Support ◽  
Egg Mass ◽  
28S Rrna ◽  
Esterase Isozyme ◽  
Aflp Data ◽  
Type Population

The type population ofMeloidogyne brasiliensisis synonymised underM. ethiopicabased on morphological and morphometric similarities, as well as through biochemical, molecular and phylogenetic studies.Meloidogyne ethiopicawas first described in 1968 in Tanzania using specimens from a single egg mass culture on tomato and re-described in 2004 using an isolate from Brazil.Meloidogyne brasiliensiswas described in 2002 in Brazil based on specimens collected from tomato (type population) and pea. Morphological and morphometric studies of their descriptions showed important similarities in major characters as well as some general variability in others. Characterisation of esterase isozyme phenotypes of three populations ofM. ethiopicafrom Brazil, Chile and Kenya, and twoM. brasiliensispopulations, resulted in only one esterase pattern (E3), a phenotype already known forM. ethiopica. In PCR assays, the species-specific 350 bp SCAR marker developed forM. ethiopicawas amplified from theM. brasiliensispopulations tested. In phylogenetic analyses based either on sequences of the ITS1-5.8S-ITS2 and D2-D3 (28S) rRNA regions or on RAPD and AFLP data, the populations of both species clustered together with a strong bootstrap support. Altogether, these results provide congruent evidence thatM. brasiliensisis not a valid species but rather a junior synonym ofM. ethiopica.

Additional information on Meloidogyne polycephannulata and its proposal as a junior synonym of M. incognita

Nematology ◽  
2019 ◽  
Vol 21 (2) ◽  
pp. 129-146
Author(s):  
Jessica M.S. Monteiro ◽  
Vanessa S. Mattos ◽  
Marcilene F.A. Santos ◽  
Ana C.M.M. Gomes ◽  
Valdir R. Correa ◽  
...  
Keyword(s):  
Morphological Variability ◽  
Junior Synonym ◽  
Valid Species ◽  
Bootstrap Support ◽  
Nominal Species ◽  
Aflp Data ◽  
Morphometric Characters ◽  
Additional Information ◽  
Phylogenetic Studies ◽  
Type Population

Summary The type population of Meloidogyne polycephannulata is synonymised with M. incognita based on morphological and morphometric characters, as well as biochemical, molecular and phylogenetic studies. Morphological variability and a wide host range were reported for M. incognita during its first description and later re-description. Meloidogyne polycephannulata was described in Brazil from specimens collected in a carrot field (type population). The esterase phenotype (Est) characterised for this species was identical to the phenotype Est I2 of M. incognita, the most ubiquitous phenotype used for diagnostics. Morphological and morphometric characters of the descriptions of the two nominal species showed major similarities, as well as variability within the range of variation detected in M. incognita. In PCR assays, three SCAR markers species-specific for M. incognita (incK14 F/R, Mi/FR and incB06 F/R) amplified the same fragments of 399 bp, 955 bp and 1200 bp, respectively, for populations in both species. In phylogenetic studies based either on concatenated sequences of ITS1-5.8S-ITS2, D2-D3 rRNA, mitochondrial COII regions or on RAPD and AFLP data, the populations of both species grouped in the same clade with high bootstrap support. Altogether, these results provide congruent evidence that the M. polycephannulata type isolate deposited at the Embrapa Cryopreserved National Collection of Root-knot Nematodes is not a valid species but rather a junior synonym of M. incognita.

A new amphibious species of the genus Scolopendra Linnaeus, 1758 (Scolopendromorpha, Scolopendridae) from the Ryukyu Archipelago and Taiwan

Zootaxa ◽  
2021 ◽  
Vol 4952 (3) ◽  
pp. 465-494
Author(s):  
SHO TSUKAMOTO ◽  
SHIMPEI F. HIRUTA ◽  
KATSUYUKI EGUCHI ◽  
JHIH-RONG LIAO ◽  
SATOSHI SHIMANO
Keyword(s):  
Phylogenetic Analyses ◽  
Rrna Genes ◽  
Valid Species ◽  
28S Rrna ◽  
Ryukyu Archipelago ◽  
Morphological Examination ◽  
Mitochondrial Coi ◽  
Molecular Phylogenetic ◽  
East And Southeast Asia ◽  
18S Rrna Genes

In Japan and Taiwan, five valid species of the genus Scolopendra Linnaeus, 1758 have been described: S. morsitans Linnaeus, 1758, S. subspinipes Leach, 1816, S. mutilans Koch, 1878, S. japonica Koch, 1878, and S. multidens Newport, 1844. Recently, an undetermined species was found in the Ryukyu Archipelago and Taiwan. Using molecular phylogenetic analyses with mitochondrial COI and 16S rRNA and nuclear 28S rRNA and 18S rRNA genes as well as conventional morphological examination, we successfully discriminated this sixth species as an independent lineage from S. subspinipes, S. mutilans, and other named congeners from East and Southeast Asia. Therefore, the species was described as S. alcyona Tsukamoto & Shimano, sp. nov. Several situational evidences suggest that this species prefers streamside environments and exhibits amphibious behavior. 

