Description of Ditylenchus acantholimonis n. sp. (Rhabditida: Anguinidae) from Iran, a morphological and molecular phylogenetic study

Nematology ◽  
2021 ◽  
pp. 1-10
Author(s):  
Samira Aliverdi ◽  
Ebrahim Pourjam ◽  
Majid Pedram
Keyword(s):  
New Species ◽  
Rhizosphere Soil ◽  
Phylogenetic Analyses ◽  
Phylogenetic Study ◽  
Pharyngeal Bulb ◽  
Lateral Field ◽  
Molecular Phylogenetic Study ◽  
Molecular Phylogenetic ◽  
Golestan Province ◽  
Tail Tip

Summary Ditylenchus acantholimonis n. sp. is described based on morphological, morphometric and molecular characters. It was isolated from the rhizosphere soil of Acantholimon sp. in Golestan province, Iran, and is mainly characterised by having four lines in the lateral field, a pyriform to bottle-shaped offset pharyngeal bulb, post-vulval uterine sac 36.6-56.1% of the vulva to anus distance long, and a subcylindrical to conical tail with widely rounded tip. It is further characterised by short to medium-sized females, 480-617 μm long, with a fine stylet having small rounded knobs, V = 80.8-83.6, c = 11.0-13.8, c′ = 3.3-4.6, and males with 16.0-17.0 μm long spicules. The new species was morphologically compared with six species having four lines in their lateral field, rounded tail tip and comparable morphometric data namely: D. dipsacoideus, D. emus, D. exilis, D. paraparvus, D. sturhani, and D. solani. It was also compared with two species, D. ferepolitor and D. angustus, forming a maximally supported clade in the 18S tree. The phylogenetic analyses using the maximal number of Anguinidae and several Sphaerularioidea genera based upon partial 18S and 28S rDNA D2-D3 sequences revealed that Ditylenchus is polyphyletic. In the 18S tree, the new species formed a clade with D. ferepolitor (KJ636374) and D. angustus (AJ966483); in the 28S tree it formed a poorly supported clade with D. phyllobios (KT192618) and Ditylenchus sp. (MG865719).

Molecular phylogenetic study of Bealius Massey & Hinds, 1970 (Nematoda: Hexatylina: Sphaerulariidae), with description of B. pinus n. sp. from Iran

Nematology ◽  
2019 ◽  
Vol 21 (4) ◽  
pp. 435-444
Author(s):  
Mehrab Esmaeili ◽  
Ramin Heydari ◽  
Behrouz Golhasan ◽  
Weimin Ye
Keyword(s):  
New Species ◽  
Nematode Species ◽  
Small Subunit ◽  
Phylogenetic Study ◽  
Pharyngeal Bulb ◽  
Phylogenetic Studies ◽  
Molecular Phylogenetic Study ◽  
Molecular Phylogenetic ◽  
Posterior Extension ◽  
Stylet Length

Summary Bealius pinus n. sp. is described and illustrated based on its morphological, morphometric, and molecular characters. The new species is characterised by a body length of 1040 (920-1124) μm (females) and 985 (990-1043) μm (males), lip region continuous, 7.2 (7.0-8.0) μm broad, 3.3 (3.0-4.0) μm high, stylet length 8.4 (7.0-9.0) μm or ca 1.0-1.3 times the lip region diam., lateral fields with five or six incisures, the outer incisures crenate and inner incisures weakly crenate, and excretory pore situated 156 (141-170) μm from the anterior end. The basal pharyngeal bulb has a short posterior extension projecting dorsally into the intestine. Post-uterine sac absent. Functional males common in the population, spicules 29 (28-30) μm long. Tail cylindrical with broadly rounded terminus in the female and conical, arcuate, completely enveloped by a well-developed bursa in the male. The new species is compared with two known species of the genus, B. bisulcus and B. pissodi. Molecular phylogenetic studies of the new species using partial sequences of small subunit (SSU) rDNA revealed that it forms a clade with several nematode species belonging to genera in the Sphaerularioidea, namely: Sphaerularia, Paurodontella, Nothotylenchus, and Deladenus.

