scholarly journals Construction of a plant-transformation-competent BIBAC library and genome sequence analysis of polyploid Upland cotton (Gossypium hirsutum L.)

BMC Genomics ◽  
2013 ◽  
Vol 14 (1) ◽  
pp. 208 ◽  
Author(s):  
Mi-Kyung Lee ◽  
Yang Zhang ◽  
Meiping Zhang ◽  
Mark Goebel ◽  
Hee Kim ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Gossypium Hirsutum ◽  
Genome Sequence ◽  
Plant Transformation ◽  
Upland Cotton ◽  
Gossypium Hirsutum L ◽  
Genome Sequence Analysis ◽  
Bibac Library

scholarly journals Genome-wide identification and expression analysis of the 2OG-Fe(II) oxygenase gene family in upland cotton (Gossypium hirsutum L.)

2021 ◽  
Author(s):  
Fenglei Sun ◽  
Quanjia Chen ◽  
Qin Chen ◽  
Menghui Jiang ◽  
Qingtao Zeng ◽  
...  
Keyword(s):  
Drought Stress ◽  
Gossypium Hirsutum ◽  
Gene Family ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Upland Cotton ◽  
Gossypium Hirsutum L ◽  
Rf Gene ◽  
Genome Wide

AbstractThe 2OG-Fe(II) oxygenase (RF) family of enzyme proteins can affect bulliform cells and cause leaf curling. However, there are few studies related to this family in cotton, and there has been no systematic analysis of RF genes. Here, we determined 25 RF genes in the complete genome sequence of upland cotton (Gossypium hirsutum L.) and 11 RF genes in the complete genome sequence of Arabidopsis thaliana. Cotton RF proteins can be divided into three categories. Whole genome/fragment and scattered replication events played an important role in the expansion of the RF gene family. qRT-PCR analysis results showed that RF genes respond to drought stress Pairwise comparison results showed that the expression of RF genes in Shi yuan 321 was higher than that in Kui 85–174. Overall, genome-wide identification approach was used to further analyze the related functions of the RF gene family, which may include the response to drought stress, in cotton.

scholarly journals Recurrent Mycobacterium chelonae Skin Infection Unmasked as Factitious Disorder Using Bacterial Whole Genome Sequence Analysis

2020 ◽  
Vol 7 (11) ◽  
Author(s):  
Sarah Flohr ◽  
Alban Ramette ◽  
Philipp K A Agyeman ◽  
Andrea Duppenthaler ◽  
Cordula Scherer ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Genome Sequence ◽  
Surgical Therapy ◽  
Skin Infection ◽  
Whole Genome Sequence ◽  
Factitious Disorder ◽  
Whole Genome ◽  
Mycobacterium Chelonae ◽  
Genome Sequence Analysis ◽  
Adequate Therapy

Abstract Mycobacterium chelonae infections usually resolve with adequate therapy. We report the case of an adolescent with a chronic and progressive M chelonae infection refractory to combined antimicrobial and surgical therapy. Whole genome sequence analysis of consecutive isolates distinguished reinfection from recurrence and contributed to the diagnosis of a factitious disorder.

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