Phylogeny of hymenolepidids (Cestoda: Cyclophyllidea) from mammals: sequences of 18S rRNA and COI genes confirm major clades revealed by the 28S rRNA analyses

2021 ◽  
Vol 95 ◽  
Author(s):  
B. Neov ◽  
G.P. Vasileva ◽  
G. Radoslavov ◽  
P. Hristov ◽  
D.T.J. Littlewood ◽  
...  
Keyword(s):  
Ribosomal Rna ◽  
18S Rrna ◽  
Phylogenetic Analyses ◽  
The Other ◽  
Rrna Genes ◽  
Host Switching ◽  
28S Rrna ◽  
Mitochondrial Cytochrome ◽  
Rapid Radiation ◽  
18S Rrna Genes

Abstract The aim of the study is to test a hypothesis for the phylogenetic relationships among mammalian hymenolepidid tapeworms, based on partial (D1–D3) nuclear 28S ribosomal RNA (rRNA) genes, by estimating new molecular phylogenies for the group based on partial mitochondrial cytochrome c oxidase I (COI) and nuclear 18S rRNA genes, as well as a combined analysis using all three genes. New sequences of COI and 18S rRNA genes were obtained for Coronacanthus integrus, C. magnihamatus, C. omissus, C. vassilevi, Ditestolepis diaphana, Lineolepis scutigera, Spasskylepis ovaluteri, Staphylocystis tiara, S. furcata, S. uncinata, Vaucherilepis trichophorus and Neoskrjabinolepis sp. The phylogenetic analyses confirmed the major clades identified by Haukisalmi et al. (Zoologica Scripta 39: 631–641, 2010): Ditestolepis clade, Hymenolepis clade, Rodentolepis clade and Arostrilepis clade. While the Ditestolepis clade is associated with soricids, the structure of the other three clades suggests multiple evolutionary events of host switching between shrews and rodents. Two of the present analyses (18S rRNA and COI genes) show that the basal relationships of the four mammalian clades are branching at the same polytomy with several hymenolepidids from birds (both terrestrial and aquatic). This may indicate a rapid radiation of the group, with multiple events of colonizations of mammalian hosts by avian parasites.

Asian Betylobraconinae (Hymenoptera, Braconidae), with description of a new genus and phylogenetic affinities of the tribe Facitorini

2008 ◽  
Vol 39 (2) ◽  
pp. 133-154 ◽  
Author(s):  
Alberto Sáez ◽  
Kaoru Maeto ◽  
Alejandro Zaldivar-Riverón ◽  
Sergey Belokobylskij
Keyword(s):  
New Species ◽  
Type Species ◽  
New Genus ◽  
Phylogenetic Analyses ◽  
28S Rrna ◽  
Asian Region ◽  
Molecular Phylogenetic ◽  
Phylogenetic Affinities ◽  
One New Species ◽  
Rrna Sequences

AbstractThe taxonomy of the Asian genera of the subfamily Betylobraconinae, a small and understudied group within the hymenopteran family Braconidae, is revised. A new genus exclusively from the Asian region, Asiabregma gen. nov., containing three species (A. ryukyuensis sp. nov. (type species, Japan and Malaya), A. makiharai sp. nov. (Japan) and A. sulaensis (van Achterberg), comb. nov. (Indonesia)) is described. One new species of Aulosaphobracon, A. striatus sp. nov. from Vietnam, and one of Facitorus, F. amamioshimus sp. nov. from Japan, are also described. Based on molecular phylogenetic analyses using COI mtDNA and 28S rRNA sequences, the three genera previously placed in the tribe Facitorini, Facitorus, Conobregma and Jannya, together with Asiabregma gen. nov., are transferred to the rogadine tribe Yeliconini.

scholarly journals The first mitochondrial genome of the genus Exhippolysmata (Decapoda: Caridea: Lysmatidae), with gene rearrangements and phylogenetic associations in Caridea