Molecular and morphological characterization of Paurodontoides siddiqii n. sp. (Nematoda: Hexatylina, Sphaerulariidae) associated with bark samples of Pinus eldarica from western Iran

2018 ◽  
Vol 94 ◽  
Author(s):  
M. Esmaeili ◽  
B. Golhasan ◽  
W. Ye ◽  
R. Heydari
Keyword(s):  
New Species ◽  
Excretory Pore ◽  
Phylogenetic Analyses ◽  
Morphological Characterization ◽  
Body Contour ◽  
Pharyngeal Bulb ◽  
Lateral Field ◽  
Molecular Phylogenetic ◽  
Posterior Extension ◽  
Stylet Length

Abstract A new species of Paurodontoides, P. siddiqii n. sp., is described and illustrated based on its morphological, morphometric, and molecular characters. The new species is characterized by a female 550–729 μm long, lip region continuous with body contour, stylet length 7.0–8.0 μm long or c. 1.0–1.2 times the lip region diameter, lateral fields with four smooth incisures, excretory pore at 85–125 μm from anterior end located at the base of the pharyngeal bulb or posterior to it, basal pharyngeal bulb with a short posterior extension projecting into the intestine, monodelphic–prodelphic reproductive system with prominent 19–22 μm long post-uterine sac, and elongate conoid tail with a filiform terminus. The new species is compared with two known species of the genus. It differs from the type species of the genus, P. linfordi, by having slightly shorter stylet, lateral field with smooth incisures, different position of the excretory pore, and absence of male. Compared to P. latus, the new species has a shorter body, shorter stylet, different position of the excretory pore, female tail shape and absence of male. The new species was also compared with close species of the genus Paurodontus because of lateral field marked with four lines, asymmetrical stylet knobs and absence of male. Molecular phylogenetic studies of the new species using partial sequences of 18S rDNA revealed that it forms a clade with a species of the genus Ficotylus. In phylogenetic analyses using partial sequences of the 28S rDNA D2-D3 domain, the new species formed a monophyletic group with a species of the genus Veleshkinema and Sphaerularia spp. (Sphaerulariinae).

Bursaphelenchus rufipennis n. sp. (Nematoda: Parasitaphelenchinae) and redescription of Ektaphelenchus obtusus (Nematoda: Ektaphelenchinae), associates from nematangia on the hind wings of Dendroctonus rufipennis (Coleoptera: Scolytidae)

Nematology ◽  
2008 ◽  
Vol 10 (6) ◽  
pp. 925-955 ◽  
Author(s):  
Natsumi Kanzaki ◽  
Robin M. Giblin-Davis ◽  
Yasmin J. Cardoza ◽  
Weimin Ye ◽  
Kenneth F. Raffa ◽  
...  
Keyword(s):  
New Species ◽  
Morphological Characters ◽  
Morphological Examination ◽  
Dendroctonus Rufipennis ◽  
Lateral Field ◽  
The Past ◽  
Female Tail ◽  
Molecular Phylogenetic ◽  
Voucher Specimens ◽  
Tail Tip

Abstract Two species of aphelench, Bursaphelenchus rufipennis n. sp. and Ektaphelenchus obtusus, were isolated from the 'nematangia', cocoon-like structures found at the base of the hind wings of Dendroctonus rufipennis. The nematangia contained adult females of E. obtusus and the dauer juveniles of B. rufipennis n. sp. Only B. rufipennis n. sp. could be cultured on Monilinia fructicola on LGPDA (lactic acid-treated, glycerol-supplemented, potato dextrose agar). The new species of Bursaphelenchus is described and figured and some additional morphological characters are ascribed to E. obtusus, E. josephi, E. sandiaensis, E. smaelus (= E. prolobos) and E. terebranus after examination of type and/or voucher specimens. Bursaphelenchus rufipennis n. sp. has an adult body length of ca 500-1000 μm, medium a ratios (ca 25-38 for females and ca 30-40 for males), b ratios of ca 8-13 (female) and 7-11 (male), c ratios of ca 15-22 (female and male), c′ ratios of ca 3-4 (female) and ca 2-3 (male), and is characterised by three incisures in the lateral field, mitten-shaped spicules and a conical female tail that curves ventrally and possesses a variable tail tip. The new species is morphologically closest to B. corneolus, B. curvicaudatus, B. gerberae, B. paracorneolus and B. talonus. Morphological examination of type and/or voucher specimens of five Ektaphelenchus species revealed coarse transverse body annulation and three pairs of male caudal papillae (except for the two species where males are not described). Clear typological differences were observed among these five Ektaphelenchus species in the structure of the lip region, presence/absence of stylet knobs and male spicule morphology. Although these characters have not been consistently documented in the past, they may be diagnostic for species in the genus. Molecular phylogenetic analysis based on SSU and D2/D3 LSU sequences revealed that B. rufipennis n. sp. was closest to B. paracorneolus and that E. obtusus was closest to species of Ektaphelenchoides and a Cryptaphelenchus sp.

scholarly journals Death of an order: a comprehensive molecular phylogenetic study confirms that termites are eusocial cockroaches

2007 ◽  
Vol 3 (3) ◽  
pp. 331-335 ◽  
Author(s):  
Daegan Inward ◽  
George Beccaloni ◽  
Paul Eggleton
Keyword(s):  
Social Insects ◽  
Phylogenetic Analyses ◽  
Social Wasps ◽  
Phylogenetic Study ◽  
Social Bees ◽  
Molecular Phylogenetic Study ◽  
Molecular Phylogenetic ◽  
The Tropics

Termites are instantly recognizable mound-builders and house-eaters: their complex social lifestyles have made them incredibly successful throughout the tropics. Although known as ‘white ants’, they are not ants and their relationships with other insects remain unclear. Our molecular phylogenetic analyses, the most comprehensive yet attempted, show that termites are social cockroaches, no longer meriting being classified as a separate order (Isoptera) from the cockroaches (Blattodea). Instead, we propose that they should be treated as a family (Termitidae) of cockroaches. It is surprising to find that a group of wood-feeding cockroaches has evolved full sociality, as other ecologically dominant fully social insects (e.g. ants, social bees and social wasps) have evolved from solitary predatory wasps.

Observations on Malenchus geraerti n. sp. (Rhabditida: Tylenchidae), a morphological and molecular phylogenetic study

Zootaxa ◽  
2018 ◽  
Vol 4369 (3) ◽  
pp. 406 ◽  
Author(s):  
MAJID PEDRAM ◽  
MAHYA SOLEYMANZADEH ◽  
EBRAHIM POURJAM ◽  
MAHYAR MOBASSERI
Keyword(s):  
New Species ◽  
Large Subunit ◽  
Small Subunit ◽  
Phylogenetic Study ◽  
Molecular Characteristics ◽  
Lsu Rdna ◽  
Northern Iran ◽  
Lateral Field ◽  
Molecular Phylogenetic ◽  
Short Body

Malenchus geraerti n. sp., recovered from natural regions of northern Iran, is described and illustrated based on morphological, morphometric and molecular data. The new species is characterized by having females with a short body, an anteriorly wide S-shaped amphidial opening narrowing posteriorly, cuticle with prominent annuli, lateral field a plain band with smooth margins, muscular metacorpus with well-developed valve and corresponding plates, spermatheca filled with small spheroid sperm cells, vulva sunken in body with large epiptygma and no flap, and conical tail tapering gradually to a more or less pointed tip. Males of the new species are characterized by having a short body, tylenchoid spicules, adcloacal bursa with smooth margin and tail similar to that of the female. Morphologically, the new species is similar to five known species of the genus: M. fusiformis, M. machadoi, M. pachycephalus, M. solovjovae and M. undulatus. It most closely resembles M. pachycephalus, but as a cryptic species it can be differentiated using morphological and molecular characteristics. Comparisons with the four other aforementioned species are also discussed. Molecular phylogenetic studies using partial sequences of small and large subunit ribosomal DNA fragments reveal that the new species forms a clade with the species M. neosulcus in the small subunit (SSU) rDNA, and two species of Lelenchus in the large subunit (LSU) rDNA tree. 