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Ying-ying Ye ◽  
Jing Miao ◽  
Ya-hong Guo ◽  
Li Gong ◽  
Li-hua Jiang ◽  
...  
Keyword(s):  
Mitochondrial Genome ◽  
Gene Order ◽  
Phylogenetic Analyses ◽  
Complete Mitochondrial Genome ◽  
Bootstrap Support ◽  
Trna Genes ◽  
Gene Rearrangements ◽  
Phylogenetic Studies ◽  
Gc Skew ◽  
Strong Bootstrap Support

AbstractThe complete mitochondrial genome (mitogenome) of animals can provide useful information for evolutionary and phylogenetic analyses. The mitogenome of the genus Exhippolysmata (i.e., Exhippolysmata ensirostris) was sequenced and annotated for the first time, its phylogenetic relationship with selected members from the infraorder Caridea was investigated. The 16,350 bp mitogenome contains the entire set of 37 common genes. The mitogenome composition was highly A + T biased at 64.43% with positive AT skew (0.009) and negative GC skew (− 0.199). All tRNA genes in the E. ensirostris mitogenome had a typical cloverleaf secondary structure, except for trnS1 (AGN), which appeared to lack the dihydrouridine arm. The gene order in the E. ensirostris mitogenome was rearranged compared with those of ancestral decapod taxa, the gene order of trnL2-cox2 changed to cox2-trnL2. The tandem duplication-random loss model is the most likely mechanism for the observed gene rearrangement of E. ensirostris. The ML and BI phylogenetic analyses place all Caridea species into one group with strong bootstrap support. The family Lysmatidae is most closely related to Alpheidae and Palaemonidae. These results will help to better understand the gene rearrangements and evolutionary position of E. ensirostris and lay a foundation for further phylogenetic studies of Caridea.

Taxonomy of the South American genus Pachypops Gill 1861 (Teleostei: Perciformes: Sciaenidae), with the description of a new species

Zootaxa ◽  
2002 ◽  
Vol 26 (1) ◽  
pp. 1 ◽  
Author(s):  
LILIAN CASATTI
Keyword(s):  
New Species ◽  
River Basins ◽  
Junior Synonym ◽  
Valid Species ◽  
Nominal Species ◽  
South American ◽  
The South ◽  
Haemal Spine ◽  
A New Species ◽  
Fin Spines

Pachypops is a South American freshwater sciaenid genus characterized by having two anal-fin spines, three mental barbels, an inferior mouth, a swimbladder with a pair of short appendages anteriorly and a pair of longer appendages projected posteriorly, and the haemal spine of the first caudal distinctly expanded. Three valid Pachypops species are recognized herein. Of the six nominal species previously assigned to Pachypops, two are herein recognized as valid (Perca fourcroi and Micropogon trifilis), two are assigned to other sciaenid genera (Pachypops adspersus and Pachypops cevegei) and two are considered junior synonyms (Corvina biloba and Pachypops camposi). A seventh nominal species, Pachyurus nattereri, formerly considered a valid species of Pachyurus, is determined to be a junior synonym of Pachypops fourcroi, and lectotype and paralectotypes are designated for it. Pachypops fourcroi occurs in the Orinoco, Amazonas, Essequibo, Corantijn, and Approuague River basins, and Pachypops trifilis in rivers of Guyana and middle and lower reaches of the Rio Amazonas basin. A third valid species, Pachypops pigmaeus n. sp., is herein described from tributaries of the Rio Amazonas, Brazil.

scholarly journals Toward a comprehensive taxonomic revision of the “hirculus” group of American Onthophagus Latreille, 1802 (Coleoptera, Scarabaeidae, Scarabaeinae)

2018 ◽  
Author(s):  
Michele Rossini ◽  
Fernando Z. Vaz-de-Mello ◽  
Mario Zunino
Keyword(s):  
Geographic Distribution ◽  
General Scheme ◽  
Taxonomic Revision ◽  
Junior Synonym ◽  
Valid Species ◽  
Species Complexes ◽  
Scarab Beetles

The taxonomy of the American Onthophagus Latreille, 1802 included in the “hirculus” group is revised, and a study of their morphology allows for the delineation of five species-complexes. Herein, we provide a diagnosis of the “hirculus” group, an illustrated key to the complexes, along with a descriptive overview of their taxonomy and geographic distribution. Onthophagus hirculus Mannerheim, 1829 is considered to be a junior synonym of O. hircus Billberg, 1815, which is here demonstrated to be a valid species name. Thus, the “hirculus” group is here renamed the “hircus” group. Furthermore, a general scheme of the genital organs of American Onthophagus is provided, including names of different anatomical parts and a brief discussion on the need for nomenclatural stability for the genitalia of scarab beetles.