A molecular phylogenetic study of two relict species of melanopline grasshoppers

Genome ◽  
2002 ◽  
Vol 45 (2) ◽  
pp. 313-318 ◽  
Author(s):  
W Chapco ◽  
G Litzenberger
Keyword(s):  
Molecular Clock ◽  
Phylogenetic Analyses ◽  
Phylogenetic Study ◽  
Melanoplus Sanguinipes ◽  
Eastern Canada ◽  
Relict Species ◽  
Molecular Phylogenetic Study ◽  
Molecular Phylogenetic ◽  
Mitochondrial Sequences ◽  
The Times

Two species belonging to the large grasshopper genus Melanoplus, Melanoplus gaspesiensis and Melanoplus madeleineae, are thought to have survived in refugia in eastern Canada during the Wisconsin glaciation period and perhaps during earlier glacial episodes as well. It has been proposed that either Melanoplus borealis, which is widely distributed today, or its antecedent gave rise to the two relict species. Our research, based on standard phylogenetic analyses of mitochondrial sequences, examines this claim by establishing the positions of M. gaspesiensis and M. madeleineae within Melanoplus. There is a very close and strongly supported connection between M. madeleineae and M. borealis (d = 1.36%), whereas M. gaspesiensis is more distant from the latter (d = 2.08%) and appears closely aligned with two other species. Molecular clock estimates of the times of separation of M. madeleineae and M. gaspesiensis from M. borealis are 0.68 and 1.04 million years ago, respectively. Within-species diversities of 1.01 and 0.70% for M. madeleineae and M. gaspesiensis, respectively, are of comparable magnitudes to that of the continentally distributed Melanoplus sanguinipes (0.86%), clearly indicating that neither species endured bottleneck effects despite isolation.Key words: grasshopper, Melanoplus, relict species, mtDNA.

Description of a new species of the genus Anguillonema Fuchs, 1938 (Nematoda: Sphaerularioidea) with an identification key to the species

2018 ◽  
Vol 93 (04) ◽  
pp. 504-512
Author(s):  
A. Yaghoubi ◽  
E. Pourjam ◽  
M. Pedram
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Thin Body ◽  
Molecular Characteristics ◽  
Lateral Field ◽  
Phylogenetic Studies ◽  
Sister Clade ◽  
Molecular Phylogenetic ◽  
Morphological Differences ◽  
18S Rdna Sequence

AbstractAnguillonema iranicum n. sp. is described and illustrated as the second species of this genus from Iran, based on morphological, morphometric and molecular characteristics. It is identified by a short, thin body, a continuous lip region, six lines on the lateral field, a short, thin stylet, a posteriorly located pharyngo-intestinal junction to excretory pore, the presence of a post-vulval uterine sac, vulval position at 89% (87.4–89.9%) of body length, an elongate conoid tail with a rounded to pointed tip and not dorsally bent, and common functional males with short spicules and lacking a bursa. Morphological differences between the new species and the three known species of the genus, namely A. amolensis, A. crenati and A. poligraphi, are discussed. Molecular phylogenetic studies of the new species using partial 18S rDNA sequence revealed that it formed a sister clade with three species of Howardula, one species of Anguillonema and one unidentified isolate. In phylogenetic analyses using partial sequences of 28S rDNA D2-D3 segment, the new species formed a clade with two isolates of Parasitylenchus. A key to identification of Anguillonema species is also presented.

Morphological and molecular characterisation of Aphelenchoides primadentus n. sp. (Nematoda: Aphelenchoididae) from northern Iran

Nematology ◽  
2018 ◽  
Vol 20 (2) ◽  
pp. 97-109 ◽  
Author(s):  
Mahyar Mobasseri ◽  
Ebrahim Pourjam ◽  
Majid Pedram
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Small Subunit ◽  
Natural Forests ◽  
Basic Difference ◽  
Northern Iran ◽  
Lateral Field ◽  
Tail Tip ◽  
Genomic Regions ◽  
Species Being

Aphelenchoides primadentusn. sp. is described and illustrated based on its morphological, morphometric and molecular characters. It was recovered from natural forests of northern Iran in association with mosses. The new species is characterised by its body length of 502-613μm in females and 461-564μm in males, presence of three lines in the lateral fields, a low lip region slightly offset by a shallow depression, 11.1-13.8μm long stylet in females, its conus being longer than the shaft (m = 53.0-68.5) and bearing well-developed, rounded basal knobs, the excretory pore located atcaone body diam. posterior to the metacorpus, a conical tail with a multipapillate terminus or with a single, warty, wide mucron-like structure at the tip, and males with 19-22μm long arcuate spicules that lack a well-developed condylus and rostrum. The new species was morphologically compared with species of the genus having three lines in the lateral field and a multipapillate tail tip or tail with warty mucron, namelyA. iranicusandA. heidelbergi. Compared toA. ensete,A. huntensisandA. gorganensis, three species with a multipapillate tail tip or warty mucron at the tail tip, the new species has a basic difference in the number of lines in the lateral field and, compared to two species,A. composticolaandA. petersi, which have three lines in the lateral field and a similar overall morphology, the new species has basic differences in tail tip morphology. The results of phylogenetic analyses using partial sequences of ribosomal small subunit RNA (SSU) and mitochondrial cytochrome c oxidase 1 (COImtDNA) genes revealed there is currently no sequenced species of the genus phylogenetically close to the new species being sequenced for these two genomic and non-genomic regions. The new species forms a clade withA. ritzemabosiin SSU, and three other species,A. besseyi,A. ritzemabosiandA. fujianensis, in theCOItree.

scholarly journals Microcos magnifica (Sparrmanniaceae) a new species of cloudforest tree from Cameroon

PeerJ ◽  
2017 ◽  
Vol 5 ◽  
pp. e4137 ◽  
Author(s):  
Martin Cheek
Keyword(s):  
New Species ◽  
Conservation Status ◽  
Phylogenetic Study ◽  
Herbarium Specimens ◽  
Additional Species ◽  
Systematic Revision ◽  
Molecular Phylogenetic Study ◽  
Molecular Phylogenetic ◽  
Binocular Microscope ◽  
Made In

Background Although many new species to science have been discovered from thousands of specimens resulting from botanical inventories to support conservation management in Cameroon in recent years, additional species remain to be formally evaluated taxonomically and described. These include species from genera which have been taxonomically neglected for many decades in Africa, such as Microcos. Methods This study is based mainly on herbarium specimens and field observations made in Cameroon during a series of botanical surveys. Herbarium material was examined with a Leica Wild M8 dissecting binocular microscope fitted with an eyepiece graticule. Principal Findings Microcos magnifica Cheek (Malvaceae-Grewioideae or Sparrmanniaceae) is described as an Endangered (EN B2 ab(iii)) new tree species from the submontane forests of Cameroon. It is illustrated and described, and its conservation status and taxonomic affinities are assessed. It is the first new Microcos described from Africa in more than 90 years and is unique on the continent in having sculptured fruits. Discussion A systematic revision, with a molecular phylogenetic study, of Microcos Burm. ex L. in Africa is necessary if the affinities of the species, including M. magnifica, are to be reliably established.

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