scholarly journals Revision of moles in the genus Scapanus

Therya ◽  
2021 ◽  
Vol 12 (2) ◽  
pp. 275-281
Author(s):  
Sergio Ticul Alvarez Castañeda ◽  
Patricia Cortés-Calva
Keyword(s):  
Cytochrome C ◽  
Cytochrome C Oxidase ◽  
Genetic Distances ◽  
Valid Species ◽  
Bootstrap Support ◽  
Oxidase Subunit ◽  
Morphological Studies ◽  
Subspecies Level ◽  
Taxonomic Changes ◽  
Morphological Differences

Scapanus latimanus is a species with many morphological differences among its populations.  This variation is associated with multiple taxonomic changes at the species or subspecies level.  This study incorporates genetic analyses and comparisons with previous morphological studies to propose a better understanding of the latimanus complex.  Mitochondrial markers (cytochrome b; cytochrome c oxidase subunit I; and cytochrome c oxidase subunit III) were sequenced to construct a phylogeny for the subfamily Scalopinae in North America.  Genetic distances ranged from 2.49 to 10.50 % among geographic areas.  Results identified three monophyletic clades with high bootstrap support values.  Based on our phylogenetic analysis and previous morphological analyses, we confirm S. anthonyi from San Pedro Mártir as a valid species and propose that S. occultus from southern California and northern Baja California peninsula be considered as a species

scholarly journals Six new species of the widespread Brazilian millipede genus Eucampesmella (Polydesmida: Chelodesmidae)

2021 ◽  
Vol 38 ◽  
pp. 1-22
Author(s):  
Rodrigo S. Bouzan ◽  
Luiz Felipe M. Iniesta ◽  
João Paulo P. Pena-Barbosa ◽  
Antonio D. Brescovit
Keyword(s):  
New Species ◽  
Type Species ◽  
Rio Grande ◽  
The State ◽  
Junior Synonym ◽  
Valid Species ◽  
Distribution Maps ◽  
Incertae Sedis ◽  
Brazilian Species

This study concerns the diplopod genus Eucampesmella Schubart, 1955, widespread in Brazil. After this work, the genus includes 12 valid species, and three incertae sedis: E. pugiuncula (Schubart, 1946), E. brunnea Kraus, 1959 and E. schubarti Kraus, 1957. The type-species, Eucampesmella tricuspis (Attems, 1931), is redescribed based on the holotype, and the following six new Brazilian species are added: Eucampesmella macunaima sp. nov. from the states of Rondônia, Pará, and Piauí; E. capitu sp. nov. from the states of Piauí and Paraíba; E. brascubas sp. nov. from the state of Sergipe; E. iracema sp. nov. from the state of Pernambuco; E. pedrobala sp. nov. from the state of Ceará; and E. lalla sp. nov. from the state of Rio Grande do Norte. Furthermore, E. lartiguei ferrii (Schubart, 1956) is recognized as a junior synonym of E. lartiguei lartiguei (Silvestri, 1897), which also had its status changed, and E. sulcata (Attems, 1898) is revalidated, prevailing under the name Leptodesmus tuberculiporus Attems, 1898. In addition, drawings, diagnoses, and distribution maps for all species of the genus are provided.

A curious nematode, Diploscapteroides persicus n. sp. (Nematoda: Rhabditida: Rhabditomorpha), from Iran with a note on the status of the male genital papillae

Nematology ◽  
2015 ◽  
Vol 17 (9) ◽  
pp. 1045-1056 ◽  
Author(s):  
Razieh Ghaemi ◽  
Ebrahim Pourjam ◽  
Sergio Álvarez-Ortega ◽  
Majid Pedram ◽  
Mohammad Reza Atighi
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Tail Length ◽  
Molecular Data ◽  
Rrna Genes ◽  
Valid Species ◽  
Female Tail ◽  
The Status ◽  
Species Being ◽  
Male Genital

Diploscapteroides persicus n. sp. is described and illustrated based on morphological, morphometric and molecular data. The new species is mainly characterised by female body length of 469-673 μm, female tail length of 51-99 μm, shape of gubernaculum and spicules and arrangement of male genital papillae. Also, the arrangement of male genital papillae of the new species shows the presence of precloacal papillae, a feature that has not been previously described for the genus. The new species is comparable with all valid species of the genus, namely D. boettgeri, D. brevicauda, D. chitinolabiatus, D. coroniger, D. dacchensis and D. flexuosus, from which the morphological comparisons of the new species with aforementioned species are discussed. Phylogenetic analyses using partial sequences of SSU and LSU rRNA genes were performed for the new species, being the first representative of the genus to be phylogenetically studied using both Bayesian inference (BI) and maximum likelihood (ML) methods, and revealed that D. persicus n. sp. formed a clade with a species of Cephaloboides.

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